Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD01G1028400 Malus domestica HOM05D002385 ORTHO05D002245 1.9e-22 108.2 53 100.0
RcHm_v2.0_Chr2g0153701 Rosa chinensis HOM05D002385 ORTHO05D002245 1.2e-11 72.4 50 74.0
RcHm_v2.0_Chr2g0153741 Rosa chinensis HOM05D002385 ORTHO05D002245 3.4e-11 70.9 50 72.0
Prupe.6G185000 Prunus persica HOM05D002385 ORTHO05D002245 1.3e-10 68.9 47 76.6
FAN14G0168 Fragaria x ananassa HOM05D002385 ORTHO05D002245 4.9e-10 67.0 51 64.7
Prupe.6G185200 Prunus persica HOM05D002385 ORTHO05D002245 4.9e-10 67.0 50 72.0
Prupe.6G185400 Prunus persica HOM05D002385 ORTHO05D002245 1.1e-09 65.9 50 72.0
RcHm_v2.0_Chr2g0153711 Rosa chinensis HOM05D002385 ORTHO05D002245 1.1e-09 65.9 50 72.0
Prupe.6G185600 Prunus persica HOM05D002385 ORTHO05D002245 1.9e-09 65.1 50 72.0
Prupe.6G185500 Prunus persica HOM05D002385 ORTHO05D002245 2.4e-09 64.7 50 70.0
CANSAT64G2629 Cannabis sativa HOM05D002385 ORTHO05D002245 4.2e-09 63.9 50 60.0
RcHm_v2.0_Chr2g0153751 Rosa chinensis HOM05D002385 ORTHO05D002245 5.5e-09 63.5 50 70.0
CiPaw.03G113600 Carya illinoinensis HOM05D002385 ORTHO05D002245 7.1e-09 63.2 50 68.0
RcHm_v2.0_Chr2g0153691 Rosa chinensis HOM05D002385 ORTHO05D002245 7.1e-09 63.2 50 66.0
PGR031G2469 Punica granatum HOM05D002385 ORTHO05D002245 9.3e-09 62.8 50 70.0
RcHm_v2.0_Chr2g0114501 Rosa chinensis HOM05D002385 ORTHO05D002245 1.2e-08 62.4 50 68.0
C05p41120 Brassica napus HOM05D002385 ORTHO05D002245 2.1e-08 61.6 50 62.0
BolC5t32855H Brassica oleracea HOM05D002385 ORTHO05D002245 2.1e-08 61.6 50 62.0
FvH4_6g39683 Fragaria vesca HOM05D002385 ORTHO05D002245 2.1e-08 61.6 39 74.4
TWI60G1403 Tripterygium wilfordii HOM05D002385 ORTHO05D002245 2.1e-08 61.6 50 66.0
FAN26G3044 Fragaria x ananassa HOM05D002385 ORTHO05D002245 3.5e-08 60.8 50 66.0
BcaB06g28585 Brassica carinata HOM05D002385 ORTHO05D002245 6.0e-08 60.1 50 60.0
BcaC02g07945 Brassica carinata HOM05D002385 ORTHO05D002245 6.0e-08 60.1 50 60.0
C04p61680 Brassica napus HOM05D002385 ORTHO05D002245 6.0e-08 60.1 50 60.0
BraA04t17993Z Brassica rapa HOM05D002385 ORTHO05D002245 6.0e-08 60.1 50 60.0
MD17G1127900 Malus domestica HOM05D002385 ORTHO05D002245 6.0e-08 60.1 50 68.0
Prupe.3G187200 Prunus persica HOM05D002385 ORTHO05D002245 6.0e-08 60.1 50 68.0
THA.LOC104822278 Tarenaya hassleriana HOM05D002385 ORTHO05D002245 6.0e-08 60.1 50 62.0
THA.LOC104826161 Tarenaya hassleriana HOM05D002385 ORTHO05D002245 6.0e-08 60.1 50 66.0
