Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD00G1120800 Malus domestica HOM05D006254 ORTHO05D007409 3.7e-122 441.4 205 100.0
MD11G1078400 Malus domestica HOM05D006254 ORTHO05D007409 3.2e-121 438.3 205 99.5
MD03G1072300 Malus domestica HOM05D006254 ORTHO05D007409 6.4e-82 307.8 168 83.9
Prupe.6G059200 Prunus persica HOM05D006254 ORTHO05D007409 1.8e-79 299.7 168 83.9
MD00G1120300 Malus domestica HOM05D006254 ORTHO05D007409 2.1e-77 292.7 153 88.2
Potri.004G137900 Populus trichocarpa HOM05D006254 ORTHO05D007409 1.8e-68 263.1 166 71.1
Hma1.2p1_0057F.1_g032170 Hydrangea macrophylla HOM05D006254 ORTHO05D007409 2.4e-68 262.7 160 74.4
Gorai.012G045500 Gossypium raimondii HOM05D006254 ORTHO05D007409 1.2e-67 260.4 156 74.4
Dinv02479 Davidia involucrata HOM05D006254 ORTHO05D007409 2.0e-67 259.6 160 74.4
Gohir.A05G375400 Gossypium hirsutum HOM05D006254 ORTHO05D007409 3.4e-67 258.8 156 74.4
Manes.12G085200 Manihot esculenta HOM05D006254 ORTHO05D007409 1.7e-66 256.5 158 69.6
QL10p038598 Quercus lobata HOM05D006254 ORTHO05D007409 1.7e-66 256.5 169 69.2
HanXRQChr01g0017761 Helianthus annuus HOM05D006254 ORTHO05D007409 8.4e-66 254.2 166 67.5
TWI31G0260 Tripterygium wilfordii HOM05D006254 ORTHO05D007409 1.9e-65 253.1 157 72.0
FAN21G3787 Fragaria x ananassa HOM05D006254 ORTHO05D007409 2.5e-65 252.7 157 74.5
FvH4_3g38370 Fragaria vesca HOM05D006254 ORTHO05D007409 3.2e-65 252.3 157 74.5
CSS0012450 Camellia sinensis var. sinensis HOM05D006254 ORTHO05D007409 1.6e-64 250.0 160 70.6
TAR628G1014 Trochodendron aralioides HOM05D006254 ORTHO05D007409 1.6e-64 250.0 160 71.2
Cc07_g20930 Coffea canephora HOM05D006254 ORTHO05D007409 2.7e-64 249.2 158 71.5
ECA248G3109 Erigeron canadensis HOM05D006254 ORTHO05D007409 4.6e-64 248.4 156 68.6
FAN25G1911 Fragaria x ananassa HOM05D006254 ORTHO05D007409 1.0e-63 247.3 157 73.2
MELO3C033099.2 Cucumis melo HOM05D006254 ORTHO05D007409 1.3e-63 246.9 155 71.6
CiPaw.04G178100 Carya illinoinensis HOM05D006254 ORTHO05D007409 2.3e-63 246.1 160 68.1
CsaV3_4G030320 Cucumis sativus L. HOM05D006254 ORTHO05D007409 3.0e-63 245.7 155 71.0
Cpa.g.sc138.23 Carica papaya HOM05D006254 ORTHO05D007409 5.1e-63 245.0 157 68.2
GSVIVG01000233001 Vitis vinifera HOM05D003183 ORTHO05D007409 2.5e-62 242.7 160 70.0
Peaxi162Scf00030g00012 Petunia axillaris HOM05D006254 ORTHO05D007409 3.3e-62 242.3 160 66.2
CANSAT54G2690 Cannabis sativa HOM05D006254 ORTHO05D007409 4.3e-62 241.9 160 69.4
vmacro10394 Vaccinium macrocarpon HOM05D006254 ORTHO05D007409 4.3e-62 241.9 172 65.7
Psat7g040840 Pisum sativum HOM05D006254 ORTHO05D007409 1.3e-61 240.4 158 70.3
Cfa002251 Carpinus fangiana HOM05D006254 ORTHO05D007409 1.6e-61 240.0 160 65.6
Thhalv10016597m.g Eutrema salsugineum HOM05D006254 ORTHO05D007409 2.1e-61 239.6 158 66.5
Carub.0001s3633 Capsella rubella HOM05D006254 ORTHO05D007409 2.8e-61 239.2 158 65.2
TPR.G12754 Trifolium pratense HOM05D006254 ORTHO05D007409 2.8e-61 239.2 160 67.5
THA.LOC104803663 Tarenaya hassleriana HOM05D006254 ORTHO05D007409 3.7e-61 238.8 157 68.8
Sopen03g020950 Solanum pennellii HOM05D006254 ORTHO05D007409 4.8e-61 238.4 160 65.0
FAN11G0663 Fragaria x ananassa HOM05D006254 ORTHO05D007409 6.3e-61 238.0 149 73.8
