Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD01G1003600 Malus domestica HOM05D007437 ORTHO05D009422 2.3e-92 342.4 197 100.0
Prupe.6G157800 Prunus persica HOM05D007437 ORTHO05D009422 1.4e-49 200.3 151 70.9
TAR628G0551 Trochodendron aralioides HOM05D007437 ORTHO05D009422 3.4e-48 195.7 142 76.1
Dinv24359 Davidia involucrata HOM05D007437 ORTHO05D009422 4.9e-47 191.8 152 64.5
QL10p043643 Quercus lobata HOM05D007437 ORTHO05D009422 8.4e-47 191.0 154 64.3
ClCG01G015390 Citrullus lanatus HOM05D007437 ORTHO05D009422 1.4e-46 190.3 156 63.5
MELO3C008059.2 Cucumis melo HOM05D007437 ORTHO05D009422 4.2e-46 188.7 157 62.4
QL05p004660 Quercus lobata HOM05D007437 ORTHO05D009422 4.2e-46 188.7 155 62.6
TWI31G0094 Tripterygium wilfordii HOM05D007437 ORTHO05D009422 4.2e-46 188.7 151 62.9
Potri.007G106500 Populus trichocarpa HOM05D007437 ORTHO05D009422 5.5e-46 188.3 144 64.6
RcHm_v2.0_Chr2g0120841 Rosa chinensis HOM05D007437 ORTHO05D009422 7.1e-46 188.0 150 64.0
CiPaw.04G082500 Carya illinoinensis HOM05D007437 ORTHO05D009422 1.6e-45 186.8 137 68.6
FAN23G1428 Fragaria x ananassa HOM05D007437 ORTHO05D009422 1.6e-45 186.8 155 63.9
FAN23G2875 Fragaria x ananassa HOM05D007437 ORTHO05D009422 1.6e-45 186.8 155 63.9
FAN26G0277 Fragaria x ananassa HOM05D007437 ORTHO05D009422 2.7e-45 186.0 155 63.9
Haze_25232 Corylus avellana HOM05D007437 ORTHO05D009422 1.3e-44 183.7 177 58.8
FvH4_1g24330 Fragaria vesca HOM05D007437 ORTHO05D009422 1.3e-44 183.7 155 63.2
FAN19G0121 Fragaria x ananassa HOM05D007437 ORTHO05D009422 1.8e-44 183.3 155 63.2
Sed0017320 Sechium edule HOM05D007437 ORTHO05D009422 3.9e-44 182.2 154 62.3
CsaV3_6G041610 Cucumis sativus L. HOM05D007437 ORTHO05D009422 1.9e-43 179.9 156 71.2
Thecc.01G131700 Theobroma cacao HOM05D007437 ORTHO05D009422 5.7e-43 178.3 160 65.0
GSVIVG01026485001 Vitis vinifera HOM05D007437 ORTHO05D009422 5.7e-43 178.3 154 61.0
PGR119G2133 Punica granatum HOM05D007437 ORTHO05D009422 9.6e-43 177.6 155 60.0
Nn5g28551 Nelumbo nucifera HOM05D007437 ORTHO05D009422 3.7e-42 175.6 154 60.4
Oeu033664.1 Olea europaea HOM05D007437 ORTHO05D009422 3.7e-42 175.6 155 61.3
unitig_699.g19721 Utricularia gibba HOM05D007437 ORTHO05D009422 4.8e-42 175.3 153 59.5
Glyma.06G153400 Glycine max HOM05D007437 ORTHO05D009422 6.2e-42 174.9 152 60.5
Actinidia20077 Actinidia chinensis HOM05D007437 ORTHO05D009422 1.4e-41 173.7 159 61.0
MSTRG.23461 Avicennia marina HOM05D007437 ORTHO05D009422 1.4e-41 173.7 152 59.9
CANSAT01G2130 Cannabis sativa HOM05D007437 ORTHO05D009422 1.4e-41 173.7 157 69.4
Ciclev10002727m.g Citrus clementina HOM05D007437 ORTHO05D009422 1.8e-41 173.3 152 63.8
Duzib264G1294 Durio zibethinus HOM05D007437 ORTHO05D009422 4.0e-41 172.2 165 61.8
Lalb_Chr11g0068441 Lupinus albus HOM05D007437 ORTHO05D009422 5.3e-41 171.8 199 50.8
COL.COLO4_35739 Corchorus olitorius HOM05D007437 ORTHO05D009422 6.9e-41 171.4 162 58.6
Gorai.011G119800 Gossypium raimondii HOM05D007437 ORTHO05D009422 1.2e-40 170.6 167 57.5