RcHm_v2.0_Chr2g0114521 Rosa chinensis HOM05D002385 ORTHO05D002245 7.9e-08 59.7 50 66.0
Thhalv10021881m.g Eutrema salsugineum HOM05D002385 ORTHO05D002245 1.0e-07 59.3 50 68.0
FAN02G1107 Fragaria x ananassa HOM05D002385 ORTHO05D002245 1.3e-07 58.9 39 69.2
MD09G1137600 Malus domestica HOM05D002385 ORTHO05D002245 1.3e-07 58.9 50 66.0
AL3G36500 Arabidopsis lyrata HOM05D002385 ORTHO05D002245 1.8e-07 58.5 50 68.0
AT3G22240 Arabidopsis thaliana HOM05D002385 ORTHO05D002245 1.8e-07 58.5 50 68.0
Sp3g20030 Schrenkiella parvula HOM05D002385 ORTHO05D002245 1.8e-07 58.5 50 68.0
BcaC09g49159 Brassica carinata HOM05D002385 ORTHO05D002245 2.3e-07 58.2 50 68.0
C01p42010 Brassica napus HOM05D002385 ORTHO05D002245 2.3e-07 58.2 50 68.0
Prupe.3G187300 Prunus persica HOM05D002385 ORTHO05D002245 2.3e-07 58.2 50 68.0
Carub.0003s2241 Capsella rubella HOM05D002385 ORTHO05D002245 3.0e-07 57.8 50 66.0
FvH4_6g39680 Fragaria vesca HOM05D002385 ORTHO05D002245 3.0e-07 57.8 51 68.6
FAN05G0132 Fragaria x ananassa HOM05D002385 ORTHO05D002245 3.0e-07 57.8 38 68.4
FAN05G4252 Fragaria x ananassa HOM05D002385 ORTHO05D002245 3.0e-07 57.8 51 68.6
FAN14G2541 Fragaria x ananassa HOM05D002385 ORTHO05D002245 3.0e-07 57.8 51 68.6
Cfa023569 Carpinus fangiana HOM05D002385 ORTHO05D002245 3.9e-07 57.4 54 63.0
Cfa023571 Carpinus fangiana HOM05D002385 ORTHO05D002245 3.9e-07 57.4 50 62.0
Haze_13596 Corylus avellana HOM05D002385 ORTHO05D002245 3.9e-07 57.4 50 62.0
Oeu003091.1 Olea europaea HOM05D002385 ORTHO05D002245 3.9e-07 57.4 53 58.5
Aqoxy1G01477 Aquilegia oxysepala HOM05D002385 ORTHO05D002245 5.1e-07 57.0 50 62.0
Haze_13600 Corylus avellana HOM05D002385 ORTHO05D002245 5.1e-07 57.0 50 62.0
Duzib138G1429 Durio zibethinus HOM05D002385 ORTHO05D002245 5.1e-07 57.0 50 62.0
FAN23G3060 Fragaria x ananassa HOM05D002385 ORTHO05D002245 5.1e-07 57.0 50 64.0
Potri.006G021600 Populus trichocarpa HOM05D002385 ORTHO05D002245 5.1e-07 57.0 52 67.3
DCAR_016934 Daucus carota HOM05D002385 ORTHO05D002245 6.7e-07 56.6 50 60.0
Duzib133G0918 Durio zibethinus HOM05D002385 ORTHO05D002245 6.7e-07 56.6 51 64.7
Phvul.006G001200 Phaseolus vulgaris HOM05D002385 ORTHO05D002245 6.7e-07 56.6 48 66.7
FAN02G0915 Fragaria x ananassa HOM05D002385 ORTHO05D002245 8.7e-07 56.2 51 66.7
MELO3C026402.2 Cucumis melo HOM05D002385 ORTHO05D002245 1.1e-06 55.8 50 62.0
Oeu048060.1 Olea europaea HOM05D002385 ORTHO05D002245 1.1e-06 55.8 53 56.6
