Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD01G1005400 Malus domestica HOM05D007927 ORTHO05D010029 2.1e-121 439.1 230 100.0
Prupe.4G271700 Prunus persica HOM05D007927 ORTHO05D010029 1.1e-95 353.6 239 81.6
FAN28G0845 Fragaria x ananassa HOM05D007927 ORTHO05D010029 7.4e-87 324.3 243 75.7
FvH4_1g24440 Fragaria vesca HOM05D007927 ORTHO05D010029 6.3e-86 321.2 247 74.1
FAN19G2953 Fragaria x ananassa HOM05D007927 ORTHO05D010029 8.2e-86 320.9 248 73.8
FAN23G1573 Fragaria x ananassa HOM05D007927 ORTHO05D010029 1.1e-82 310.5 228 76.8
RcHm_v2.0_Chr2g0121541 Rosa chinensis HOM05D007927 ORTHO05D010029 3.2e-82 308.9 238 72.7
FAN26G1905 Fragaria x ananassa HOM05D007927 ORTHO05D010029 9.4e-82 307.4 291 64.3
CiPaw.04G081700 Carya illinoinensis HOM05D007927 ORTHO05D010029 9.4e-74 280.8 242 65.3
CsaV3_2G019410 Cucumis sativus L. HOM05D007927 ORTHO05D010029 4.7e-73 278.5 238 66.8
ClCG02G000450 Citrullus lanatus HOM05D007927 ORTHO05D010029 1.0e-72 277.3 235 66.4
QL10p043457 Quercus lobata HOM05D007927 ORTHO05D010029 1.0e-72 277.3 247 66.0
Duzib264G0901 Durio zibethinus HOM05D007927 ORTHO05D010029 6.8e-72 274.6 238 64.3
COL.COLO4_35756 Corchorus olitorius HOM05D007927 ORTHO05D010029 4.4e-71 271.9 239 66.1
Thecc.01G133600 Theobroma cacao HOM05D007927 ORTHO05D010029 2.8e-70 269.2 239 64.9
Atru.chr4.915 Acer truncatum HOM05D007927 ORTHO05D010029 3.7e-70 268.9 236 65.7
PGR102G3035 Punica granatum HOM05D007927 ORTHO05D010029 8.3e-70 267.7 241 63.5
TAR628G1503 Trochodendron aralioides HOM05D007927 ORTHO05D010029 1.1e-69 267.3 235 64.3
Phvul.002G272300 Phaseolus vulgaris HOM05D007927 ORTHO05D010029 2.4e-69 266.2 231 63.2
TWI75G1488 Tripterygium wilfordii HOM05D007927 ORTHO05D010029 2.4e-69 266.2 236 63.6
Ciclev10002360m.g Citrus clementina HOM05D007927 ORTHO05D010029 3.1e-69 265.8 238 63.0
Lj4g0020524 Lotus japonicus HOM05D007927 ORTHO05D010029 7.0e-69 264.6 237 62.4
Hma1.2p1_0476F.1_g160770 Hydrangea macrophylla HOM05D007927 ORTHO05D010029 9.1e-69 264.2 242 63.2
Eucgr.J01289 Eucalyptus grandis HOM05D007927 ORTHO05D010029 1.2e-68 263.8 232 66.4
Glyma.05G191900 Glycine max HOM05D007927 ORTHO05D010029 1.2e-68 263.8 231 64.1
VMungo0251G0724 Vigna mungo HOM05D007927 ORTHO05D010029 7.7e-68 261.2 231 62.3
Rhsim08G0002700 Rhododendron simsii HOM05D007927 ORTHO05D010029 2.3e-67 259.6 161 79.5
Dinv24372 Davidia involucrata HOM05D007927 ORTHO05D010029 5.0e-67 258.5 246 60.2
Nn1g06275 Nelumbo nucifera HOM05D007927 ORTHO05D010029 1.9e-66 256.5 203 69.0
GSVIVG01026475001 Vitis vinifera HOM05D007927 ORTHO05D010029 1.9e-66 256.5 231 63.2
CSS0028810 Camellia sinensis var. sinensis HOM05D007927 ORTHO05D010029 2.5e-66 256.1 232 62.5
Medtr8g093750 Medicago truncatula HOM05D007927 ORTHO05D010029 4.2e-66 255.4 239 59.8
Manes.13G085601 Manihot esculenta HOM05D007927 ORTHO05D010029 5.5e-66 255.0 235 62.1
Psat7g045960 Pisum sativum HOM05D007927 ORTHO05D010029 7.2e-66 254.6 238 62.2
Haze_25255 Corylus avellana HOM05D007927 ORTHO05D010029 1.6e-65 253.4 262 60.3
Gohir.D09G003800 Gossypium hirsutum HOM05D007927 ORTHO05D010029 3.6e-65 252.3 235 63.4
Potri.005G063600 Populus trichocarpa HOM05D007927 ORTHO05D010029 8.0e-65 251.1 240 60.0
TPR.G37352 Trifolium pratense HOM05D007927 ORTHO05D010029 8.0e-65 251.1 243 61.7
Dinv07117 Davidia involucrata HOM05D007927 ORTHO05D010029 1.8e-64 250.0 245 60.0
Aqoxy5G02324 Aquilegia oxysepala HOM05D007927 ORTHO05D010029 2.3e-64 249.6 233 62.2
Actinidia01389 Actinidia chinensis HOM05D007927 ORTHO05D010029 4.0e-64 248.8 168 75.6