AUR62003561 Chenopodium quinoa HOM05D007437 ORTHO05D009422 1.5e-40 170.2 152 57.9
AUR62017875 Chenopodium quinoa HOM05D007437 ORTHO05D009422 1.5e-40 170.2 152 57.9
Gohir.D10G109201 Gossypium hirsutum HOM05D007437 ORTHO05D009422 2.0e-40 169.9 167 57.5
Migut.L00964 Erythranthe guttata HOM05D007437 ORTHO05D009422 2.6e-40 169.5 153 60.8
Gohir.A10G156422 Gossypium hirsutum HOM05D007437 ORTHO05D009422 4.5e-40 168.7 166 69.3
Aqoxy5G02234 Aquilegia oxysepala HOM05D007437 ORTHO05D009422 5.8e-40 168.3 147 59.9
Atru.chr4.895 Acer truncatum HOM05D007437 ORTHO05D009422 1.0e-39 167.5 163 62.0
DCAR_014338 Daucus carota HOM05D007437 ORTHO05D009422 1.0e-39 167.5 139 69.8
Duzib147G0634 Durio zibethinus HOM05D007437 ORTHO05D009422 1.3e-39 167.2 80 93.8
Hma1.2p1_0050F.1_g029150 Hydrangea macrophylla HOM05D007437 ORTHO05D009422 1.3e-39 167.2 166 63.9
Cc07_g18480 Coffea canephora HOM05D007437 ORTHO05D009422 1.7e-39 166.8 157 64.3
CSS0043391 Camellia sinensis var. sinensis HOM05D007437 ORTHO05D009422 2.2e-39 166.4 172 65.7
arahy.Tifrunner.gnm1.ann1.1RKJ3P Arachis hypogaea HOM05D007437 ORTHO05D009422 5.0e-39 165.2 116 77.6
Lsat_1_v5_gn_2_37340 Lactuca sativa HOM05D007437 ORTHO05D009422 5.0e-39 165.2 80 90.0
Manes.13G087100 Manihot esculenta HOM05D007437 ORTHO05D009422 5.0e-39 165.2 142 59.9
HanXRQChr14g0433361 Helianthus annuus HOM05D007437 ORTHO05D009422 6.5e-39 164.9 80 91.2
VMungo1309G0428 Vigna mungo HOM05D007437 ORTHO05D009422 8.4e-39 164.5 152 57.2
Eucgr.I00205 Eucalyptus grandis HOM05D007437 ORTHO05D009422 1.1e-38 164.1 165 54.5
SalBow6G6692 Salvia bowleyana HOM05D007437 ORTHO05D009422 1.1e-38 164.1 80 91.2
ECA238G2185 Erigeron canadensis HOM05D007437 ORTHO05D009422 1.9e-38 163.3 80 90.0
Medtr3g096290 Medicago truncatula HOM05D007437 ORTHO05D009422 1.9e-38 163.3 154 62.3
Aa31LG4G5100 Aethionema arabicum HOM05D007437 ORTHO05D009422 2.5e-38 162.9 80 91.2
AT1G74880 Arabidopsis thaliana HOM05D007437 ORTHO05D009422 2.5e-38 162.9 152 57.2
BraA07t31596Z Brassica rapa HOM05D007437 ORTHO05D009422 2.5e-38 162.9 81 87.7
Thhalv10019178m.g Eutrema salsugineum HOM05D007437 ORTHO05D009422 3.2e-38 162.5 80 88.8
THA.LOC104813856 Tarenaya hassleriana HOM05D007437 ORTHO05D009422 3.2e-38 162.5 153 58.8
AL2G34760 Arabidopsis lyrata HOM05D007437 ORTHO05D009422 4.2e-38 162.2 80 88.8
Carub.0002s2167 Capsella rubella HOM05D007437 ORTHO05D009422 4.2e-38 162.2 80 88.8
MBI03_g35294_MAGBIO Magnolia biondii HOM05D007437 ORTHO05D009422 5.5e-38 161.8 80 88.8
A07p40510 Brassica napus HOM05D007437 ORTHO05D009422 7.1e-38 161.4 80 87.5
C06p48900 Brassica napus HOM05D007437 ORTHO05D009422 7.1e-38 161.4 80 87.5
BolC6t39926H Brassica oleracea HOM05D007437 ORTHO05D009422 7.1e-38 161.4 80 87.5
ATR1136G110 Amborella trichopoda HOM05D007437 ORTHO05D009422 9.3e-38 161.0 80 88.8
Phvul.009G150600 Phaseolus vulgaris HOM05D007437 ORTHO05D009422 9.3e-38 161.0 152 55.9