QL04p061416 Quercus lobata HOM05D002385 ORTHO05D002245 1.1e-06 55.8 49 61.2
BcaB02g10483 Brassica carinata HOM05D002385 ORTHO05D002245 1.5e-06 55.5 50 58.0
A05p12990 Brassica napus HOM05D002385 ORTHO05D002245 1.5e-06 55.5 50 58.0
BraA05t20239Z Brassica rapa HOM05D002385 ORTHO05D002245 1.5e-06 55.5 50 58.0
CsaV3_4G032300 Cucumis sativus L. HOM05D002385 ORTHO05D002245 1.5e-06 55.5 50 66.0
FvH4_1g21001 Fragaria vesca HOM05D002385 ORTHO05D002245 1.5e-06 55.5 50 62.0
Gohir.D07G190900 Gossypium hirsutum HOM05D002385 ORTHO05D002245 1.5e-06 55.5 50 66.0
Gorai.001G213300 Gossypium raimondii HOM05D002385 ORTHO05D002245 1.5e-06 55.5 50 66.0
Manes.09G073500 Manihot esculenta HOM05D002385 ORTHO05D002245 1.5e-06 55.5 54 61.1
Nn7g38131 Nelumbo nucifera HOM05D002385 ORTHO05D002245 1.5e-06 55.5 50 60.0
THA.LOC109116124 Tarenaya hassleriana HOM05D002385 ORTHO05D002245 1.5e-06 55.5 50 58.0
CARHR098150 Cardamine hirsuta HOM05D002385 ORTHO05D002245 1.9e-06 55.1 50 64.0
Cfa023568 Carpinus fangiana HOM05D002385 ORTHO05D002245 1.9e-06 55.1 50 60.0
FvH4_6g39640 Fragaria vesca HOM05D002385 ORTHO05D002245 1.9e-06 55.1 38 65.8
FvH4_6g39660 Fragaria vesca HOM05D002385 ORTHO05D002245 1.9e-06 55.1 51 66.7
FAN14G3978 Fragaria x ananassa HOM05D002385 ORTHO05D002245 1.9e-06 55.1 38 65.8
Oeu048064.1 Olea europaea HOM05D002385 ORTHO05D002245 1.9e-06 55.1 53 56.6
Potri.016G019201 Populus trichocarpa HOM05D002385 ORTHO05D002245 1.9e-06 55.1 50 68.0
Aa31LG5G4320 Aethionema arabicum HOM05D002385 ORTHO05D002245 2.5e-06 54.7 51 52.9
Haze_13597 Corylus avellana HOM05D002385 ORTHO05D002245 2.5e-06 54.7 50 60.0
Duzib133G1087 Durio zibethinus HOM05D002385 ORTHO05D002245 2.5e-06 54.7 49 65.3
Glyma.08G170900 Glycine max HOM05D002385 ORTHO05D002245 2.5e-06 54.7 52 59.6
Glyma.08G171400 Glycine max HOM05D002385 ORTHO05D002245 2.5e-06 54.7 52 51.9
Gohir.A07G184100 Gossypium hirsutum HOM05D002385 ORTHO05D002245 2.5e-06 54.7 50 66.0
TPR.G9734 Trifolium pratense HOM05D002385 ORTHO05D002245 2.5e-06 54.7 50 56.0
unitig_699.g19631 Utricularia gibba HOM05D002385 ORTHO05D002245 2.5e-06 54.7 51 58.8
Actinidia30458 Actinidia chinensis HOM05D002385 ORTHO05D002245 3.3e-06 54.3 50 62.0
Actinidia39326 Actinidia chinensis HOM05D002385 ORTHO05D002245 3.3e-06 54.3 50 60.0
Ca_22650_v3 Cicer arietinum L. HOM05D002385 ORTHO05D002245 3.3e-06 54.3 48 64.6
