Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD00G1207100 Malus domestica HOM05D015853 ORTHO05D000119 7.6e-82 307.0 142 100.0
MD04G1242900 Malus domestica HOM05D015853 ORTHO05D000119 9.9e-82 306.6 142 99.3
MD04G1242500 Malus domestica HOM05D015853 ORTHO05D000119 1.5e-74 282.7 143 90.9
MD04G1243000 Malus domestica HOM05D015853 ORTHO05D000119 1.5e-74 282.7 143 90.9
MD00G1207200 Malus domestica HOM05D015853 ORTHO05D000119 7.6e-74 280.4 143 90.2
MD04G1242200 Malus domestica HOM05D015853 ORTHO05D000119 1.9e-64 249.2 140 83.6
Prupe.4G273700 Prunus persica HOM05D015853 ORTHO05D000119 2.0e-26 122.9 130 46.2
MD15G1135600 Malus domestica HOM05D015853 ORTHO05D000119 7.7e-26 120.9 144 46.5
FAN19G2757 Fragaria x ananassa HOM05D000256 ORTHO05D000119 1.3e-17 93.6 135 40.0
CSS0039783 Camellia sinensis var. sinensis HOM05D000256 ORTHO05D000119 2.5e-16 89.4 111 40.5
MD06G1007800 Malus domestica HOM05D015853 ORTHO05D000119 1.6e-15 86.7 143 38.5
MD06G1010600 Malus domestica HOM05D000256 ORTHO05D000119 2.3e-14 82.8 116 39.7
Ciclev10007065m.g Citrus clementina HOM05D000256 ORTHO05D000119 2.8e-12 75.9 144 33.3
AT4G16195 Arabidopsis thaliana HOM05D000256 ORTHO05D000119 8.3e-12 74.3 120 35.0
PGR083G1396 Punica granatum HOM05D000256 ORTHO05D000119 1.4e-11 73.6 138 36.2
BraA03t09878Z Brassica rapa HOM05D000256 ORTHO05D000119 3.1e-11 72.4 144 34.0
Nn1g08794 Nelumbo nucifera HOM05D000256 ORTHO05D000119 4.1e-11 72.0 110 31.8
AL7G38890 Arabidopsis lyrata HOM05D000256 ORTHO05D000119 9.2e-11 70.9 127 33.9
Carub.0006s1058 Capsella rubella HOM05D000256 ORTHO05D000119 3.5e-10 68.9 146 31.5
AT5G12060 Arabidopsis thaliana HOM05D000256 ORTHO05D000119 7.8e-10 67.8 116 33.6
Manes.03G153600 Manihot esculenta HOM05D000256 ORTHO05D000119 7.8e-10 67.8 132 32.6
BcaC02g12403 Brassica carinata HOM05D000256 ORTHO05D000119 1.0e-09 67.4 145 31.7
Prupe.1G026600 Prunus persica HOM05D000256 ORTHO05D000119 1.3e-09 67.0 138 30.4
THA.LOC104814028 Tarenaya hassleriana HOM05D000256 ORTHO05D000119 1.3e-09 67.0 111 35.1
AL6G22850 Arabidopsis lyrata HOM05D000256 ORTHO05D000119 1.7e-09 66.6 139 30.9
Glyma.13G116500 Glycine max HOM05D000256 ORTHO05D000119 3.8e-09 65.5 138 32.6
RcHm_v2.0_Chr4g0397211 Rosa chinensis HOM05D000256 ORTHO05D000119 3.8e-09 65.5 136 32.4
AT5G12070 Arabidopsis thaliana HOM05D000256 ORTHO05D000119 5.0e-09 65.1 139 30.9
MD09G1134100 Malus domestica HOM05D000256 ORTHO05D000119 5.0e-09 65.1 135 34.1
Thhalv10022389m.g Eutrema salsugineum HOM05D000256 ORTHO05D000119 6.6e-09 64.7 126 34.9
