Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD02G1006400 Malus domestica HOM05D003426 ORTHO05D003816 1.8e-246 855.9 572 100.0
MD15G1151400 Malus domestica HOM05D003426 ORTHO05D003816 1.9e-168 596.7 574 65.9
MD17G1259500 Malus domestica HOM05D003426 ORTHO05D003816 4.5e-93 346.3 487 47.6
Prupe.7G264500 Prunus persica HOM05D003426 ORTHO05D003816 9.2e-70 268.9 360 52.5
RcHm_v2.0_Chr2g0085511 Rosa chinensis HOM05D003426 ORTHO05D003816 2.7e-61 240.7 517 39.8
FAN23G3106 Fragaria x ananassa HOM05D003426 ORTHO05D003816 2.9e-55 220.7 497 40.4
FAN26G0769 Fragaria x ananassa HOM05D003426 ORTHO05D003816 4.9e-55 219.9 490 40.0
Cfa020810 Carpinus fangiana HOM05D003426 ORTHO05D003816 1.9e-51 208.0 371 43.7
Potri.006G182601 Populus trichocarpa HOM05D003426 ORTHO05D003816 2.8e-50 204.1 378 40.2
FAN28G0527 Fragaria x ananassa HOM05D003426 ORTHO05D003816 1.2e-48 198.7 354 42.7
FvH4_1g00800 Fragaria vesca HOM05D003426 ORTHO05D003816 2.0e-48 198.0 369 42.8
Haze_19169 Corylus avellana HOM05D003426 ORTHO05D003816 5.4e-46 189.9 563 34.6
CiPaw.15G166800 Carya illinoinensis HOM05D003426 ORTHO05D003816 6.0e-45 186.4 374 40.9
Thecc.09G028500 Theobroma cacao HOM05D003426 ORTHO05D003816 2.3e-44 184.5 371 38.8
Dinv43256 Davidia involucrata HOM05D003426 ORTHO05D003816 9.0e-41 172.6 395 39.5
Duzib168G0934 Durio zibethinus HOM05D003426 ORTHO05D003816 4.9e-39 166.8 362 38.7
Atru.chr7.23 Acer truncatum HOM05D003426 ORTHO05D003816 4.2e-38 163.7 398 35.9
Manes.06G035400 Manihot esculenta HOM05D003426 ORTHO05D003816 7.1e-38 162.9 382 37.2
Eucgr.C00251 Eucalyptus grandis HOM05D003426 ORTHO05D003816 9.3e-38 162.5 372 37.1
Sabra06G0139100 Salix brachista HOM05D003426 ORTHO05D003816 4.6e-37 160.2 493 31.4
Cpa.g.sc46.169 Carica papaya HOM05D003426 ORTHO05D003816 7.9e-37 159.5 370 37.0
TWI34G0373 Tripterygium wilfordii HOM05D003426 ORTHO05D003816 7.9e-37 159.5 358 37.7
Manes.14G144800 Manihot esculenta HOM05D003426 ORTHO05D003816 1.3e-36 158.7 376 36.7
COL.COLO4_18823 Corchorus olitorius HOM05D003426 ORTHO05D003816 2.3e-36 157.9 338 37.0
Dinv42844 Davidia involucrata HOM05D003426 ORTHO05D003816 3.3e-35 154.1 353 37.4
Actinidia23556 Actinidia chinensis HOM05D003426 ORTHO05D003816 1.6e-34 151.8 390 33.8
CiPaw.16G108300 Carya illinoinensis HOM05D003426 ORTHO05D003816 1.6e-34 151.8 433 34.4
Hma1.2p1_0028F.1_g017630 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 1.4e-33 148.7 364 35.7
TAR626G1511 Trochodendron aralioides HOM05D003426 ORTHO05D003816 1.8e-33 148.3 386 36.3
Rhsim01G0028100 Rhododendron simsii HOM05D003426 ORTHO05D003816 1.7e-31 141.7 360 35.3
AUR62025323 Chenopodium quinoa HOM05D003426 ORTHO05D003816 5.0e-31 140.2 403 33.7
