Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD02G1019100 Malus domestica HOM05D000731 ORTHO05D007540 7.2e-30 133.3 68 100.0
Prupe.7G251900 Prunus persica HOM05D000731 ORTHO05D007540 2.8e-26 121.3 63 95.2
Cpa.g.sc277.4 Carica papaya HOM05D000731 ORTHO05D007540 8.2e-26 119.8 63 95.2
MD15G1162900 Malus domestica HOM05D000731 ORTHO05D007540 8.2e-26 119.8 63 95.2
FvH4_1g02110 Fragaria vesca HOM05D000731 ORTHO05D007540 1.1e-25 119.4 63 90.5
FAN19G1220 Fragaria x ananassa HOM05D000731 ORTHO05D007540 1.1e-25 119.4 63 90.5
FAN23G0834 Fragaria x ananassa HOM05D000731 ORTHO05D007540 1.1e-25 119.4 63 90.5
FAN26G1130 Fragaria x ananassa HOM05D000731 ORTHO05D007540 1.1e-25 119.4 63 90.5
Hma1.2p1_0343F.1_g130810 Hydrangea macrophylla HOM05D000731 ORTHO05D007540 1.1e-25 119.4 63 90.5
Cc06_g07720 Coffea canephora HOM05D000731 ORTHO05D007540 1.4e-25 119.0 63 92.1
Lj9A703G35 Lonicera japonica HOM05D000731 ORTHO05D007540 1.8e-25 118.6 61 93.4
Nn8g39624 Nelumbo nucifera HOM05D000731 ORTHO05D007540 2.4e-25 118.2 63 90.5
Eucgr.C00489 Eucalyptus grandis HOM05D000731 ORTHO05D007540 4.1e-25 117.5 63 90.5
Atru.chr7.2002 Acer truncatum HOM05D000731 ORTHO05D007540 5.3e-25 117.1 63 90.5
Nitab4.5_0003587g0050 Nicotiana tabacum HOM05D000731 ORTHO05D007540 5.3e-25 117.1 63 92.1
ClCG11G003440 Citrullus lanatus HOM05D000731 ORTHO05D007540 7.0e-25 116.7 62 88.7
CsaV3_2G003310 Cucumis sativus L. HOM05D000731 ORTHO05D007540 7.0e-25 116.7 63 88.9
DCAR_020894 Daucus carota HOM05D000731 ORTHO05D007540 7.0e-25 116.7 63 90.5
Nitab4.5_0000704g0110 Nicotiana tabacum HOM05D000731 ORTHO05D007540 7.0e-25 116.7 63 90.5
CiPaw.04G177100 Carya illinoinensis HOM05D000731 ORTHO05D007540 9.1e-25 116.3 63 88.9
QL02p090592 Quercus lobata HOM05D000731 ORTHO05D007540 9.1e-25 116.3 62 90.3
Carub.0006s1877 Capsella rubella HOM05D000731 ORTHO05D007540 1.2e-24 115.9 62 88.7
Lj4g0021646 Lotus japonicus HOM05D000731 ORTHO05D007540 1.2e-24 115.9 63 88.9
Sp6g24040 Schrenkiella parvula HOM05D000731 ORTHO05D007540 1.2e-24 115.9 62 90.3
AL6G31940 Arabidopsis lyrata HOM05D000731 ORTHO05D007540 1.6e-24 115.5 62 87.1
Lsat_1_v5_gn_5_93040 Lactuca sativa HOM05D000731 ORTHO05D007540 2.0e-24 115.2 63 88.9
AT5G20380 Arabidopsis thaliana HOM05D000731 ORTHO05D007540 2.6e-24 114.8 62 87.1
MBI14_g31958_MAGBIO Magnolia biondii HOM05D000731 ORTHO05D007540 2.6e-24 114.8 63 88.9
TWI34G0845 Tripterygium wilfordii HOM05D000731 ORTHO05D007540 2.6e-24 114.8 63 87.3
Cfa002272 Carpinus fangiana HOM05D000731 ORTHO05D007540 3.5e-24 114.4 63 87.3
Ciclev10007933m.g Citrus clementina HOM05D000731 ORTHO05D007540 3.5e-24 114.4 63 87.3
ECA234G1709 Erigeron canadensis HOM05D000731 ORTHO05D007540 3.5e-24 114.4 63 87.3
Gohir.A05G013200 Gossypium hirsutum HOM05D000731 ORTHO05D007540 3.5e-24 114.4 63 87.3
Gorai.009G014300 Gossypium raimondii HOM05D000731 ORTHO05D007540 3.5e-24 114.4 63 87.3
Thecc.09G136600 Theobroma cacao HOM05D000731 ORTHO05D007540 3.5e-24 114.4 63 87.3
