Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD01G1062200 Malus domestica HOM05D006442 ORTHO05D007980 2.6e-49 198.4 98 100.0
MD07G1004900 Malus domestica HOM05D006442 ORTHO05D007980 3.5e-25 118.2 72 79.2
CSS0031684 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 3.2e-23 111.7 72 75.0
CSS0016496 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 4.2e-23 111.3 72 75.0
Ciclev10033058m.g Citrus clementina HOM05D006442 ORTHO05D007980 5.5e-23 110.9 72 75.0
Lj3g0007274 Lotus japonicus HOM05D006442 ORTHO05D007980 5.5e-23 110.9 72 73.6
Prupe.2G007200 Prunus persica HOM05D006442 ORTHO05D007980 5.5e-23 110.9 72 76.4
Aqoxy1G00188 Aquilegia oxysepala HOM05D006442 ORTHO05D007980 9.4e-23 110.2 72 73.6
FvH4_7g00510 Fragaria vesca HOM05D006442 ORTHO05D007980 9.4e-23 110.2 72 75.0
FAN03G1462 Fragaria x ananassa HOM05D006442 ORTHO05D007980 9.4e-23 110.2 72 75.0
FAN06G2479 Fragaria x ananassa HOM05D006442 ORTHO05D007980 9.4e-23 110.2 72 75.0
FAN10G1890 Fragaria x ananassa HOM05D006442 ORTHO05D007980 9.4e-23 110.2 72 75.0
Dinv43911 Davidia involucrata HOM05D006442 ORTHO05D007980 1.2e-22 109.8 72 75.0
MSTRG.28085 Avicennia marina HOM05D006442 ORTHO05D007980 1.6e-22 109.4 72 73.6
Glyma.15G271700 Glycine max HOM05D006442 ORTHO05D007980 2.1e-22 109.0 72 70.8
Potri.001G225500 Populus trichocarpa HOM05D006442 ORTHO05D007980 2.1e-22 109.0 72 73.6
Sabra16G0134100 Salix brachista HOM05D006442 ORTHO05D007980 2.1e-22 109.0 72 73.6
HanXRQChr01g0018511 Helianthus annuus HOM05D006442 ORTHO05D007980 4.7e-22 107.8 72 73.6
Lsat_1_v5_gn_8_7620 Lactuca sativa HOM05D006442 ORTHO05D007980 6.1e-22 107.5 72 73.6
Solyc10g037980.2 Solanum lycopersicum HOM05D006442 ORTHO05D007980 6.1e-22 107.5 72 73.6
Actinidia21568 Actinidia chinensis HOM05D006442 ORTHO05D007980 8.0e-22 107.1 72 70.8
Peaxi162Scf00045g00327 Petunia axillaris HOM05D006442 ORTHO05D007980 8.0e-22 107.1 72 69.4
Cfa010728 Carpinus fangiana HOM05D006442 ORTHO05D007980 1.0e-21 106.7 72 72.2
Haze_03245 Corylus avellana HOM05D006442 ORTHO05D007980 1.0e-21 106.7 72 72.2
Migut.N01489 Erythranthe guttata HOM05D006442 ORTHO05D007980 1.0e-21 106.7 72 70.8
Rhsim07G0053100 Rhododendron simsii HOM05D006442 ORTHO05D007980 1.0e-21 106.7 72 72.2
PGSC0003DMG400026375 Solanum tuberosum HOM05D006442 ORTHO05D007980 1.0e-21 106.7 72 70.8
Atru.chr11.2670 Acer truncatum HOM05D006442 ORTHO05D007980 1.4e-21 106.3 72 70.8
TPR.G12183 Trifolium pratense HOM05D006442 ORTHO05D007980 1.8e-21 105.9 72 70.8
TWI09G1159 Tripterygium wilfordii HOM05D006442 ORTHO05D007980 1.8e-21 105.9 72 72.2
CAN.G1110.8 Capsicum annuum HOM05D006442 ORTHO05D007980 2.3e-21 105.5 72 70.8
Actinidia20688 Actinidia chinensis HOM05D006442 ORTHO05D007980 4.0e-21 104.8 72 70.8
DCAR_006304 Daucus carota HOM05D006442 ORTHO05D007980 4.0e-21 104.8 72 72.2
Duzib133G0004 Durio zibethinus HOM05D006442 ORTHO05D007980 4.0e-21 104.8 72 65.3
Manes.10G148300 Manihot esculenta HOM05D006442 ORTHO05D007980 4.0e-21 104.8 72 72.2
Sed0019847 Sechium edule HOM05D006442 ORTHO05D007980 4.0e-21 104.8 72 68.1
VMungo1080G0430 Vigna mungo HOM05D006442 ORTHO05D007980 5.2e-21 104.4 72 69.4
CAN.G1076.12 Capsicum annuum HOM05D006442 ORTHO05D007980 6.7e-21 104.0 72 69.4