AUR62028339 Chenopodium quinoa HOM05D003426 ORTHO05D003816 8.4e-31 139.4 398 34.9
CANSAT11G1136 Cannabis sativa HOM05D003426 ORTHO05D003816 1.1e-30 139.0 338 34.3
Cc06_g14810 Coffea canephora HOM05D003426 ORTHO05D003816 1.4e-30 138.7 351 36.2
MSTRG.6152 Avicennia marina HOM05D003426 ORTHO05D003816 1.9e-30 138.3 362 33.4
Lj9C718T11 Lonicera japonica HOM05D003426 ORTHO05D003816 7.2e-30 136.3 383 35.2
Ca_21135_v3 Cicer arietinum L. HOM05D003426 ORTHO05D003816 2.7e-29 134.4 395 33.4
Ca_21137_v3 Cicer arietinum L. HOM05D003426 ORTHO05D003816 2.7e-29 134.4 395 33.4
CAN.G160.49 Capsicum annuum HOM05D003426 ORTHO05D003816 1.8e-28 131.7 385 33.8
Gohir.A07G027500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 1.8e-28 131.7 337 34.1
PGR142G3879 Punica granatum HOM05D003426 ORTHO05D003816 3.9e-28 130.6 355 33.5
Gorai.001G032900 Gossypium raimondii HOM05D003426 ORTHO05D003816 6.7e-28 129.8 337 33.8
vmacro16795 Vaccinium macrocarpon HOM05D003426 ORTHO05D003816 1.9e-27 128.3 356 34.8
Peaxi162Scf00401g00417 Petunia axillaris HOM05D003426 ORTHO05D003816 2.5e-27 127.9 412 31.1
Gohir.D07G031500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 3.3e-27 127.5 337 33.5
MSTRG.26266 Avicennia marina HOM05D003426 ORTHO05D003816 4.3e-27 127.1 355 33.8
PGSC0003DMG400011187 Solanum tuberosum HOM05D003426 ORTHO05D003816 7.4e-27 126.3 427 32.8
Oeu021305.2 Olea europaea HOM05D003426 ORTHO05D003816 4.8e-26 123.6 356 32.9
TAR636G1172 Trochodendron aralioides HOM05D003426 ORTHO05D003816 8.2e-26 122.9 292 37.7
Oeu026460.1 Olea europaea HOM05D003426 ORTHO05D003816 1.4e-25 122.1 352 32.4
HanXRQChr05g0144001 Helianthus annuus HOM05D003426 ORTHO05D003816 5.3e-25 120.2 363 33.6
CSS0024837 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 1.2e-24 119.0 211 40.8
Hma1.2p1_2680F.1_g326790 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 1.2e-24 119.0 221 42.5
EL10Ac8g18943 Beta vulgaris HOM05D003426 ORTHO05D003816 1.5e-24 118.6 398 33.7
Solyc07g005700.3 Solanum lycopersicum HOM05D003426 ORTHO05D003816 1.5e-24 118.6 424 32.3
Hund08921 Selenicereus undatus HOM05D003426 ORTHO05D003816 2.0e-24 118.2 370 33.8
Sopen07g001810 Solanum pennellii HOM05D003426 ORTHO05D003816 1.0e-23 115.9 422 32.0
PSO210G1729 Papaver somniferum HOM05D003426 ORTHO05D003816 1.7e-23 115.2 340 32.4
Ah.09g228830 Amaranthus hybridus HOM05D006517 ORTHO05D007886 2.2e-23 114.8 384 33.9
Sed0021282 Sechium edule HOM05D003426 ORTHO05D003816 2.9e-23 114.4 327 32.1
PSO210G2240 Papaver somniferum HOM05D003426 ORTHO05D003816 8.5e-23 112.8 367 30.0
Nn2g12424 Nelumbo nucifera HOM05D003426 ORTHO05D003816 4.2e-22 110.5 334 32.9
Aqoxy7G03377 Aquilegia oxysepala HOM05D003426 ORTHO05D003816 3.6e-21 107.5 381 28.6