Actinidia26362 Actinidia chinensis HOM05D000731 ORTHO05D007540 4.5e-24 114.0 63 87.3
CSS0049656 Camellia sinensis var. sinensis HOM05D000731 ORTHO05D007540 4.5e-24 114.0 63 85.7
Solyc07g007560.3 Solanum lycopersicum HOM05D000731 ORTHO05D007540 4.5e-24 114.0 63 87.3
Sopen07g003560 Solanum pennellii HOM05D000731 ORTHO05D007540 4.5e-24 114.0 63 87.3
Zm00001eb320540 Zea mays HOM05D000731 ORTHO05D007540 4.5e-24 114.0 60 93.3
Aa31LG1G14310 Aethionema arabicum HOM05D000731 ORTHO05D007540 5.9e-24 113.6 62 87.1
EL10Ac8g18764 Beta vulgaris HOM05D000731 ORTHO05D007540 5.9e-24 113.6 63 87.3
Migut.K00401 Erythranthe guttata HOM05D000731 ORTHO05D007540 5.9e-24 113.6 63 87.3
RcHm_v2.0_Chr2g0087161 Rosa chinensis HOM05D000731 ORTHO05D007540 5.9e-24 113.6 63 84.1
Sed0027250 Sechium edule HOM05D000731 ORTHO05D007540 5.9e-24 113.6 63 84.1
MSTRG.26330 Avicennia marina HOM05D000731 ORTHO05D007540 7.7e-24 113.2 63 81.0
COL.COLO4_33376 Corchorus olitorius HOM05D000731 ORTHO05D007540 7.7e-24 113.2 63 87.3
TAR625G1481 Trochodendron aralioides HOM05D000731 ORTHO05D007540 7.7e-24 113.2 63 85.7
CAN.G467.10 Capsicum annuum HOM05D000731 ORTHO05D007540 1.0e-23 112.8 63 84.1
Thhalv10013250m.g Eutrema salsugineum HOM05D000731 ORTHO05D007540 1.0e-23 112.8 62 88.7
Hund09306 Selenicereus undatus HOM05D000731 ORTHO05D007540 1.0e-23 112.8 61 88.5
GSVIVG01012850001 Vitis vinifera HOM05D000731 ORTHO05D007540 1.3e-23 112.5 63 87.3
Aqoxy3G00606 Aquilegia oxysepala HOM05D000731 ORTHO05D007540 1.7e-23 112.1 63 84.1
arahy.Tifrunner.gnm1.ann1.65V40T Arachis hypogaea HOM05D000731 ORTHO05D007540 1.7e-23 112.1 63 82.5
Peaxi162Scf00088g00819 Petunia axillaris HOM05D000731 ORTHO05D007540 1.7e-23 112.1 63 85.7
Potri.006G062300 Populus trichocarpa HOM05D000731 ORTHO05D007540 1.7e-23 112.1 63 84.1
PGSC0003DMG400030684 Solanum tuberosum HOM05D000731 ORTHO05D007540 1.7e-23 112.1 63 85.7
BNapus_Darmor_BZH_scaffold_38p01620 Brassica napus HOM05D000731 ORTHO05D007540 2.2e-23 111.7 60 90.0
BraA02t05571Z Brassica rapa HOM05D000731 ORTHO05D007540 2.2e-23 111.7 60 90.0
HPP92_022038 Vanilla planifolia HOM05D000731 ORTHO05D007540 2.2e-23 111.7 63 81.0
Glyma.13G162900 Glycine max HOM05D000731 ORTHO05D007540 2.9e-23 111.3 63 81.0
Lalb_Chr07g0179361 Lupinus albus HOM05D000731 ORTHO05D007540 2.9e-23 111.3 63 82.5
Rhsim03G0252700 Rhododendron simsii HOM05D000731 ORTHO05D007540 2.9e-23 111.3 63 84.1
SalBow1G2698 Salvia bowleyana HOM05D000731 ORTHO05D007540 2.9e-23 111.3 63 85.7
PSO017G0326 Papaver somniferum HOM05D000731 ORTHO05D007540 3.8e-23 110.9 63 85.7
PSO170G6862 Papaver somniferum HOM05D000731 ORTHO05D007540 3.8e-23 110.9 63 85.7
Psat4g035120 Pisum sativum HOM05D000731 ORTHO05D007540 3.8e-23 110.9 63 84.1
Sabra18G0102000 Salix brachista HOM05D000731 ORTHO05D007540 3.8e-23 110.9 63 81.0
SGA_v2.0_scaffold183G39903 Striga asiatica HOM05D000731 ORTHO05D007540 3.8e-23 110.9 63 84.1
