Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD00G1033800 Malus domestica HOM05D004776 ORTHO05D005777 3.9e-44 181.0 88 100.0
MD11G1145200 Malus domestica HOM05D004776 ORTHO05D005777 8.2e-26 120.2 132 53.0
CiPaw.13G118600 Carya illinoinensis HOM05D004776 ORTHO05D005777 2.0e-24 115.5 132 50.8
Haze_23751 Corylus avellana HOM05D004776 ORTHO05D005777 2.0e-24 115.5 132 50.8
Manes.04G015500 Manihot esculenta HOM05D004776 ORTHO05D005777 2.6e-24 115.2 132 51.5
Potri.009G007900 Populus trichocarpa HOM05D004776 ORTHO05D005777 2.6e-24 115.2 132 50.8
Prupe.6G108100 Prunus persica HOM05D004776 ORTHO05D005777 3.4e-24 114.8 132 51.5
GSVIVG01031509001 Vitis vinifera HOM05D004776 ORTHO05D005777 4.5e-24 114.4 129 51.9
ECA248G3913 Erigeron canadensis HOM05D004776 ORTHO05D005777 5.8e-24 114.0 129 51.2
HanXRQChr11g0346181 Helianthus annuus HOM05D004776 ORTHO05D005777 7.6e-24 113.6 132 50.0
Lj3g0025221 Lotus japonicus HOM05D004776 ORTHO05D005777 7.6e-24 113.6 132 50.8
vmacro14409 Vaccinium macrocarpon HOM05D004776 ORTHO05D005777 7.6e-24 113.6 132 50.8
TWI79G1687 Tripterygium wilfordii HOM05D004776 ORTHO05D005777 1.0e-23 113.2 132 49.2
Actinidia20436 Actinidia chinensis HOM05D004776 ORTHO05D005777 1.3e-23 112.8 132 49.2
RcHm_v2.0_Chr2g0122071 Rosa chinensis HOM05D004776 ORTHO05D005777 1.3e-23 112.8 132 50.0
Hma1.2p1_0569F.1_g180290 Hydrangea macrophylla HOM05D004776 ORTHO05D005777 1.7e-23 112.5 132 49.2
Phvul.005G131900 Phaseolus vulgaris HOM05D004776 ORTHO05D005777 1.7e-23 112.5 132 50.0
VMungo1080G0818 Vigna mungo HOM05D004776 ORTHO05D006187 1.7e-23 112.5 132 50.0
arahy.Tifrunner.gnm1.ann1.UZ8W9W Arachis hypogaea HOM05D004776 ORTHO05D005777 2.2e-23 112.1 129 50.4
CSS0005795 Camellia sinensis var. sinensis HOM05D004776 ORTHO05D005777 2.2e-23 112.1 132 49.2
CSS0042525 Camellia sinensis var. sinensis HOM05D004776 ORTHO05D005777 2.2e-23 112.1 132 49.2
FAN27G1933 Fragaria x ananassa HOM05D004776 ORTHO05D005777 2.2e-23 112.1 132 50.0
Medtr2g095420 Medicago truncatula HOM05D004776 ORTHO05D005777 2.2e-23 112.1 132 50.0
PGR094G0002 Punica granatum HOM05D004776 ORTHO05D005777 2.2e-23 112.1 132 48.5
PGR094G0004 Punica granatum HOM05D004776 ORTHO05D005777 2.2e-23 112.1 132 48.5
PGR102G1642 Punica granatum HOM05D004776 ORTHO05D005777 2.2e-23 112.1 132 48.5
arahy.Tifrunner.gnm1.ann1.K18VCE Arachis hypogaea HOM05D004776 ORTHO05D005777 2.9e-23 111.7 129 50.4
arahy.Tifrunner.gnm1.ann1.MGN1WG Arachis hypogaea HOM05D004776 ORTHO05D005777 2.9e-23 111.7 129 50.4
Atru.chr3.3552 Acer truncatum HOM05D004776 ORTHO05D005777 3.8e-23 111.3 132 49.2
CANSAT54G2950 Cannabis sativa HOM05D004776 ORTHO05D005777 3.8e-23 111.3 132 49.2
DCAR_006106 Daucus carota HOM05D004776 ORTHO05D005777 3.8e-23 111.3 132 48.5
Lsat_1_v5_gn_1_63021 Lactuca sativa HOM05D004776 ORTHO05D005777 3.8e-23 111.3 96 64.6
QL01p015865 Quercus lobata HOM05D004776 ORTHO05D005777 3.8e-23 111.3 131 48.9
TWI31G0757 Tripterygium wilfordii HOM05D004776 ORTHO05D005777 3.8e-23 111.3 129 50.4
MBI18_g10191_MAGBIO Magnolia biondii HOM05D004776 ORTHO05D005777 4.9e-23 110.9 132 48.5