Medtr8g095410 Medicago truncatula HOM05D006254 ORTHO05D007409 6.3e-61 238.0 158 69.0
MSTRG.23507 Avicennia marina HOM05D006254 ORTHO05D007409 8.2e-61 237.7 169 63.9
Sp4g18960 Schrenkiella parvula HOM05D006254 ORTHO05D007409 8.2e-61 237.7 158 63.3
AL1G53850 Arabidopsis lyrata HOM05D006254 ORTHO05D007409 1.1e-60 237.3 158 65.8
Solyc03g078230.3 Solanum lycopersicum HOM05D006254 ORTHO05D007409 1.8e-60 236.5 160 64.4
Eucgr.I00013 Eucalyptus grandis HOM05D006254 ORTHO05D007409 5.3e-60 235.0 166 63.3
SGA_v2.0_scaffold54G19570 Striga asiatica HOM05D006254 ORTHO05D007409 1.2e-59 233.8 157 65.6
AT1G47570 Arabidopsis thaliana HOM05D006254 ORTHO05D007409 2.0e-59 233.0 158 64.6
Ca_17588_v3 Cicer arietinum L. HOM05D006254 ORTHO05D007409 2.0e-59 233.0 157 68.8
EL10Ac4g08984 Beta vulgaris HOM05D006254 ORTHO05D007409 2.6e-59 232.6 160 63.8
PSO017G1045 Papaver somniferum HOM05D006254 ORTHO05D007409 2.6e-59 232.6 158 65.2
Aqoxy5G02669 Aquilegia oxysepala HOM05D006254 ORTHO05D007409 3.4e-59 232.3 160 63.8
BcaB02g09339 Brassica carinata HOM05D006254 ORTHO05D007409 3.4e-59 232.3 158 63.3
MD11G1078600 Malus domestica HOM05D006254 ORTHO05D007409 4.5e-59 231.9 319 44.5
BcaB02g09340 Brassica carinata HOM05D006254 ORTHO05D007409 5.9e-59 231.5 158 62.7
HanXRQChr01g0017751 Helianthus annuus HOM05D006254 ORTHO05D007409 5.9e-59 231.5 156 64.7
Oeu011007.1 Olea europaea HOM05D006254 ORTHO05D007409 7.6e-59 231.1 159 63.5
PGR119G0951 Punica granatum HOM05D006254 ORTHO05D007409 1.7e-58 229.9 166 59.6
A05p09180 Brassica napus HOM05D006254 ORTHO05D007409 2.9e-58 229.2 159 62.9
BraA05t19873Z Brassica rapa HOM05D006254 ORTHO05D007409 2.9e-58 229.2 159 62.9
Lalb_Chr12g0202731 Lupinus albus HOM05D006254 ORTHO05D007409 2.9e-58 229.2 157 66.2
BolC4t22794H Brassica oleracea HOM05D006254 ORTHO05D007409 3.8e-58 228.8 158 62.7
VMungo0251G0787 Vigna mungo HOM05D006254 ORTHO05D007409 5.0e-58 228.4 157 65.6
Lsat_1_v5_gn_1_78401 Lactuca sativa HOM05D006254 ORTHO05D007409 7.2e-57 224.6 163 60.7
Lj4g0026953 Lotus japonicus HOM05D006254 ORTHO05D007409 7.2e-57 224.6 160 66.2
Aa31LG5G9250 Aethionema arabicum HOM05D006254 ORTHO05D007409 9.3e-57 224.2 156 64.1
CARHR037200 Cardamine hirsuta HOM05D006254 ORTHO05D007409 9.3e-57 224.2 158 62.7
BcaC02g11789 Brassica carinata HOM05D006254 ORTHO05D007409 1.6e-56 223.4 159 61.6
C04p11350 Brassica napus HOM05D006254 ORTHO05D007409 1.6e-56 223.4 159 61.6
BolC4t22773H Brassica oleracea HOM05D006254 ORTHO05D007409 1.6e-56 223.4 159 61.6
Gohir.D04G040400 Gossypium hirsutum HOM05D006254 ORTHO05D007409 1.0e-55 220.7 156 64.7
arahy.Tifrunner.gnm1.ann1.ZNEY68 Arachis hypogaea HOM05D006254 ORTHO05D007409 2.3e-55 219.5 156 63.5
Nitab4.5_0000004g0230 Nicotiana tabacum HOM05D006254 ORTHO05D007409 2.3e-55 219.5 157 62.4
arahy.Tifrunner.gnm1.ann1.9169VS Arachis hypogaea HOM05D006254 ORTHO05D007409 3.0e-55 219.2 156 63.5
Sc20g0000720 Simmondsia chinensis HOM05D006254 ORTHO05D007409 3.0e-55 219.2 174 58.0
Ah.04g163200 Amaranthus hybridus HOM05D006254 ORTHO05D007409 2.5e-54 216.1 157 58.6
Rhsim09G0131600 Rhododendron simsii HOM05D006254 ORTHO05D007409 3.3e-54 215.7 160 61.2
RcHm_v2.0_Chr5g0068971 Rosa chinensis HOM05D006254 ORTHO05D007409 1.3e-53 213.8 156 65.4