Eucgr.A00897 Eucalyptus grandis HOM05D002385 ORTHO05D002245 3.3e-06 54.3 50 62.0
FAN14G3003 Fragaria x ananassa HOM05D002385 ORTHO05D002245 3.3e-06 54.3 51 66.7
Medtr4g091090 Medicago truncatula HOM05D002385 ORTHO05D002245 3.3e-06 54.3 50 58.0
Oeu027273.1 Olea europaea HOM05D002385 ORTHO05D002245 3.3e-06 54.3 55 58.2
Sp4g14570 Schrenkiella parvula HOM05D002385 ORTHO05D002245 3.3e-06 54.3 50 58.0
Sp4g14580 Schrenkiella parvula HOM05D002385 ORTHO05D002245 3.3e-06 54.3 50 58.0
CARHR125980 Cardamine hirsuta HOM05D002385 ORTHO05D002245 4.3e-06 53.9 50 56.0
Haze_13593 Corylus avellana HOM05D002385 ORTHO05D002245 4.3e-06 53.9 55 60.0
Oeu012375.1 Olea europaea HOM05D002385 ORTHO05D002245 4.3e-06 53.9 50 56.0
AT2G32210 Arabidopsis thaliana HOM05D002385 ORTHO05D002245 5.6e-06 53.5 50 56.0
BcaC02g11342 Brassica carinata HOM05D002385 ORTHO05D002245 5.6e-06 53.5 50 56.0
C04p17420 Brassica napus HOM05D002385 ORTHO05D002245 5.6e-06 53.5 50 56.0
CAN.G1202.1 Capsicum annuum HOM05D002385 ORTHO05D002245 5.6e-06 53.5 50 68.0
Cfa023028 Carpinus fangiana HOM05D002385 ORTHO05D002245 5.6e-06 53.5 50 60.0
A01p32930 Brassica napus HOM05D002385 ORTHO05D002245 7.4e-06 53.1 50 64.0
BraA01t03414Z Brassica rapa HOM05D002385 ORTHO05D002245 7.4e-06 53.1 50 64.0
QL04p061381 Quercus lobata HOM05D002385 ORTHO05D002245 7.4e-06 53.1 49 59.2
Ca_03673_v3 Cicer arietinum L. HOM05D002385 ORTHO05D002245 9.6e-06 52.8 50 54.0
Dinv19617 Davidia involucrata HOM05D002385 ORTHO05D002245 9.6e-06 52.8 53 52.8
Medtr2g069420 Medicago truncatula HOM05D002385 ORTHO05D002245 9.6e-06 52.8 50 56.0
Medtr2g069430 Medicago truncatula HOM05D002385 ORTHO05D002245 9.6e-06 52.8 50 56.0
Peaxi162Scf00322g00010 Petunia axillaris HOM05D002385 ORTHO05D002245 9.6e-06 52.8 50 66.0
QL04p061407 Quercus lobata HOM05D002385 ORTHO05D002245 9.6e-06 52.8 49 57.1
Sabra06G0015400 Salix brachista HOM05D002385 ORTHO05D002245 9.6e-06 52.8 47 63.8
PGSC0003DMG400019578 Solanum tuberosum HOM05D002385 ORTHO05D002245 9.6e-06 52.8 50 66.0
Thecc.01G172200 Theobroma cacao HOM05D002385 ORTHO05D002245 9.6e-06 52.8 51 62.7
TAR626G0681 Trochodendron aralioides HOM05D002385 ORTHO05D002245 9.6e-06 52.8 49 59.2
GSVIVG01015781001 Vitis vinifera HOM05D002385 ORTHO05D002245 9.6e-06 52.8 50 60.0
GSVIVG01015789001 Vitis vinifera HOM05D002385 ORTHO05D002245 9.6e-06 52.8 50 60.0


User provided reference genes

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