Lsat_1_v5_gn_8_63641 Lactuca sativa HOM05D003426 ORTHO05D003816 6.1e-21 106.7 380 29.7
Nitab4.5_0001571g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 1.4e-20 105.5 248 35.9
arahy.Tifrunner.gnm1.ann1.N5DK6E Arachis hypogaea HOM05D003426 ORTHO05D003816 1.5e-19 102.1 337 30.3
Actinidia38667 Actinidia chinensis HOM05D003426 ORTHO05D003816 2.5e-19 101.3 299 33.4
Glyma.02G205001 Glycine max HOM05D003426 ORTHO05D003816 2.5e-19 101.3 349 28.1
arahy.Tifrunner.gnm1.ann1.H6N2T4 Arachis hypogaea HOM05D003426 ORTHO05D003816 3.3e-19 100.9 323 30.3
Lj7P460T26 Lonicera japonica HOM05D003426 ORTHO05D003816 5.7e-19 100.1 199 37.7
SalBow1G0569 Salvia bowleyana HOM05D003426 ORTHO05D003816 1.1e-17 95.9 356 29.8
TAR625G0621 Trochodendron aralioides HOM05D003426 ORTHO05D003816 1.4e-17 95.5 369 30.9
Nn8g39953 Nelumbo nucifera HOM05D003426 ORTHO05D003816 2.4e-17 94.7 354 29.1
Nitab4.5_0005869g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 2.4e-17 94.7 234 35.5
Lalb_Chr13g0300811 Lupinus albus HOM05D003426 ORTHO05D003816 3.1e-17 94.4 337 32.3
Dinv08190 Davidia involucrata HOM05D003426 ORTHO05D003816 9.1e-17 92.8 367 29.7
MELO3C010212.2 Cucumis melo HOM05D003426 ORTHO05D003816 2.6e-16 91.3 343 27.7
Lalb_Chr12g0198761 Lupinus albus HOM05D003426 ORTHO05D003816 2.6e-16 91.3 187 38.5
QL02p093542 Quercus lobata HOM05D001418 ORTHO05D002038 2.6e-16 91.3 86 58.1
THA.LOC104803917 Tarenaya hassleriana HOM05D003426 ORTHO05D003816 4.5e-16 90.5 376 29.3
Psat4g009920 Pisum sativum HOM05D003426 ORTHO05D003816 1.0e-15 89.4 281 34.5
SGA_v2.0_scaffold265G46098 Striga asiatica HOM05D003426 ORTHO05D003816 1.3e-15 89.0 323 28.5
Sc14g0000930 Simmondsia chinensis HOM05D003426 ORTHO05D003816 1.7e-15 88.6 367 30.0
Psat4g010040 Pisum sativum HOM05D003426 ORTHO05D003816 5.0e-15 87.0 178 36.5
PGSC0003DMG400037110 Solanum tuberosum HOM05D003426 ORTHO05D003816 5.0e-15 87.0 205 33.2
PSO561G0041 Papaver somniferum HOM05D003426 ORTHO05D003816 6.5e-15 86.7 406 27.8
Rhsim02G0212600 Rhododendron simsii HOM05D003426 ORTHO05D003816 8.5e-15 86.3 371 25.9
ClCG02G014420 Citrullus lanatus HOM05D003426 ORTHO05D003816 1.4e-14 85.5 341 27.6
Actinidia10526 Actinidia chinensis HOM05D003426 ORTHO05D003816 2.5e-14 84.7 367 25.9
CsaV3_2G007580 Cucumis sativus L. HOM05D003426 ORTHO05D003816 2.5e-14 84.7 364 28.0
PGSC0003DMG400040160 Solanum tuberosum HOM05D003426 ORTHO05D003816 3.2e-14 84.3 336 30.1
Medtr4g130690 Medicago truncatula HOM05D003426 ORTHO05D003816 4.2e-14 84.0 473 26.8
Glyma.17G072650 Glycine max HOM05D003426 ORTHO05D003816 7.2e-14 83.2 222 34.7
Dinv17422 Davidia involucrata HOM05D003426 ORTHO05D003816 1.2e-13 82.4 201 32.8