Sed0024573 Sechium edule HOM05D000256 ORTHO05D000119 6.6e-09 64.7 135 31.9
Aa31LG2G14700 Aethionema arabicum HOM05D000256 ORTHO05D000119 8.6e-09 64.3 124 33.1
AT3G17080 Arabidopsis thaliana HOM05D000256 ORTHO05D000119 8.6e-09 64.3 132 32.6
A09p43180 Brassica napus HOM05D000256 ORTHO05D000119 2.5e-08 62.8 114 34.2
MELO3C030137.2 Cucumis melo HOM05D000256 ORTHO05D000119 2.5e-08 62.8 116 32.8
BcaB04g18362 Brassica carinata HOM05D000256 ORTHO05D000119 4.3e-08 62.0 137 31.4
CARHR092330 Cardamine hirsuta HOM05D000256 ORTHO05D000119 4.3e-08 62.0 136 33.1
AL6G22860 Arabidopsis lyrata HOM05D000256 ORTHO05D000119 5.6e-08 61.6 116 31.0
CARHR259490 Cardamine hirsuta HOM05D000256 ORTHO05D000119 5.6e-08 61.6 114 31.6
Lalb_Chr07g0181531 Lupinus albus HOM05D000256 ORTHO05D000119 5.6e-08 61.6 112 32.1
Ciclev10027477m.g Citrus clementina HOM05D000256 ORTHO05D000119 7.3e-08 61.2 151 27.2
Phvul.003G125200 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 7.3e-08 61.2 113 33.6
Prupe.1G062000 Prunus persica HOM05D000256 ORTHO05D000119 9.5e-08 60.8 138 29.0
Aa31LG2G14660 Aethionema arabicum HOM05D000256 ORTHO05D000119 1.2e-07 60.5 108 33.3
Aa31LG2G15360 Aethionema arabicum HOM05D000256 ORTHO05D000119 1.2e-07 60.5 117 32.5
BolC3t13132H Brassica oleracea HOM05D000256 ORTHO05D000119 1.2e-07 60.5 121 33.1
Thhalv10015390m.g Eutrema salsugineum HOM05D000256 ORTHO05D000119 1.2e-07 60.5 145 31.0
Manes.03G153400 Manihot esculenta HOM05D000256 ORTHO05D000119 1.2e-07 60.5 136 30.1
CANSAT78G2337 Cannabis sativa HOM05D000256 ORTHO05D000119 1.6e-07 60.1 125 31.2
Manes.03G153950 Manihot esculenta HOM05D000256 ORTHO05D000119 1.6e-07 60.1 130 30.8
Manes.03G153351 Manihot esculenta HOM05D000256 ORTHO05D000119 2.1e-07 59.7 132 29.5
Manes.03G153500 Manihot esculenta HOM05D000256 ORTHO05D000119 2.1e-07 59.7 135 30.4
PGR042G2813 Punica granatum HOM05D000256 ORTHO05D000119 2.1e-07 59.7 138 31.9
Sp3g15180 Schrenkiella parvula HOM05D000256 ORTHO05D000119 2.8e-07 59.3 125 32.0
CANSAT78G0785 Cannabis sativa HOM05D000256 ORTHO05D000119 3.6e-07 58.9 143 29.4
Manes.03G153800 Manihot esculenta HOM05D000256 ORTHO05D000119 3.6e-07 58.9 137 28.5
Ciclev10026952m.g Citrus clementina HOM05D000256 ORTHO05D000119 4.7e-07 58.5 117 32.5
Lj2g0009295 Lotus japonicus HOM05D000256 ORTHO05D000119 4.7e-07 58.5 112 32.1
GSVIVG01014872001 Vitis vinifera HOM05D000256 ORTHO05D000119 4.7e-07 58.5 132 29.5
Aa31LG2G14620 Aethionema arabicum HOM05D000256 ORTHO05D000119 6.1e-07 58.2 107 33.6
