Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD01G1135900 Malus domestica HOM05D006523 ORTHO05D008212 3.5e-71 271.6 140 100.0
MD07G1200600 Malus domestica HOM05D006523 ORTHO05D008212 8.1e-36 154.1 99 85.9
Prupe.2G237400 Prunus persica HOM05D006523 ORTHO05D008212 6.7e-30 134.4 106 71.7
RcHm_v2.0_Chr1g0367871 Rosa chinensis HOM05D006523 ORTHO05D008212 3.3e-29 132.1 99 75.8
FAN01G0853 Fragaria x ananassa HOM05D006523 ORTHO05D008212 9.6e-29 130.6 100 77.0
FAN01G0003 Fragaria x ananassa HOM05D006523 ORTHO05D008212 1.6e-28 129.8 100 77.0
FvH4_7g22770 Fragaria vesca HOM05D006523 ORTHO05D008212 3.6e-28 128.6 100 76.0
FAN06G3404 Fragaria x ananassa HOM05D006523 ORTHO05D008212 3.6e-28 128.6 100 76.0
FAN03G0736 Fragaria x ananassa HOM05D006523 ORTHO05D008212 1.8e-27 126.3 100 74.0
FAN10G0859 Fragaria x ananassa HOM05D006523 ORTHO05D008212 1.7e-25 119.8 100 72.0
TWI15G0822 Tripterygium wilfordii HOM05D006523 ORTHO05D008212 1.3e-22 110.2 106 58.5
Nn8g38773 Nelumbo nucifera HOM05D006523 ORTHO05D008212 2.3e-22 109.4 87 64.4
Dinv03705 Davidia involucrata HOM05D006523 ORTHO05D008212 3.9e-22 108.6 100 62.0
Dinv15863 Davidia involucrata HOM05D006523 ORTHO05D008212 3.9e-22 108.6 100 62.0
TAR633G0385 Trochodendron aralioides HOM05D006523 ORTHO05D008212 3.9e-22 108.6 98 59.2
GSVIVG01016519001 Vitis vinifera HOM05D006523 ORTHO05D008212 5.1e-22 108.2 100 60.0
Eucgr.G02942 Eucalyptus grandis HOM05D006523 ORTHO05D008212 3.3e-21 105.5 100 60.0
Cpa.g.sc1.423 Carica papaya HOM05D006523 ORTHO05D008212 7.4e-21 104.4 87 65.5
DCAR_011715 Daucus carota HOM05D006523 ORTHO05D008212 1.6e-20 103.2 94 62.8
Ah.16g102450 Amaranthus hybridus HOM05D006523 ORTHO05D008212 2.1e-20 102.8 99 58.6
Lj1C939G12 Lonicera japonica HOM05D006523 ORTHO05D008212 2.1e-20 102.8 103 58.3
Potri.010G202200 Populus trichocarpa HOM05D006523 ORTHO05D008212 2.8e-20 102.4 85 67.1
CSS0042327 Camellia sinensis var. sinensis HOM05D006523 ORTHO05D008212 3.7e-20 102.1 100 58.0
Haze_17085 Corylus avellana HOM05D006523 ORTHO05D008212 3.7e-20 102.1 100 59.0
EL10Ac2g04730 Beta vulgaris HOM05D006523 ORTHO05D008212 4.8e-20 101.7 101 57.4
MELO3C021618.2 Cucumis melo HOM05D006523 ORTHO05D008212 4.8e-20 101.7 96 58.3
CiPaw.01G289000 Carya illinoinensis HOM05D006523 ORTHO05D008212 6.2e-20 101.3 116 55.2
Atru.chr12.422 Acer truncatum HOM05D006523 ORTHO05D008212 8.1e-20 100.9 92 60.9
Peaxi162Scf00658g00085 Petunia axillaris HOM05D006523 ORTHO05D008212 8.1e-20 100.9 87 63.2
AUR62012110 Chenopodium quinoa HOM05D006523 ORTHO05D008212 1.1e-19 100.5 89 61.8
ClCG09G019630 Citrullus lanatus HOM05D006523 ORTHO05D008212 1.4e-19 100.1 101 58.4
Sabra10G0156100 Salix brachista HOM05D006523 ORTHO05D008212 1.4e-19 100.1 87 63.2
CsaV3_5G026760 Cucumis sativus L. HOM05D006523 ORTHO05D008212 1.8e-19 99.8 105 56.2
Aqoxy1G00906 Aquilegia oxysepala HOM05D006523 ORTHO05D008212 3.1e-19 99.0 85 60.0
Nitab4.5_0001040g0050 Nicotiana tabacum HOM05D006523 ORTHO05D008212 4.0e-19 98.6 87 59.8
LjContig00141g0009707 Lotus japonicus HOM05D006523 ORTHO05D008212 5.3e-19 98.2 104 54.8
QL08p059471 Quercus lobata HOM05D006523 ORTHO05D008212 6.9e-19 97.8 100 56.0