DCAR_014334 Daucus carota HOM05D007927 ORTHO05D010029 4.0e-64 248.8 199 65.8
Gohir.A09G004300 Gossypium hirsutum HOM05D007927 ORTHO05D010029 5.2e-64 248.4 235 62.6
Cfa002902 Carpinus fangiana HOM05D007927 ORTHO05D001116 6.8e-64 248.1 156 78.8
MBI03_g42544_MAGBIO Magnolia biondii HOM05D007927 ORTHO05D010029 2.6e-63 246.1 228 61.8
MBI03_g37385_MAGBIO Magnolia biondii HOM05D007927 ORTHO05D010029 3.4e-63 245.7 228 61.8
vmacro18670 Vaccinium macrocarpon HOM05D007927 ORTHO05D010029 3.4e-63 245.7 236 61.4
Lj4A837T13 Lonicera japonica HOM05D007927 ORTHO05D010029 1.3e-62 243.8 234 59.0
Cpa.g.sc42.162 Carica papaya HOM05D007927 ORTHO05D010029 2.8e-62 242.7 223 61.4
Ca_17635_v3 Cicer arietinum L. HOM05D007927 ORTHO05D010029 2.8e-62 242.7 155 76.8
Lsat_1_v5_gn_5_69000 Lactuca sativa HOM05D007927 ORTHO05D010029 1.4e-61 240.4 244 57.0
ATR0584G243 Amborella trichopoda HOM05D007927 ORTHO05D010029 9.2e-61 237.7 164 73.2
Gorai.006G005200 Gossypium raimondii HOM05D007927 ORTHO05D010029 1.7e-59 233.4 227 61.2
Lalb_Chr07g0184391 Lupinus albus HOM05D007927 ORTHO05D010029 2.3e-59 233.0 234 58.5
Os12g0189700 Oryza sativa ssp. japonica HOM05D007927 ORTHO05D010029 1.1e-58 230.7 159 69.8
CDE02G1961 Ceratophyllum demersum HOM05D007927 ORTHO05D010029 4.3e-58 228.8 229 57.6
ECA233G3055 Erigeron canadensis HOM05D007927 ORTHO05D010029 1.6e-57 226.9 244 53.3
MELO3C023232.2 Cucumis melo HOM05D007927 ORTHO05D010029 2.1e-57 226.5 220 61.8
HanXRQChr12g0380561 Helianthus annuus HOM05D007927 ORTHO05D010029 1.4e-56 223.8 171 67.8
SEGI_35752 Sequoiadendron giganteum HOM05D007927 ORTHO05D010029 2.0e-52 209.9 234 52.6
Pp3c24_20210 Physcomitrium patens HOM05D007927 ORTHO05D010029 3.1e-48 196.1 160 59.4
AagrBONN_evm.TU.Sc2ySwM_344.4939 Anthoceros agrestis HOM05D007927 ORTHO05D010029 2.6e-47 193.0 214 49.1
Sabra07G0086100 Salix brachista HOM05D007927 ORTHO05D010029 2.8e-41 172.9 96 83.3
FAN19G2631 Fragaria x ananassa HOM05D007927 ORTHO05D010029 1.4e-40 170.6 179 60.9
Mapoly0115s0058 Marchantia polymorpha HOM05D007927 ORTHO05D010029 1.8e-40 170.2 190 48.9
FAN23G0137 Fragaria x ananassa HOM05D007927 ORTHO05D010029 2.1e-36 156.8 144 64.6
Lj4C838G8 Lonicera japonica HOM05D007927 ORTHO05D010029 6.0e-36 155.2 234 44.9
Sabra05G0052800 Salix brachista HOM05D007927 ORTHO05D010029 2.3e-35 153.3 231 45.0
SEGI_09554 Sequoiadendron giganteum HOM05D007927 ORTHO05D010029 4.4e-31 139.0 89 75.3
Cre01.g055151 Chlamydomonas reinhardtii HOM05D007927 ORTHO05D010029 2.7e-20 103.2 135 39.3
FvH4_1g24060 Fragaria vesca HOM05D007927 ORTHO05D010029 4.5e-15 85.9 51 80.4
Sabra07G0086200 Salix brachista HOM05D007927 ORTHO05D010029 4.9e-14 82.4 129 48.1
Gohir.D09G047700 Gossypium hirsutum HOM05D007927 ORTHO05D010029 7.1e-13 78.6 47 76.6
Gohir.D01G107700 Gossypium hirsutum HOM05D005170 ORTHO05D010029 1.2e-12 77.8 49 71.4
Gohir.D06G120200 Gossypium hirsutum HOM05D005170 ORTHO05D010029 1.6e-12 77.4 49 69.4
Gohir.D03G074800 Gossypium hirsutum HOM05D007927 ORTHO05D010029 2.1e-12 77.0 46 76.1
Gorai.010G138300 Gossypium raimondii HOM05D007927 ORTHO05D010029 3.5e-12 76.3 47 72.3
Gorai.009G413100 Gossypium raimondii HOM05D007927 ORTHO05D010029 5.1e-11 72.4 47 70.2
Gohir.D04G109100 Gossypium hirsutum HOM05D007927 ORTHO05D010029 1.3e-09 67.8 47 68.1
Mapoly0178s0020 Marchantia polymorpha HOM05D019817 ORTHO05D016515 4.5e-07 59.3 92 34.8
SEGI_14611 Sequoiadendron giganteum HOM05D019817 ORTHO05D016515 1.0e-06 58.2 121 29.8
Pp3c2_6800 Physcomitrium patens HOM05D019817 ORTHO05D016515 3.8e-06 56.2 245 24.5


User provided reference genes

Program Settings