Psat4g009680 Pisum sativum HOM05D003426 ORTHO05D003816 2.1e-13 81.6 135 42.2
PSO111G0039 Papaver somniferum HOM05D003426 ORTHO05D003816 2.7e-13 81.3 401 28.2
MELO3C004128.2 Cucumis melo HOM05D003426 ORTHO05D003816 4.7e-13 80.5 353 29.2
ECA236G2514 Erigeron canadensis HOM05D003426 ORTHO05D003816 4.7e-13 80.5 406 27.6
Medtr3g045840 Medicago truncatula HOM05D003426 ORTHO05D003816 7.9e-13 79.7 171 38.6
ClCG06G012490 Citrullus lanatus HOM05D003426 ORTHO05D003816 1.4e-12 79.0 339 28.0
HanXRQChr10g0313661 Helianthus annuus HOM05D003426 ORTHO05D003816 1.4e-12 79.0 197 33.0
Glyma.17G184200 Glycine max HOM05D003426 ORTHO05D003816 1.8e-12 78.6 221 29.4
Lj4g0006994 Lotus japonicus HOM05D003426 ORTHO05D003816 3.0e-12 77.8 346 28.0
Migut.J01365 Erythranthe guttata HOM05D003426 ORTHO05D003816 5.1e-12 77.0 356 28.9
Medtr4g129690 Medicago truncatula HOM05D003426 ORTHO05D003816 5.1e-12 77.0 270 30.4
Rhsim03G0257700 Rhododendron simsii HOM05D003426 ORTHO05D003816 5.1e-12 77.0 278 32.0
Phvul.003G155200 Phaseolus vulgaris HOM05D003426 ORTHO05D003816 6.7e-12 76.6 397 27.7
Actinidia38316 Actinidia chinensis HOM05D003426 ORTHO05D003816 1.1e-11 75.9 377 28.1
vmacro06066 Vaccinium macrocarpon HOM05D003426 ORTHO05D003816 1.1e-11 75.9 206 34.0
PGSC0003DMG400036381 Solanum tuberosum HOM05D003426 ORTHO05D003816 1.5e-11 75.5 332 28.0
MBI14_g30955_MAGBIO Magnolia biondii HOM05D003426 ORTHO05D003816 3.3e-11 74.3 338 30.5
Sed0007563 Sechium edule HOM05D003426 ORTHO05D003816 3.3e-11 74.3 336 25.6
CiPaw.16G108200 Carya illinoinensis HOM05D003426 ORTHO05D003816 4.4e-11 73.9 206 35.0
CSS0012807 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 5.7e-11 73.6 186 34.9
Glyma.17G072900 Glycine max HOM05D003426 ORTHO05D003816 5.7e-11 73.6 348 26.7
PGSC0003DMG400040189 Solanum tuberosum HOM05D003426 ORTHO05D003816 7.4e-11 73.2 203 31.0
DCAR_019401 Daucus carota HOM05D003426 ORTHO05D003816 1.7e-10 72.0 212 31.1
ATR0580G137 Amborella trichopoda HOM05D003426 ORTHO05D003816 2.2e-10 71.6 197 31.0
Lj4g0000658 Lotus japonicus HOM05D003426 ORTHO05D003816 2.2e-10 71.6 327 26.6
QL02p093555 Quercus lobata HOM05D003426 ORTHO05D003816 2.2e-10 71.6 139 38.8
PSO675G1450 Papaver somniferum HOM05D003426 ORTHO05D003816 2.8e-10 71.2 283 28.6
Glyma.17G073000 Glycine max HOM05D003426 ORTHO05D003816 3.7e-10 70.9 353 28.6
Psat6g228520 Pisum sativum HOM05D003426 ORTHO05D003816 3.7e-10 70.9 142 35.9
QL02p093534 Quercus lobata HOM05D003426 ORTHO05D003816 3.7e-10 70.9 148 39.2
TPR.G24886 Trifolium pratense HOM05D003426 ORTHO05D003816 4.8e-10 70.5 309 25.9
Nitab4.5_0000123g0610 Nicotiana tabacum HOM05D003426 ORTHO05D007302 8.2e-10 69.7 195 32.8
SGA_v2.0_scaffold1435G53950 Striga asiatica HOM05D003426 ORTHO05D003816 1.4e-09 68.9 225 30.2