SalBow6G0031 Salvia bowleyana HOM05D006523 ORTHO05D008212 6.9e-19 97.8 100 55.0
MBI14_g12127_MAGBIO Magnolia biondii HOM05D006523 ORTHO05D008212 9.0e-19 97.4 86 67.4
Manes.10G029100 Manihot esculenta HOM05D006523 ORTHO05D008212 9.0e-19 97.4 100 53.0
Ca_05884_v3 Cicer arietinum L. HOM05D006523 ORTHO05D008212 1.2e-18 97.1 93 58.1
Duzib114G1044 Durio zibethinus HOM05D006523 ORTHO05D008212 1.5e-18 96.7 106 56.6
COL.COLO4_15080 Corchorus olitorius HOM05D006523 ORTHO05D008212 2.6e-18 95.9 106 54.7
Actinidia23669 Actinidia chinensis HOM05D006523 ORTHO05D008212 5.8e-18 94.7 106 50.9
TPR.G3462 Trifolium pratense HOM05D006523 ORTHO05D008212 7.6e-18 94.4 87 58.6
Thecc.10G036400 Theobroma cacao HOM05D006523 ORTHO05D008212 1.0e-17 94.0 93 58.1
Carub.0006s1202 Capsella rubella HOM05D006523 ORTHO05D008212 1.7e-17 93.2 93 59.1
SGA_v2.0_scaffold221G42676 Striga asiatica HOM05D006523 ORTHO05D008212 1.7e-17 93.2 96 57.3
Cc02_g07640 Coffea canephora HOM05D006523 ORTHO05D008212 2.9e-17 92.4 87 55.2
PGR142G0925 Punica granatum HOM05D006523 ORTHO05D008212 2.9e-17 92.4 100 58.0
Gorai.012G071600 Gossypium raimondii HOM05D006523 ORTHO05D008212 3.8e-17 92.0 106 55.7
Medtr5g080020 Medicago truncatula HOM05D006523 ORTHO05D008212 3.8e-17 92.0 100 54.0
arahy.Tifrunner.gnm1.ann1.PJ9UI9 Arachis hypogaea HOM05D006523 ORTHO05D008212 4.9e-17 91.7 104 52.9
AUR62039361 Chenopodium quinoa HOM05D006523 ORTHO05D008212 4.9e-17 91.7 86 59.3
Hund16077 Selenicereus undatus HOM05D006523 ORTHO05D008212 4.9e-17 91.7 99 53.5
CDE07G1400 Ceratophyllum demersum HOM05D006523 ORTHO05D008212 6.5e-17 91.3 85 57.6
Ciclev10033366m.g Citrus clementina HOM05D006523 ORTHO05D008212 6.5e-17 91.3 87 59.8
ECA238G1917 Erigeron canadensis HOM05D006523 ORTHO05D008212 8.4e-17 90.9 106 50.0
Gohir.A05G348500 Gossypium hirsutum HOM05D006523 ORTHO05D008212 8.4e-17 90.9 106 54.7
Zm00001eb062790 Zea mays HOM05D006523 ORTHO05D008212 8.4e-17 90.9 88 53.4
Phvul.008G232100 Phaseolus vulgaris HOM05D006523 ORTHO05D008212 1.1e-16 90.5 100 51.0
Sed0022265 Sechium edule HOM05D006523 ORTHO05D008212 1.1e-16 90.5 102 56.9
arahy.Tifrunner.gnm1.ann1.KN5X6X Arachis hypogaea HOM05D006523 ORTHO05D008212 1.4e-16 90.1 100 52.0
Gohir.D04G064000 Gossypium hirsutum HOM05D006523 ORTHO05D008212 1.4e-16 90.1 106 54.7
Nitab4.5_0001655g0150 Nicotiana tabacum HOM05D006523 ORTHO05D008212 1.4e-16 90.1 87 60.9
VMungo0647G1953 Vigna mungo HOM05D006523 ORTHO05D008212 1.4e-16 90.1 100 52.0
unitig_61.g26158 Utricularia gibba HOM05D006523 ORTHO05D008212 1.9e-16 89.7 88 55.7
unitig_70.g32538 Utricularia gibba HOM05D006523 ORTHO05D008212 1.9e-16 89.7 88 55.7
Thhalv10014583m.g Eutrema salsugineum HOM05D006523 ORTHO05D008212 2.5e-16 89.4 101 55.4
FAN06G1109 Fragaria x ananassa HOM05D006523 ORTHO05D008212 2.5e-16 89.4 99 56.6
Migut.F01454 Erythranthe guttata HOM05D006523 ORTHO05D008212 3.2e-16 89.0 100 53.0
MSTRG.278 Avicennia marina HOM05D006523 ORTHO05D008212 4.2e-16 88.6 101 55.4
Aa31sc24G140 Aethionema arabicum HOM05D006523 ORTHO05D008212 5.5e-16 88.2 93 55.9
HanXRQChr07g0201431 Helianthus annuus HOM05D006523 ORTHO05D008212 5.5e-16 88.2 101 53.5
