Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD02G1016300 Malus domestica HOM05D007673 ORTHO05D009278 1.4e-74 283.1 165 100.0
MD15G1160900 Malus domestica HOM05D007673 ORTHO05D009278 3.3e-52 208.8 165 73.3
Prupe.7G256100 Prunus persica HOM05D007673 ORTHO05D009278 7.6e-33 144.4 178 62.4
FvH4_1g01840 Fragaria vesca HOM05D022859 ORTHO05D009278 3.0e-21 105.9 169 46.2
FAN28G1648 Fragaria x ananassa HOM05D022859 ORTHO05D009278 1.5e-20 103.6 169 45.6
CiPaw.16G118400 Carya illinoinensis HOM05D007673 ORTHO05D009278 7.6e-17 91.3 169 42.0
FAN19G1896 Fragaria x ananassa HOM05D022859 ORTHO05D009278 3.8e-16 89.0 180 39.4
FAN26G0562 Fragaria x ananassa HOM05D022859 ORTHO05D009278 8.4e-16 87.8 195 40.5
TAR383G0338 Trochodendron aralioides HOM05D007673 ORTHO05D009278 9.3e-15 84.3 162 40.1
CiPaw.15G183400 Carya illinoinensis HOM05D007673 ORTHO05D009278 2.1e-14 83.2 163 43.6
COL.COLO4_24126 Corchorus olitorius HOM05D007673 ORTHO05D009278 1.1e-12 77.4 168 35.7
Dinv41432 Davidia involucrata HOM05D007673 ORTHO05D009278 1.5e-12 77.0 164 43.3
Lalb_Chr07g0179441 Lupinus albus HOM05D007673 ORTHO05D009278 3.3e-12 75.9 163 41.7
Potri.006G060000 Populus trichocarpa HOM05D007673 ORTHO05D009278 3.3e-12 75.9 164 45.1
GSVIVG01012874001 Vitis vinifera HOM05D007673 ORTHO05D009278 5.6e-12 75.1 166 44.6
CSS0039366 Camellia sinensis var. sinensis HOM05D007673 ORTHO05D009278 3.7e-11 72.4 158 36.7
Phvul.009G210216 Phaseolus vulgaris HOM05D007673 ORTHO05D009278 3.7e-11 72.4 163 36.2
Sabra06G0043300 Salix brachista HOM05D007673 ORTHO05D009278 3.7e-11 72.4 166 40.4
Actinidia04238 Actinidia chinensis HOM05D007673 ORTHO05D009278 1.1e-10 70.9 163 38.0
TAR625G1436 Trochodendron aralioides HOM05D007673 ORTHO05D009278 1.1e-10 70.9 161 39.1
Nn8g39681 Nelumbo nucifera HOM05D007673 ORTHO05D009278 2.4e-10 69.7 161 42.2
Lalb_Chr13g0301271 Lupinus albus HOM05D007673 ORTHO05D009278 4.0e-10 68.9 161 37.3
Manes.14G120200 Manihot esculenta HOM05D007673 ORTHO05D009278 5.3e-10 68.6 162 44.4
Glyma.17G106100 Glycine max HOM05D007673 ORTHO05D009278 6.9e-10 68.2 162 37.0
Thecc.09G139900 Theobroma cacao HOM05D007673 ORTHO05D009278 9.0e-10 67.8 159 40.3
Dinv43178 Davidia involucrata HOM05D007673 ORTHO05D009278 1.2e-09 67.4 161 34.2
Nn2g12220 Nelumbo nucifera HOM05D007673 ORTHO05D009278 7.6e-09 64.7 161 42.2
TWI34G1167 Tripterygium wilfordii HOM05D007673 ORTHO05D009278 7.6e-09 64.7 171 35.7
Manes.06G043400 Manihot esculenta HOM05D007673 ORTHO05D009278 1.0e-08 64.3 162 37.7
QL02p091069 Quercus lobata HOM05D007673 ORTHO05D009278 1.3e-08 63.9 160 44.4
Glyma.13G165000 Glycine max HOM05D007673 ORTHO05D009278 1.7e-08 63.5 161 35.4
arahy.Tifrunner.gnm1.ann1.5L22XG Arachis hypogaea HOM05D007673 ORTHO05D009278 2.2e-08 63.2 166 36.7
Actinidia21918 Actinidia chinensis HOM05D007673 ORTHO05D009278 3.8e-08 62.4 166 41.6
Medtr4g116360 Medicago truncatula HOM05D007673 ORTHO05D009278 3.8e-08 62.4 168 35.1
TWI32G1294 Tripterygium wilfordii HOM05D007673 ORTHO05D009278 3.8e-08 62.4 162 36.4
Aqoxy7G03558 Aquilegia oxysepala HOM05D007673 ORTHO05D009278 4.9e-08 62.0 165 34.5
Cc06_g07510 Coffea canephora HOM05D007673 ORTHO05D009278 1.1e-07 60.8 169 39.1
Gohir.A05G012100 Gossypium hirsutum HOM05D007673 ORTHO05D009278 1.1e-07 60.8 164 42.1
Gohir.D05G013100 Gossypium hirsutum HOM05D007673 ORTHO05D009278 1.9e-07 60.1 164 41.5
Gorai.009G013100 Gossypium raimondii HOM05D007673 ORTHO05D009278 1.9e-07 60.1 164 41.5
Peaxi162Scf00088g00016 Petunia axillaris HOM05D007673 ORTHO05D009278 2.5e-07 59.7 162 42.0
Phvul.003G173600 Phaseolus vulgaris HOM05D007673 ORTHO05D009278 2.5e-07 59.7 164 34.1
Oeu055924.1 Olea europaea HOM05D007673 ORTHO05D009278 5.5e-07 58.5 157 34.4
Potri.018G115601 Populus trichocarpa HOM05D007673 ORTHO05D009278 5.5e-07 58.5 163 39.9
Rhsim01G0051900 Rhododendron simsii HOM05D007673 ORTHO05D009278 5.5e-07 58.5 184 34.2
VMungo1309G0908 Vigna mungo HOM05D007673 ORTHO05D009278 7.1e-07 58.2 165 35.2
Lsat_1_v5_gn_7_45981 Lactuca sativa HOM05D007673 ORTHO05D009278 9.3e-07 57.8 156 34.0
MBI14_g03622_MAGBIO Magnolia biondii HOM05D007673 ORTHO05D009278 9.3e-07 57.8 171 35.1
VMungo1215G2163 Vigna mungo HOM05D007673 ORTHO05D009278 2.1e-06 56.6 160 33.1
Lj6g0015094 Lotus japonicus HOM05D007673 ORTHO05D009278 7.9e-06 54.7 160 33.8
Medtr2g450420 Medicago truncatula HOM05D007673 ORTHO05D009278 7.9e-06 54.7 167 30.5


User provided reference genes

Program Settings