Ca_16946_v3 Cicer arietinum L. HOM05D007437 ORTHO05D009422 1.2e-37 160.6 147 70.1
Ca_16965_v3 Cicer arietinum L. HOM05D007437 ORTHO05D009422 1.2e-37 160.6 147 70.1
PSO017G4908 Papaver somniferum HOM05D007437 ORTHO05D009422 2.7e-37 159.5 164 56.1
Solyc11g006020.2 Solanum lycopersicum HOM05D007437 ORTHO05D009422 2.7e-37 159.5 80 86.2
Nitab4.5_0000856g0100 Nicotiana tabacum HOM05D007437 ORTHO05D009422 3.5e-37 159.1 80 86.2
Nitab4.5_0008132g0030 Nicotiana tabacum HOM05D007437 ORTHO05D009422 3.5e-37 159.1 80 86.2
CARHR068200 Cardamine hirsuta HOM05D007437 ORTHO05D009422 4.6e-37 158.7 80 87.5
Psat5g062800 Pisum sativum HOM05D007437 ORTHO05D009422 4.6e-37 158.7 160 61.9
CAN.G582.8 Capsicum annuum HOM05D007437 ORTHO05D009422 6.1e-37 158.3 80 85.0
Rhsim10G0134900 Rhododendron simsii HOM05D007437 ORTHO05D009422 6.1e-37 158.3 80 87.5
Cpa.g.sc42.157 Carica papaya HOM05D007437 ORTHO05D009422 1.8e-36 156.8 187 56.7
Lj1g0016732 Lotus japonicus HOM05D007437 ORTHO05D009422 3.0e-36 156.0 155 61.9
SEGI_02322 Sequoiadendron giganteum HOM05D007437 ORTHO05D009422 3.9e-36 155.6 80 86.2
Migut.L00881 Erythranthe guttata HOM05D007437 ORTHO05D009422 5.1e-36 155.2 76 89.5
Zm00001eb362560 Zea mays HOM05D007437 ORTHO05D009422 5.1e-36 155.2 81 84.0
PSO170G6470 Papaver somniferum HOM05D007437 ORTHO05D009422 6.7e-36 154.8 163 52.8
AagrBONN_evm.TU.Sc2ySwM_344.3842 Anthoceros agrestis HOM05D007437 ORTHO05D009422 8.7e-36 154.5 80 82.5
vmacro12802 Vaccinium macrocarpon HOM05D007437 ORTHO05D009422 1.3e-34 150.6 78 84.6
SMO367G0120 Selaginella moellendorffii HOM05D000331 ORTHO05D002018 8.2e-34 147.9 76 85.5
Sopen11g001960 Solanum pennellii HOM05D007437 ORTHO05D009422 5.3e-33 145.2 102 67.6
Os01g0959900 Oryza sativa ssp. japonica HOM05D007437 ORTHO05D009422 6.9e-33 144.8 76 81.6
SMO367G1275 Selaginella moellendorffii HOM05D007437 ORTHO05D009422 9.0e-33 144.4 75 84.0
TPR.G28241 Trifolium pratense HOM05D007437 ORTHO05D009422 9.0e-33 144.4 73 87.7
CDE08G0468 Ceratophyllum demersum HOM05D005037 ORTHO05D006274 7.7e-32 141.4 77 80.5
EL10Ac6g15309 Beta vulgaris HOM05D007437 ORTHO05D009422 4.2e-30 135.6 152 52.0
Mapoly0090s0072 Marchantia polymorpha HOM05D007437 ORTHO05D009422 3.6e-29 132.5 79 69.6
Pp3c1_14760 Physcomitrium patens HOM05D007437 ORTHO05D009422 1.0e-28 131.0 78 74.4
Peaxi162Scf00183g00218 Petunia axillaris HOM05D007437 ORTHO05D009422 3.3e-27 125.9 80 72.5
BcaC08g46922 Brassica carinata HOM05D007437 ORTHO05D009422 5.7e-27 125.2 65 84.6
Sp5g30020 Schrenkiella parvula HOM05D007437 ORTHO05D009422 9.7e-27 124.4 69 76.8
CBR_g29941 Chara braunii HOM05D007437 ORTHO05D009422 6.9e-25 118.2 80 67.5
QL05p004576 Quercus lobata HOM05D007437 ORTHO05D009422 9.1e-25 117.9 59 84.7
CDE02G1359 Ceratophyllum demersum HOM05D007437 ORTHO05D009422 2.5e-22 109.8 123 48.8
arahy.Tifrunner.gnm1.ann1.E1UNHC Arachis hypogaea HOM05D007437 ORTHO05D009422 5.7e-19 98.6 82 73.2


User provided reference genes

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