TPR.G7977 Trifolium pratense HOM05D000731 ORTHO05D007540 3.8e-23 110.9 63 84.1
arahy.Tifrunner.gnm1.ann1.9TXC7I Arachis hypogaea HOM05D000731 ORTHO05D007540 5.0e-23 110.5 63 82.5
BcaB05g22849 Brassica carinata HOM05D000731 ORTHO05D007540 5.0e-23 110.5 60 88.3
BcaC03g13761 Brassica carinata HOM05D000731 ORTHO05D007540 5.0e-23 110.5 60 88.3
A02p06220 Brassica napus HOM05D000731 ORTHO05D007540 5.0e-23 110.5 60 88.3
BolC2t07039H Brassica oleracea HOM05D000731 ORTHO05D007540 5.0e-23 110.5 60 88.3
Glyma.17G108300 Glycine max HOM05D000731 ORTHO05D007540 5.0e-23 110.5 60 86.7
Sabra06G0044900 Salix brachista HOM05D000731 ORTHO05D007540 5.0e-23 110.5 63 82.5
THA.LOC104815095 Tarenaya hassleriana HOM05D000731 ORTHO05D007540 5.0e-23 110.5 60 86.7
Oeu053519.2 Olea europaea HOM05D000731 ORTHO05D007540 6.5e-23 110.2 63 82.5
HanXRQChr12g0357151 Helianthus annuus HOM05D000731 ORTHO05D007540 8.5e-23 109.8 63 82.5
Manes.06G044700 Manihot esculenta HOM05D000731 ORTHO05D007540 8.5e-23 109.8 63 82.5
Sc08g0006070 Simmondsia chinensis HOM05D000731 ORTHO05D007540 8.5e-23 109.8 59 88.1
Os09g0556400 Oryza sativa ssp. japonica HOM05D000731 ORTHO05D007540 1.1e-22 109.4 62 83.9
Phvul.003G171700 Phaseolus vulgaris HOM05D000731 ORTHO05D007540 1.1e-22 109.4 63 84.1
unitig_899.g15012 Utricularia gibba HOM05D000731 ORTHO05D007540 1.1e-22 109.4 63 84.1
ATR0767G237 Amborella trichopoda HOM05D000731 ORTHO05D007540 1.5e-22 109.0 63 85.7
vmacro06165 Vaccinium macrocarpon HOM05D000731 ORTHO05D007540 1.5e-22 109.0 63 82.5
vmacro22984 Vaccinium macrocarpon HOM05D000731 ORTHO05D007540 1.5e-22 109.0 63 82.5
Medtr4g116030 Medicago truncatula HOM05D000731 ORTHO05D007540 1.9e-22 108.6 63 82.5
CDE05G1074 Ceratophyllum demersum HOM05D000731 ORTHO05D007540 2.5e-22 108.2 60 85.0
VMungo1215G3343 Vigna mungo HOM05D000731 ORTHO05D007540 2.5e-22 108.2 63 82.5
Ca_21641_v3 Cicer arietinum L. HOM05D000731 ORTHO05D007540 3.2e-22 107.8 63 81.0
Potri.018G121600 Populus trichocarpa HOM05D000731 ORTHO05D007540 3.2e-22 107.8 63 77.8
SEGI_14112 Sequoiadendron giganteum HOM05D000731 ORTHO05D007540 1.5e-19 99.0 63 71.4
PGR142G1011 Punica granatum HOM05D000731 ORTHO05D007540 4.4e-19 97.4 52 92.3
Mapoly0135s0018 Marchantia polymorpha HOM05D000731 ORTHO05D007540 2.2e-18 95.1 58 74.1
Pp3c4_4410 Physcomitrium patens HOM05D000731 ORTHO05D007540 2.4e-17 91.7 58 67.2
CBR_g32555 Chara braunii HOM05D000731 ORTHO05D007540 3.1e-17 91.3 58 69.0
AagrBONN_evm.TU.Sc2ySwM_228.4586 Anthoceros agrestis HOM05D000731 ORTHO05D007540 3.5e-16 87.8 58 67.2
MCO07G358 Micromonas commoda HOM05D000731 ORTHO05D007540 7.5e-11 70.1 58 51.7
Cre16.g663600 Chlamydomonas reinhardtii HOM05D000731 ORTHO05D007540 1.2e-08 62.8 59 50.8
Cre09.g396950 Chlamydomonas reinhardtii HOM05D000731 ORTHO05D007540 3.5e-08 61.2 62 43.5
AUR62013262 Chenopodium quinoa HOM05D000731 ORTHO05D007540 7.7e-08 60.1 30 90.0


User provided reference genes

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