Migut.H00776 Erythranthe guttata HOM05D006254 ORTHO05D007409 2.2e-53 213.0 172 54.1
unitig_65.g29879 Utricularia gibba HOM05D006254 ORTHO05D007409 2.2e-53 213.0 156 60.3
Os11g0175500 Oryza sativa ssp. japonica HOM05D006254 ORTHO05D007409 5.0e-50 201.8 176 51.1
Nitab4.5_0012738g0010 Nicotiana tabacum HOM05D006254 ORTHO05D007409 1.9e-49 199.9 160 57.5
Hund06901 Selenicereus undatus HOM05D006254 ORTHO05D007409 7.9e-48 194.5 156 58.3
Zm00001eb200940 Zea mays HOM05D006254 ORTHO05D007409 7.9e-48 194.5 164 51.8
FAN16G1494 Fragaria x ananassa HOM05D006254 ORTHO05D007409 1.0e-47 194.1 129 70.5
unitig_62.g23450 Utricularia gibba HOM05D006254 ORTHO05D007409 1.7e-45 186.8 198 47.5
DCAR_009615 Daucus carota HOM05D006254 ORTHO05D007409 7.7e-43 177.9 116 69.8
HPP92_016136 Vanilla planifolia HOM05D006254 ORTHO05D007409 2.5e-41 172.9 148 50.7
AUR62036036 Chenopodium quinoa HOM05D006254 ORTHO05D007409 1.6e-40 170.2 145 53.1
Migut.H00777 Erythranthe guttata HOM05D006254 ORTHO05D007409 6.7e-39 164.9 172 46.5
Phvul.002G279100 Phaseolus vulgaris HOM05D006254 ORTHO05D007409 6.3e-37 158.3 116 62.9
RcHm_v2.0_Chr2g0157061 Rosa chinensis HOM05D006254 ORTHO05D007409 5.9e-35 151.8 92 75.0
MD11G1077800 Malus domestica HOM05D006254 ORTHO05D007409 1.7e-34 150.2 68 95.6
Duzib264G1273 Durio zibethinus HOM05D006254 ORTHO05D007409 4.2e-33 145.6 82 76.8
Sabra04G0089300 Salix brachista HOM05D006254 ORTHO05D007409 1.6e-32 143.7 111 59.5
Thecc.01G235200 Theobroma cacao HOM05D006254 ORTHO05D007409 2.0e-30 136.7 94 67.0
Glyma.05G198100 Glycine max HOM05D006254 ORTHO05D007409 6.1e-24 115.2 91 59.3
MD11G1077300 Malus domestica HOM05D006254 ORTHO05D007409 1.4e-23 114.0 83 71.1
CDE06G2483 Ceratophyllum demersum HOM05D006254 ORTHO05D007409 2.6e-22 109.8 94 51.1
Ciclev10024761m.g Citrus clementina HOM05D003183 ORTHO05D003697 4.8e-21 105.5 74 66.2
AagrBONN_evm.TU.Sc2ySwM_117.2849 Anthoceros agrestis HOM05D006254 ORTHO05D007409 1.1e-20 104.4 176 32.4
Mapoly0003s0196 Marchantia polymorpha HOM05D006254 ORTHO05D007409 1.8e-20 103.6 174 33.9
Sed0010974 Sechium edule HOM05D006254 ORTHO05D007409 1.2e-19 100.9 74 62.2
Nn1g08418 Nelumbo nucifera HOM05D006254 ORTHO05D007409 1.0e-18 97.8 75 60.0
RcHm_v2.0_Chr2g0157071 Rosa chinensis HOM05D006254 ORTHO05D007409 2.9e-18 96.3 57 73.7
AUR62004819 Chenopodium quinoa HOM05D006254 ORTHO05D007409 1.5e-17 94.0 83 50.6
Haze_25432 Corylus avellana HOM05D006254 ORTHO05D007409 3.6e-16 89.4 206 30.1
Haze_25431 Corylus avellana HOM05D006254 ORTHO05D007409 8.0e-16 88.2 206 30.1
CBR_g38543 Chara braunii HOM05D006254 ORTHO05D007409 1.7e-13 80.5 177 30.5
ATR0584G026 Amborella trichopoda HOM05D006254 ORTHO05D007409 1.1e-12 77.8 93 41.9
Actinidia38918 Actinidia chinensis HOM05D006254 ORTHO05D007409 5.9e-11 72.0 42 73.8
arahy.Tifrunner.gnm1.ann1.SX6F5A Arachis hypogaea HOM05D006254 ORTHO05D007409 5.0e-10 68.9 86 43.0
BolC4t22791H Brassica oleracea HOM05D006254 ORTHO05D007409 1.9e-09 67.0 54 53.7
MD11G1077500 Malus domestica HOM05D006254 ORTHO05D007409 2.3e-07 60.1 39 69.2
AagrBONN_evm.TU.Sc2ySwM_228.4097 Anthoceros agrestis HOM05D006254 ORTHO05D007409 7.5e-06 55.1 134 27.6


User provided reference genes

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