CiPaw.12G060500 Carya illinoinensis HOM05D006442 ORTHO05D007980 6.7e-21 104.0 72 70.8
Cc02_g27340 Coffea canephora HOM05D006442 ORTHO05D007980 6.7e-21 104.0 72 69.4
Sopen10g011600 Solanum pennellii HOM05D006442 ORTHO05D007980 6.7e-21 104.0 72 72.2
ECA248G1263 Erigeron canadensis HOM05D006442 ORTHO05D007980 8.8e-21 103.6 72 70.8
Hma1.2p1_0010F.1_g007050 Hydrangea macrophylla HOM05D006442 ORTHO05D007980 8.8e-21 103.6 72 70.8
TAR633G2790 Trochodendron aralioides HOM05D006442 ORTHO05D007980 8.8e-21 103.6 72 69.4
Eucgr.G03402 Eucalyptus grandis HOM05D006442 ORTHO05D007980 1.1e-20 103.2 72 68.1
RcHm_v2.0_Chr1g0314301 Rosa chinensis HOM05D006442 ORTHO05D007980 1.1e-20 103.2 72 69.4
arahy.Tifrunner.gnm1.ann1.9R1925 Arachis hypogaea HOM05D006442 ORTHO05D007980 1.5e-20 102.8 72 65.3
arahy.Tifrunner.gnm1.ann1.A55RA3 Arachis hypogaea HOM05D006442 ORTHO05D007980 1.5e-20 102.8 72 65.3
Ah.16g101020 Amaranthus hybridus HOM05D006442 ORTHO05D007980 2.6e-20 102.1 72 70.8
Cc02_g27370 Coffea canephora HOM05D006442 ORTHO05D007980 2.6e-20 102.1 72 69.4
Nitab4.5_0002012g0020 Nicotiana tabacum HOM05D006442 ORTHO05D007980 2.6e-20 102.1 72 68.1
SalBow5G2051 Salvia bowleyana HOM05D006442 ORTHO05D007980 2.6e-20 102.1 72 68.1
GSVIVG01032037001 Vitis vinifera HOM05D006442 ORTHO05D007980 2.6e-20 102.1 72 68.1
Gohir.D09G099100 Gossypium hirsutum HOM05D006442 ORTHO05D007980 3.3e-20 101.7 72 66.7
Gorai.006G116100 Gossypium raimondii HOM05D006442 ORTHO05D007980 3.3e-20 101.7 72 66.7
Phvul.005G038700 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 3.3e-20 101.7 72 68.1
VMungo1080G0583 Vigna mungo HOM05D006442 ORTHO05D007980 4.4e-20 101.3 72 66.7
Phvul.005G037200 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 7.4e-20 100.5 72 65.3
Oeu064276.1 Olea europaea HOM05D006442 ORTHO05D007980 9.7e-20 100.1 72 65.3
SGA_v2.0_scaffold10G05439 Striga asiatica HOM05D006442 ORTHO05D007980 9.7e-20 100.1 72 66.7
Glyma.08G151500 Glycine max HOM05D006442 ORTHO05D007980 1.3e-19 99.8 72 66.7
AUR62023154 Chenopodium quinoa HOM05D006442 ORTHO05D007980 1.7e-19 99.4 72 68.1
Psat5g207000 Pisum sativum HOM05D006442 ORTHO05D007980 1.7e-19 99.4 72 63.9
AUR62009476 Chenopodium quinoa HOM05D006442 ORTHO05D007980 2.2e-19 99.0 72 68.1
Gohir.A09G099700 Gossypium hirsutum HOM05D006442 ORTHO05D007980 2.2e-19 99.0 72 63.9
Oeu013593.2 Olea europaea HOM05D006442 ORTHO05D007980 2.2e-19 99.0 72 66.7
SGA_v2.0_scaffold4G02243 Striga asiatica HOM05D006442 ORTHO05D007980 2.2e-19 99.0 72 65.3
COL.COLO4_23906 Corchorus olitorius HOM05D006442 ORTHO05D007980 3.7e-19 98.2 74 66.2
PGR042G3140 Punica granatum HOM05D006442 ORTHO05D007980 3.7e-19 98.2 72 65.3
Lalb_Chr25g0283271 Lupinus albus HOM05D006442 ORTHO05D007980 8.2e-19 97.1 71 62.0
EL10Ac2g04436 Beta vulgaris HOM05D006442 ORTHO05D007980 1.4e-18 96.3 72 66.7
CANSAT01G1452 Cannabis sativa HOM05D006442 ORTHO05D007980 2.4e-18 95.5 72 66.7
Medtr3g027090 Medicago truncatula HOM05D006442 ORTHO05D007980 2.4e-18 95.5 72 62.5
Nn2g15582 Nelumbo nucifera HOM05D006442 ORTHO05D007980 7.0e-18 94.0 72 63.9
Nn7g36056 Nelumbo nucifera HOM05D006442 ORTHO05D007980 1.2e-17 93.2 72 62.5
AUR62009477 Chenopodium quinoa HOM05D006442 ORTHO05D007980 2.6e-17 92.0 72 62.5
Sc14g0005190 Simmondsia chinensis HOM05D006442 ORTHO05D007980 2.6e-17 92.0 72 62.5