Phvul.010G050200 Phaseolus vulgaris HOM05D003426 ORTHO05D003816 4.1e-09 67.4 205 32.7
Solyc10g048140.2 Solanum lycopersicum HOM05D003426 ORTHO05D003816 4.1e-09 67.4 244 27.9
EL10Ac2g02492 Beta vulgaris HOM05D016866 ORTHO05D003816 5.3e-09 67.0 228 29.4
AUR62024799 Chenopodium quinoa HOM05D016866 ORTHO05D003816 7.0e-09 66.6 349 27.5
Sed0023941 Sechium edule HOM05D003426 ORTHO05D003816 1.2e-08 65.9 233 27.9
Actinidia02402 Actinidia chinensis HOM05D000650 ORTHO05D007302 1.6e-08 65.5 181 29.8
Sopen10g019310 Solanum pennellii HOM05D003426 ORTHO05D003816 2.0e-08 65.1 207 28.5
MBI15_g18232_MAGBIO Magnolia biondii HOM05D003426 ORTHO05D003816 2.6e-08 64.7 374 26.5
VMungo1215G0444 Vigna mungo HOM05D003426 ORTHO05D003816 3.5e-08 64.3 236 26.3
SGA_v2.0_scaffold12G06013 Striga asiatica HOM05D003426 ORTHO05D003816 5.9e-08 63.5 97 39.2
Glyma.17G072800 Glycine max HOM05D003426 ORTHO05D003816 7.7e-08 63.2 79 46.8
CSS0027727 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 1.0e-07 62.8 241 28.2
Carub.0004s0319 Capsella rubella HOM05D012895 ORTHO05D014428 1.0e-07 62.8 359 24.2
Glyma.17G193101 Glycine max HOM05D003426 ORTHO05D003816 1.0e-07 62.8 79 46.8
Sc18g0002970 Simmondsia chinensis HOM05D003426 ORTHO05D003816 1.0e-07 62.8 362 27.9
Nitab4.5_0011705g0030 Nicotiana tabacum HOM05D003426 ORTHO05D003816 2.2e-07 61.6 65 53.8
Cpa.g.sc20.26 Carica papaya HOM05D000650 ORTHO05D000735 3.8e-07 60.8 190 28.4
Lsat_1_v5_gn_5_90221 Lactuca sativa HOM05D029854 ORTHO05D003816 3.8e-07 60.8 190 28.4
Nitab4.5_0002290g0120 Nicotiana tabacum HOM05D003426 ORTHO05D003816 3.8e-07 60.8 199 32.2
Dinv24138 Davidia involucrata HOM05D000650 ORTHO05D007302 5.0e-07 60.5 211 26.1
AUR62032422 Chenopodium quinoa HOM05D016866 ORTHO05D003816 6.5e-07 60.1 221 26.2
PSO675G7028 Papaver somniferum HOM05D003426 ORTHO05D003816 6.5e-07 60.1 198 31.3
RhsimUnG0162700 Rhododendron simsii HOM05D022929 ORTHO05D050680 8.5e-07 59.7 404 22.0
QL09p018396 Quercus lobata HOM05D000650 ORTHO05D010020 1.5e-06 58.9 101 42.6
Duzib248G1171 Durio zibethinus HOM05D000650 ORTHO05D007302 2.5e-06 58.2 216 29.2
Sed0017290 Sechium edule HOM05D003426 ORTHO05D003816 2.5e-06 58.2 210 26.7
TAR625G0266 Trochodendron aralioides HOM05D000650 ORTHO05D003816 2.5e-06 58.2 184 31.0
CDE02G2039 Ceratophyllum demersum HOM05D051348 ORTHO05D003816 3.2e-06 57.8 238 28.2
Prupe.8G072900 Prunus persica HOM05D000650 ORTHO05D007302 4.2e-06 57.4 211 26.5
Cfa005605 Carpinus fangiana HOM05D004981 ORTHO05D005635 7.2e-06 56.6 212 27.8
Sc11g0003460 Simmondsia chinensis HOM05D003426 ORTHO05D003816 9.4e-06 56.2 57 54.4


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