Lsat_1_v5_gn_0_4660 Lactuca sativa HOM05D000256 ORTHO05D000119 6.1e-07 58.2 143 28.0
Prupe.1G058100 Prunus persica HOM05D000256 ORTHO05D000119 8.0e-07 57.8 114 32.5
EL10Ac1g01186 Beta vulgaris HOM05D000256 ORTHO05D000119 1.0e-06 57.4 119 33.6
A03p05380 Brassica napus HOM05D000256 ORTHO05D000119 1.0e-06 57.4 117 32.5
BraA03t09877Z Brassica rapa HOM05D000256 ORTHO05D000119 1.0e-06 57.4 117 32.5
MD17G1123000 Malus domestica HOM05D000256 ORTHO05D000119 1.0e-06 57.4 136 32.4
RcHm_v2.0_Chr4g0396771 Rosa chinensis HOM05D000256 ORTHO05D000119 1.4e-06 57.0 110 35.5
BcaB01g05431 Brassica carinata HOM05D000256 ORTHO05D000119 1.8e-06 56.6 147 31.3
Phvul.007G112600 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 1.8e-06 56.6 125 32.8
Atru.chr8.2528 Acer truncatum HOM05D000256 ORTHO05D000119 2.3e-06 56.2 95 32.6
MELO3C027025.2 Cucumis melo HOM05D000256 ORTHO05D000119 2.3e-06 56.2 120 34.2
Medtr6g004310 Medicago truncatula HOM05D000256 ORTHO05D000119 2.3e-06 56.2 117 30.8
Prupe.1G058600 Prunus persica HOM05D000256 ORTHO05D000119 2.3e-06 56.2 108 34.3
Prupe.1G058900 Prunus persica HOM05D000256 ORTHO05D000119 2.3e-06 56.2 108 34.3
Atru.chr4.1735 Acer truncatum HOM05D000256 ORTHO05D000119 3.0e-06 55.8 91 38.5
Atru.chr4.1808 Acer truncatum HOM05D000256 ORTHO05D000119 3.0e-06 55.8 91 34.1
Sed0027363 Sechium edule HOM05D000256 ORTHO05D000119 3.0e-06 55.8 140 27.9
THA.LOC104820439 Tarenaya hassleriana HOM05D005246 ORTHO05D000119 4.0e-06 55.5 124 33.1
CANSAT78G0119 Cannabis sativa HOM05D000256 ORTHO05D000119 5.2e-06 55.1 139 27.3
Ciclev10006406m.g Citrus clementina HOM05D000256 ORTHO05D000119 5.2e-06 55.1 138 25.4
Ciclev10006611m.g Citrus clementina HOM05D000256 ORTHO05D000119 5.2e-06 55.1 138 28.3
Ciclev10006673m.g Citrus clementina HOM05D000256 ORTHO05D000119 5.2e-06 55.1 138 25.4
Ciclev10006952m.g Citrus clementina HOM05D000256 ORTHO05D000119 5.2e-06 55.1 102 34.3
C03p06210 Brassica napus HOM05D000256 ORTHO05D000119 6.8e-06 54.7 117 31.6
BolC3t13128H Brassica oleracea HOM05D000256 ORTHO05D000119 6.8e-06 54.7 117 31.6
BolC3t13135H Brassica oleracea HOM05D000256 ORTHO05D000119 6.8e-06 54.7 108 34.3
CAN.G194.35 Capsicum annuum HOM05D000256 ORTHO05D000119 6.8e-06 54.7 111 32.4
Phvul.011G169288 Phaseolus vulgaris HOM05D000256 ORTHO05D000119 6.8e-06 54.7 91 38.5
Prupe.1G059000 Prunus persica HOM05D000256 ORTHO05D000119 6.8e-06 54.7 108 35.2
QL02p097446 Quercus lobata HOM05D013890 ORTHO05D016266 6.8e-06 54.7 114 33.3


User provided reference genes

Program Settings