Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD01G1187500 Malus domestica HOM05D007196 ORTHO05D009100 1.5e-65 252.7 124 100.0
Prupe.2G283900 Prunus persica HOM05D007196 ORTHO05D009100 2.0e-46 189.1 131 77.1
FAN03G0205 Fragaria x ananassa HOM05D007196 ORTHO05D009100 7.9e-35 150.6 132 65.2
FAN10G3863 Fragaria x ananassa HOM05D007196 ORTHO05D009100 1.4e-34 149.8 132 64.4
RcHm_v2.0_Chr1g0375291 Rosa chinensis HOM05D007196 ORTHO05D009100 2.3e-34 149.1 131 64.9
FAN06G1802 Fragaria x ananassa HOM05D007196 ORTHO05D009100 3.9e-34 148.3 132 63.6
FAN06G4298 Fragaria x ananassa HOM05D007196 ORTHO05D009100 6.7e-34 147.5 132 63.6
FvH4_7g28320 Fragaria vesca HOM05D007196 ORTHO05D009100 3.3e-33 145.2 132 62.1
Cfa008239 Carpinus fangiana HOM05D007196 ORTHO05D009100 5.7e-33 144.4 130 63.8
Potri.015G132500 Populus trichocarpa HOM05D007196 ORTHO05D009100 1.7e-32 142.9 74 87.8
Thecc.03G163500 Theobroma cacao HOM05D007196 ORTHO05D009100 2.2e-32 142.5 81 82.7
Potri.012G130600 Populus trichocarpa HOM05D007196 ORTHO05D009100 2.8e-32 142.1 74 87.8
Sabra12G0098300 Salix brachista HOM05D007196 ORTHO05D009100 3.7e-32 141.7 92 76.1
vmacro06759 Vaccinium macrocarpon HOM05D007196 ORTHO05D009100 4.8e-32 141.4 127 64.6
CiPaw.03G098100 Carya illinoinensis HOM05D007196 ORTHO05D009100 6.3e-32 141.0 124 59.7
Actinidia13526 Actinidia chinensis HOM05D007196 ORTHO05D009100 1.1e-31 140.2 123 64.2
Duzib068G1365 Durio zibethinus HOM05D007196 ORTHO05D009100 1.1e-31 140.2 81 80.2
COL.COLO4_14199 Corchorus olitorius HOM05D007196 ORTHO05D009100 1.8e-31 139.4 130 61.5
Eucgr.K00137 Eucalyptus grandis HOM05D007196 ORTHO05D009100 1.8e-31 139.4 84 77.4
GSVIVG01018482001 Vitis vinifera HOM05D007196 ORTHO05D009100 1.8e-31 139.4 103 71.8
Duzib205G0862 Durio zibethinus HOM05D007196 ORTHO05D009100 2.4e-31 139.0 81 80.2
Duzib205G1842 Durio zibethinus HOM05D007196 ORTHO05D009100 2.4e-31 139.0 81 80.2
MELO3C005405.2 Cucumis melo HOM05D007196 ORTHO05D009100 9.1e-31 137.1 102 68.6
Glyma.09G152100 Glycine max HOM05D007196 ORTHO05D009100 9.1e-31 137.1 122 59.8
Phvul.004G125800 Phaseolus vulgaris HOM05D007196 ORTHO05D009100 1.2e-30 136.7 123 61.8
Ciclev10006560m.g Citrus clementina HOM05D007196 ORTHO05D009100 1.6e-30 136.3 74 86.5
CsaV3_5G005490 Cucumis sativus L. HOM05D007196 ORTHO05D009100 2.0e-30 136.0 103 68.9
Rhsim03G0172900 Rhododendron simsii HOM05D007196 ORTHO05D009100 2.0e-30 136.0 124 61.3
Glyma.16G203100 Glycine max HOM05D007196 ORTHO05D009100 2.6e-30 135.6 82 79.3
Gorai.007G009100 Gossypium raimondii HOM05D007196 ORTHO05D009100 2.6e-30 135.6 124 58.1
CSS0025032 Camellia sinensis var. sinensis HOM05D007196 ORTHO05D009100 3.5e-30 135.2 88 75.0
Gohir.A11G008400 Gossypium hirsutum HOM05D007196 ORTHO05D009100 3.5e-30 135.2 108 66.7
Gohir.D11G007600 Gossypium hirsutum HOM05D007196 ORTHO05D009100 3.5e-30 135.2 126 59.5
Manes.14G032200 Manihot esculenta HOM05D007196 ORTHO05D009100 4.5e-30 134.8 71 85.9
Sed0001882 Sechium edule HOM05D007196 ORTHO05D009100 4.5e-30 134.8 85 77.6
TWI14G0139 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 4.5e-30 134.8 82 76.8
HanXRQChr07g0206311 Helianthus annuus HOM05D007196 ORTHO05D009100 7.7e-30 134.0 74 82.4