MBI18_g43296_MAGBIO Magnolia biondii HOM05D004776 ORTHO05D005777 4.9e-23 110.9 132 48.5
FvH4_1g24650 Fragaria vesca HOM05D004776 ORTHO05D005777 6.5e-23 110.5 132 48.5
FAN19G0403 Fragaria x ananassa HOM05D004776 ORTHO05D005777 6.5e-23 110.5 132 48.5
FAN26G3463 Fragaria x ananassa HOM05D004776 ORTHO05D005777 6.5e-23 110.5 132 48.5
FAN28G2552 Fragaria x ananassa HOM05D004776 ORTHO05D005777 6.5e-23 110.5 132 48.5
Manes.11G150502 Manihot esculenta HOM05D004776 ORTHO05D005777 6.5e-23 110.5 123 51.2
ClCG03G002670 Citrullus lanatus HOM05D004776 ORTHO05D005777 8.4e-23 110.2 132 48.5
CsaV3_1G013400 Cucumis sativus L. HOM05D004776 ORTHO05D005777 8.4e-23 110.2 132 48.5
FAN23G0844 Fragaria x ananassa HOM05D004776 ORTHO05D005777 8.4e-23 110.2 132 48.5
Gohir.A13G232250 Gossypium hirsutum HOM05D004776 ORTHO05D005777 1.1e-22 109.8 124 50.8
Lalb_Chr03g0027621 Lupinus albus HOM05D004776 ORTHO05D005777 1.1e-22 109.8 129 49.6
Actinidia03704 Actinidia chinensis HOM05D004776 ORTHO05D005777 1.4e-22 109.4 132 47.7
Actinidia14011 Actinidia chinensis HOM05D004776 ORTHO05D005777 1.4e-22 109.4 132 47.7
CAN.G1755.5 Capsicum annuum HOM05D004776 ORTHO05D005777 1.4e-22 109.4 127 49.6
CDE06G1539 Ceratophyllum demersum HOM05D004776 ORTHO05D005777 1.4e-22 109.4 136 47.8
Cc01_g10560 Coffea canephora HOM05D004776 ORTHO05D005777 1.4e-22 109.4 132 47.7
Duzib170G0082 Durio zibethinus HOM05D004776 ORTHO05D005777 1.4e-22 109.4 132 47.7
Gohir.D13G237900 Gossypium hirsutum HOM05D004776 ORTHO05D005777 1.4e-22 109.4 132 48.5
Gorai.013G268700 Gossypium raimondii HOM05D004776 ORTHO05D005777 1.4e-22 109.4 132 48.5
Glyma.13G323400 Glycine max HOM05D004776 ORTHO05D005777 1.9e-22 109.0 132 48.5
SGA_v2.0_scaffold116G32209 Striga asiatica HOM05D004776 ORTHO05D005777 1.9e-22 109.0 132 47.7
Thecc.09G348100 Theobroma cacao HOM05D004776 ORTHO05D005777 1.9e-22 109.0 132 47.0
AUR62014926 Chenopodium quinoa HOM05D004776 ORTHO05D005777 2.5e-22 108.6 130 49.2
AUR62029209 Chenopodium quinoa HOM05D004776 ORTHO05D005777 2.5e-22 108.6 130 49.2
Eucgr.B02538 Eucalyptus grandis HOM05D004776 ORTHO05D005777 2.5e-22 108.6 132 47.7
Gohir.1Z049525 Gossypium hirsutum HOM05D004776 ORTHO05D005777 2.5e-22 108.6 127 49.6
SalBow3G4083 Salvia bowleyana HOM05D004776 ORTHO05D005777 2.5e-22 108.6 129 47.3
Solyc06g074960.4 Solanum lycopersicum HOM05D004776 ORTHO05D005777 2.5e-22 108.6 127 48.8
Sopen06g031360 Solanum pennellii HOM05D004776 ORTHO05D005777 2.5e-22 108.6 127 48.8
PGSC0003DMG400007163 Solanum tuberosum HOM05D004776 ORTHO05D005777 2.5e-22 108.6 127 48.8
Aqoxy2G01783 Aquilegia oxysepala HOM05D004776 ORTHO05D005777 3.2e-22 108.2 132 47.0
EL10Ac9g22573 Beta vulgaris HOM05D004776 ORTHO05D005777 3.2e-22 108.2 130 48.5
Sabra09G0004700 Salix brachista HOM05D004776 ORTHO05D005777 3.2e-22 108.2 143 46.2
arahy.Tifrunner.gnm1.ann1.69IQEU Arachis hypogaea HOM05D004776 ORTHO05D005777 4.2e-22 107.8 127 49.6
Oeu018486.2 Olea europaea HOM05D004776 ORTHO05D005777 4.2e-22 107.8 132 47.0