Thecc.01G414800 Theobroma cacao HOM05D006442 ORTHO05D007980 5.9e-17 90.9 70 65.7
AUR62023155 Chenopodium quinoa HOM05D006442 ORTHO05D007980 1.0e-16 90.1 72 62.5
PSO339G0425 Papaver somniferum HOM05D006442 ORTHO05D007980 5.0e-16 87.8 72 63.9
CDE07G0477 Ceratophyllum demersum HOM05D006442 ORTHO05D007980 1.5e-15 86.3 72 55.6
THA.LOC104823024 Tarenaya hassleriana HOM05D006442 ORTHO05D007980 1.5e-15 86.3 72 58.3
PSO384G2221 Papaver somniferum HOM05D006442 ORTHO05D007980 2.5e-15 85.5 72 62.5
AL8G18110 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 5.5e-15 84.3 73 58.9
CAN.G37.7 Capsicum annuum HOM05D006442 ORTHO05D007980 5.5e-15 84.3 72 54.2
QL04p004786 Quercus lobata HOM05D006442 ORTHO05D007980 9.4e-15 83.6 115 44.3
unitig_22.g5766 Utricularia gibba HOM05D006442 ORTHO05D007980 1.2e-14 83.2 70 55.7
MD00G1052400 Malus domestica HOM05D006442 ORTHO05D007980 1.6e-14 82.8 41 85.4
BcaC06g31744 Brassica carinata HOM05D006442 ORTHO05D007980 2.7e-14 82.0 73 58.9
AT5G42850 Arabidopsis thaliana HOM05D006442 ORTHO05D007980 6.1e-14 80.9 73 57.5
Thhalv10003289m.g Eutrema salsugineum HOM05D006442 ORTHO05D007980 6.1e-14 80.9 73 57.5
Sp2g07550 Schrenkiella parvula HOM05D006442 ORTHO05D007980 4.0e-13 78.2 73 56.2
BcaC02g10802 Brassica carinata HOM05D006442 ORTHO05D007980 6.8e-13 77.4 73 54.8
C04p24990 Brassica napus HOM05D006442 ORTHO05D007980 6.8e-13 77.4 73 54.8
BolC4t23999H Brassica oleracea HOM05D006442 ORTHO05D007980 6.8e-13 77.4 73 54.8
A06p48230 Brassica napus HOM05D006442 ORTHO05D007980 8.8e-13 77.0 73 54.8
BraA06t27691Z Brassica rapa HOM05D006442 ORTHO05D007980 8.8e-13 77.0 73 54.8
Carub.0008s0607 Capsella rubella HOM05D006442 ORTHO05D007980 8.8e-13 77.0 73 54.8
Ca_27853_v3 Cicer arietinum L. HOM05D006442 ORTHO05D007980 1.3e-11 73.2 48 70.8
ATR0605G011 Amborella trichopoda HOM05D006442 ORTHO05D007980 1.7e-11 72.8 72 51.4
CsaV3_3G032380 Cucumis sativus L. HOM05D002156 ORTHO05D002328 2.2e-11 72.4 48 70.8
MELO3C023952.2 Cucumis melo HOM05D002156 ORTHO05D002328 4.8e-11 71.2 48 68.8
CARHR181310 Cardamine hirsuta HOM05D006442 ORTHO05D007980 6.3e-11 70.9 73 52.1
Atru.chr11.2672 Acer truncatum HOM05D006442 ORTHO05D007980 1.1e-10 70.1 50 70.0
Aa31LG8G5740 Aethionema arabicum HOM05D000097 ORTHO05D000041 1.8e-10 69.3 74 50.0
ClCG10G012580 Citrullus lanatus HOM05D002156 ORTHO05D002328 4.1e-10 68.2 48 66.7
Glyma.08G152300 Glycine max HOM05D006442 ORTHO05D007980 5.4e-10 67.8 70 50.0
AagrBONN_evm.TU.Sc2ySwM_117.1593 Anthoceros agrestis HOM05D006442 ORTHO05D007980 1.6e-09 66.2 72 50.0
AL8G12830 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 3.5e-09 65.1 46 65.2
AL5G40550 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 1.7e-08 62.8 47 63.8
HPP92_018950 Vanilla planifolia HOM05D006442 ORTHO05D007980 3.8e-08 61.6 73 46.6
SEGI_10267 Sequoiadendron giganteum HOM05D006442 ORTHO05D007980 6.5e-08 60.8 66 47.0
Zm00001eb381670 Zea mays HOM05D006442 ORTHO05D007980 8.5e-08 60.5 76 46.1
Os06g0320000 Oryza sativa ssp. japonica HOM05D006442 ORTHO05D007980 1.5e-07 59.7 88 38.6
Mapoly0028s0130 Marchantia polymorpha HOM05D006442 ORTHO05D007980 8.0e-06 53.9 72 40.3


User provided reference genes

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