THA.LOC104811505 Tarenaya hassleriana HOM05D007196 ORTHO05D009100 7.7e-30 134.0 105 65.7
AT5G51720 Arabidopsis thaliana HOM05D007196 ORTHO05D009100 1.0e-29 133.7 106 66.0
CAN.G1481.5 Capsicum annuum HOM05D007196 ORTHO05D009100 1.0e-29 133.7 88 76.1
Lj2g0025497 Lotus japonicus HOM05D007196 ORTHO05D009100 1.0e-29 133.7 125 58.4
Dinv08000 Davidia involucrata HOM05D007196 ORTHO05D009100 1.3e-29 133.3 125 62.4
AL8G25980 Arabidopsis lyrata HOM05D007196 ORTHO05D009100 2.9e-29 132.1 107 65.4
Psat1g109280 Pisum sativum HOM05D007196 ORTHO05D009100 3.8e-29 131.7 126 57.1
Atru.chr1.612 Acer truncatum HOM05D007196 ORTHO05D009100 5.0e-29 131.3 74 83.8
Hma1.2p1_0488F.1_g163760 Hydrangea macrophylla HOM05D007196 ORTHO05D009100 5.0e-29 131.3 126 61.9
Lalb_Chr19g0131261 Lupinus albus HOM05D007196 ORTHO05D009100 5.0e-29 131.3 81 72.8
TWI23G0806 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 5.0e-29 131.3 124 61.3
EL10Ac3g05770 Beta vulgaris HOM05D007196 ORTHO05D009100 6.5e-29 131.0 124 60.5
CARHR264580 Cardamine hirsuta HOM05D007196 ORTHO05D009100 6.5e-29 131.0 107 65.4
ECA238G2893 Erigeron canadensis HOM05D007196 ORTHO05D009100 6.5e-29 131.0 102 68.6
CANSAT21G1841 Cannabis sativa HOM05D007196 ORTHO05D009100 8.5e-29 130.6 128 58.6
Os07g0467200 Oryza sativa ssp. japonica HOM05D007196 ORTHO05D009100 8.5e-29 130.6 74 86.5
Carub.0008s1174 Capsella rubella HOM05D007196 ORTHO05D009100 1.1e-28 130.2 80 80.0
Cc02_g03760 Coffea canephora HOM05D007196 ORTHO05D009100 1.1e-28 130.2 73 83.6
QL12p039322 Quercus lobata HOM05D007196 ORTHO05D009100 1.1e-28 130.2 151 53.6
Solyc03g007030.3 Solanum lycopersicum HOM05D007196 ORTHO05D009100 1.1e-28 130.2 97 70.1
PSO478G0391 Papaver somniferum HOM05D007196 ORTHO05D009100 1.5e-28 129.8 99 65.7
TPR.G27717 Trifolium pratense HOM05D007196 ORTHO05D009100 1.5e-28 129.8 88 71.6
TAR375G0687 Trochodendron aralioides HOM05D007196 ORTHO05D009100 1.5e-28 129.8 125 64.0
Cpa.g.sc3.256 Carica papaya HOM05D007196 ORTHO05D009100 1.9e-28 129.4 74 82.4
AUR62016084 Chenopodium quinoa HOM05D007196 ORTHO05D009100 1.9e-28 129.4 95 69.5
Lsat_1_v5_gn_2_129760 Lactuca sativa HOM05D007196 ORTHO05D009100 1.9e-28 129.4 73 78.1
Nitab4.5_0003984g0020 Nicotiana tabacum HOM05D007196 ORTHO05D009100 2.5e-28 129.0 74 82.4
PGSC0003DMG400031014 Solanum tuberosum HOM05D007196 ORTHO05D009100 2.5e-28 129.0 74 82.4
Migut.F00414 Erythranthe guttata HOM05D007196 ORTHO05D009100 3.2e-28 128.6 94 64.9
Zm00001eb320190 Zea mays HOM05D007196 ORTHO05D009100 3.2e-28 128.6 94 71.3
arahy.Tifrunner.gnm1.ann1.S0TT2Y Arachis hypogaea HOM05D007196 ORTHO05D009100 7.2e-28 127.5 83 73.5
PGR142G2119 Punica granatum HOM05D007196 ORTHO05D009100 7.2e-28 127.5 111 61.3
A10p09580 Brassica napus HOM05D007196 ORTHO05D009100 9.4e-28 127.1 106 64.2
BraA10t43033Z Brassica rapa HOM05D007196 ORTHO05D009100 9.4e-28 127.1 106 64.2
AUR62021293 Chenopodium quinoa HOM05D007196 ORTHO05D009100 9.4e-28 127.1 90 70.0
Thhalv10015074m.g Eutrema salsugineum HOM05D007196 ORTHO05D009100 9.4e-28 127.1 109 64.2
Sp6g13940 Schrenkiella parvula HOM05D007196 ORTHO05D009100 9.4e-28 127.1 106 61.3