THA.LOC104826739 Tarenaya hassleriana HOM05D006523 ORTHO05D008212 5.5e-16 88.2 90 54.4
CANSAT56G0033 Cannabis sativa HOM05D006523 ORTHO05D008212 7.1e-16 87.8 99 52.5
CANSAT56G2206 Cannabis sativa HOM05D006523 ORTHO05D008212 7.1e-16 87.8 99 52.5
Lsat_1_v5_gn_2_118400 Lactuca sativa HOM05D006523 ORTHO05D008212 7.1e-16 87.8 100 52.0
PSO339G5561 Papaver somniferum HOM05D006523 ORTHO05D008212 7.1e-16 87.8 106 52.8
arahy.Tifrunner.gnm1.ann1.E9XZMQ Arachis hypogaea HOM05D006523 ORTHO05D015430 2.1e-15 86.3 92 54.3
AL6G24460 Arabidopsis lyrata HOM05D006523 ORTHO05D008212 2.7e-15 85.9 93 55.9
Lalb_Chr10g0104601 Lupinus albus HOM05D006523 ORTHO05D008212 3.5e-15 85.5 85 57.6
Os03g0822300 Oryza sativa ssp. japonica HOM05D006523 ORTHO05D008212 3.5e-15 85.5 88 50.0
Sp6g30170 Schrenkiella parvula HOM05D006523 ORTHO05D008212 3.5e-15 85.5 96 55.2
BcaC04g19074 Brassica carinata HOM05D006523 ORTHO05D008212 4.6e-15 85.1 96 57.3
A10p24510 Brassica napus HOM05D006523 ORTHO05D008212 4.6e-15 85.1 97 56.7
BolC9t59161H Brassica oleracea HOM05D006523 ORTHO05D008212 4.6e-15 85.1 96 57.3
BraA10t44516Z Brassica rapa HOM05D006523 ORTHO05D008212 4.6e-15 85.1 97 56.7
PSO513G0162 Papaver somniferum HOM05D006523 ORTHO05D008212 4.6e-15 85.1 106 51.9
C09p63250 Brassica napus HOM05D006523 ORTHO05D008212 6.0e-15 84.7 97 56.7
CARHR199600 Cardamine hirsuta HOM05D006523 ORTHO05D008212 6.0e-15 84.7 93 55.9
AT5G13830 Arabidopsis thaliana HOM05D006523 ORTHO05D008212 7.9e-15 84.3 93 57.0
arahy.Tifrunner.gnm1.ann1.67Z0GV Arachis hypogaea HOM05D006523 ORTHO05D008212 7.9e-15 84.3 120 46.7
Glyma.14G067900 Glycine max HOM05D006523 ORTHO05D008212 7.9e-15 84.3 100 53.0
arahy.Tifrunner.gnm1.ann1.5RG0UU Arachis hypogaea HOM05D006523 ORTHO05D008212 1.0e-14 84.0 93 53.8
BcaC04g24249 Brassica carinata HOM05D006523 ORTHO05D008212 3.0e-14 82.4 93 57.0
arahy.Tifrunner.gnm1.ann1.96VUID Arachis hypogaea HOM05D006523 ORTHO05D008212 3.9e-14 82.0 105 49.5
ATR0559G152 Amborella trichopoda HOM05D006523 ORTHO05D008212 6.7e-14 81.3 88 51.1
QL02p008420 Quercus lobata HOM05D006523 ORTHO05D008212 6.7e-14 81.3 76 57.9
arahy.Tifrunner.gnm1.ann1.TGUH8U Arachis hypogaea HOM05D006523 ORTHO05D008212 3.3e-13 79.0 105 48.6
arahy.Tifrunner.gnm1.ann1.5T6QS1 Arachis hypogaea HOM05D006523 ORTHO05D008212 2.8e-12 75.9 95 47.4
Nn2g11152 Nelumbo nucifera HOM05D006523 ORTHO05D008212 2.8e-12 75.9 67 56.7
Oeu016465.1 Olea europaea HOM05D006523 ORTHO05D008212 3.1e-11 72.4 90 52.2
AagrBONN_evm.TU.Sc2ySwM_228.3773 Anthoceros agrestis HOM05D006523 ORTHO05D008212 4.1e-11 72.0 97 47.4
SEGI_07978 Sequoiadendron giganteum HOM05D006523 ORTHO05D008212 1.2e-10 70.5 89 48.3
Pp3c22_17560 Physcomitrium patens HOM05D006523 ORTHO05D008212 3.4e-10 68.9 105 41.0
Mapoly0038s0066 Marchantia polymorpha HOM05D006523 ORTHO05D008212 1.3e-09 67.0 82 52.4
vmacro07184 Vaccinium macrocarpon HOM05D006523 ORTHO05D008212 1.6e-07 60.1 50 60.0
SMO145G0100 Selaginella moellendorffii HOM05D006523 ORTHO05D008212 7.9e-07 57.8 84 44.0


User provided reference genes

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