BcaC04g20641 Brassica carinata HOM05D007196 ORTHO05D009100 1.2e-27 126.7 106 64.2
C09p41140 Brassica napus HOM05D007196 ORTHO05D009100 1.2e-27 126.7 106 64.2
BolC9t56992H Brassica oleracea HOM05D007196 ORTHO05D009100 1.2e-27 126.7 106 64.2
Sopen03g003020 Solanum pennellii HOM05D007196 ORTHO05D009100 1.2e-27 126.7 97 68.0
Medtr0050s0180 Medicago truncatula HOM05D007196 ORTHO05D009100 2.1e-27 125.9 128 55.5
Peaxi162Scf00192g00828 Petunia axillaris HOM05D007196 ORTHO05D009100 2.1e-27 125.9 74 81.1
SalBow4G2038 Salvia bowleyana HOM05D007196 ORTHO05D009100 2.1e-27 125.9 93 65.6
BcaB08g35520 Brassica carinata HOM05D007196 ORTHO05D009100 8.0e-27 124.0 106 63.2
ClCG01G005210 Citrullus lanatus HOM05D007196 ORTHO05D009100 1.4e-26 123.2 76 75.0
Cc00_g08970 Coffea canephora HOM05D007196 ORTHO05D009100 1.4e-26 123.2 74 82.4
MBI12_g21133_MAGBIO Magnolia biondii HOM05D007196 ORTHO05D009100 1.4e-26 123.2 123 59.3
HPP92_007351 Vanilla planifolia HOM05D007196 ORTHO05D009100 1.8e-26 122.9 119 56.3
AagrBONN_evm.TU.Sc2ySwM_117.3845 Anthoceros agrestis HOM05D007196 ORTHO05D009100 2.3e-26 122.5 62 88.7
unitig_52.g17755 Utricularia gibba HOM05D007196 ORTHO05D009100 2.3e-26 122.5 89 64.0
Aqoxy7G00560 Aquilegia oxysepala HOM05D007196 ORTHO05D009100 3.0e-26 122.1 70 82.9
Mapoly0132s0038 Marchantia polymorpha HOM05D007196 ORTHO05D009100 3.0e-26 122.1 89 69.7
SEGI_24908 Sequoiadendron giganteum HOM05D007196 ORTHO05D009100 3.0e-26 122.1 70 80.0
CDE11G1107 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 4.0e-26 121.7 81 71.6
SMO367G0606 Selaginella moellendorffii HOM05D003621 ORTHO05D004259 5.2e-26 121.3 89 66.3
DCAR_018131 Daucus carota HOM05D007196 ORTHO05D009100 2.6e-25 119.0 71 78.9
CDE02G2935 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 4.4e-25 118.2 66 77.3
Pp3c23_14000 Physcomitrium patens HOM05D007196 ORTHO05D009100 7.5e-25 117.5 67 77.6
PSO782G2298 Papaver somniferum HOM05D007196 ORTHO05D009100 1.7e-24 116.3 92 63.0
Pp3c24_720 Physcomitrium patens HOM05D007196 ORTHO05D009100 8.2e-24 114.0 96 61.5
Cre01.g050550 Chlamydomonas reinhardtii HOM05D007196 ORTHO05D009100 7.0e-23 110.9 92 59.8
CBR_g49669 Chara braunii HOM05D007196 ORTHO05D009100 3.5e-22 108.6 65 73.8
PGSC0003DMG400019391 Solanum tuberosum HOM05D007196 ORTHO05D009100 1.9e-20 102.8 87 63.2
CAN.G1135.2 Capsicum annuum HOM05D007196 ORTHO05D009100 2.5e-20 102.4 85 63.5
AUR62023670 Chenopodium quinoa HOM05D007196 ORTHO05D001134 5.5e-20 101.3 71 67.6
Haze_26518 Corylus avellana HOM05D007196 ORTHO05D009100 2.2e-13 79.3 63 54.0
FAN03G1444 Fragaria x ananassa HOM05D000077 ORTHO05D000981 8.5e-13 77.4 98 55.1
Dinv28524 Davidia involucrata HOM05D007196 ORTHO05D009100 3.2e-12 75.5 98 56.1
Haze_13814 Corylus avellana HOM05D007196 ORTHO05D009100 3.6e-11 72.0 104 52.9
Cc05_g04470 Coffea canephora HOM05D007196 ORTHO05D009100 7.5e-09 64.3 28 100.0
VMungo0464G1496 Vigna mungo HOM05D007196 ORTHO05D009100 1.7e-08 63.2 50 66.0
Nn4g26452 Nelumbo nucifera HOM05D007196 ORTHO05D009100 1.1e-07 60.5 39 79.5
ATR0757G208 Amborella trichopoda HOM05D007196 ORTHO05D009100 2.0e-06 56.2 45 60.0


User provided reference genes

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