Psat0s3241g0040 Pisum sativum HOM05D004776 ORTHO05D005777 4.2e-22 107.8 132 48.5
Sed0027733 Sechium edule HOM05D004776 ORTHO05D005777 5.5e-22 107.5 132 47.7
TPR.G11629 Trifolium pratense HOM05D004776 ORTHO05D005777 5.5e-22 107.5 132 48.5
COL.COLO4_34701 Corchorus olitorius HOM05D004776 ORTHO05D005777 7.1e-22 107.1 132 46.2
BcaC09g49697 Brassica carinata HOM05D004776 ORTHO05D005777 9.3e-22 106.7 132 48.5
A01p26580 Brassica napus HOM05D004776 ORTHO05D005777 9.3e-22 106.7 132 48.5
C01p33820 Brassica napus HOM05D004776 ORTHO05D005777 9.3e-22 106.7 132 48.5
BolC1t03347H Brassica oleracea HOM05D004776 ORTHO05D005777 9.3e-22 106.7 132 48.5
BraA01t02588Z Brassica rapa HOM05D004776 ORTHO05D005777 9.3e-22 106.7 132 48.5
Gorai.003G144600 Gossypium raimondii HOM05D004776 ORTHO05D005777 9.3e-22 106.7 132 46.2
THA.LOC104799516 Tarenaya hassleriana HOM05D004776 ORTHO05D005777 9.3e-22 106.7 136 47.1
Ciclev10028099m.g Citrus clementina HOM05D004776 ORTHO05D005777 1.2e-21 106.3 132 47.7
MSTRG.17776 Avicennia marina HOM05D004776 ORTHO05D005777 1.6e-21 105.9 132 47.0
CARHR150930 Cardamine hirsuta HOM05D004776 ORTHO05D005777 1.6e-21 105.9 129 48.8
Nn2g11574 Nelumbo nucifera HOM05D004776 ORTHO05D005777 1.6e-21 105.9 132 47.0
AL5G23500 Arabidopsis lyrata HOM05D004776 ORTHO05D005777 2.1e-21 105.5 124 49.2
BcaB05g23422 Brassica carinata HOM05D004776 ORTHO05D005777 2.1e-21 105.5 132 47.7
AL5G23530 Arabidopsis lyrata HOM05D004776 ORTHO05D005777 3.5e-21 104.8 129 48.1
AT3G45040 Arabidopsis thaliana HOM05D004776 ORTHO05D005777 3.5e-21 104.8 129 48.1
Carub.0005s1082 Capsella rubella HOM05D004776 ORTHO05D005777 3.5e-21 104.8 129 48.1
Duzib168G1494 Durio zibethinus HOM05D004776 ORTHO05D005777 3.5e-21 104.8 132 45.5
Sp5g16230 Schrenkiella parvula HOM05D004776 ORTHO05D005777 3.5e-21 104.8 129 48.1
Cpa.g.sc1.25 Carica papaya HOM05D004776 ORTHO05D005777 4.6e-21 104.4 139 47.5
Gohir.D03G137500 Gossypium hirsutum HOM05D004776 ORTHO05D005777 6.1e-21 104.0 132 45.5
PSO339G3038 Papaver somniferum HOM05D004776 ORTHO05D005777 6.1e-21 104.0 132 45.5
PSO339G3219 Papaver somniferum HOM05D004776 ORTHO05D005777 6.1e-21 104.0 129 46.5
Aa31LG4G14110 Aethionema arabicum HOM05D004776 ORTHO05D005777 7.9e-21 103.6 132 46.2
BcaC02g11340 Brassica carinata HOM05D004776 ORTHO05D005777 7.9e-21 103.6 129 47.3
C04p17380 Brassica napus HOM05D004776 ORTHO05D005777 7.9e-21 103.6 129 47.3
BolC4t23289H Brassica oleracea HOM05D004776 ORTHO05D005777 7.9e-21 103.6 129 47.3
Sc05g0005060 Simmondsia chinensis HOM05D004776 ORTHO05D005777 7.9e-21 103.6 132 47.7
A05p13030 Brassica napus HOM05D004776 ORTHO05D005777 1.0e-20 103.2 132 46.2
BraA05t20243Z Brassica rapa HOM05D004776 ORTHO05D005777 1.0e-20 103.2 132 46.2
TAR623G0387 Trochodendron aralioides HOM05D004776 ORTHO05D005777 1.0e-20 103.2 132 46.2
PSO801G0074 Papaver somniferum HOM05D004776 ORTHO05D005777 1.3e-20 102.8 132 45.5
Rhsim01G0212300 Rhododendron simsii HOM05D004776 ORTHO05D005777 2.3e-20 102.1 161 41.0
Gohir.A03G030900 Gossypium hirsutum HOM05D004776 ORTHO05D005777 3.9e-20 101.3 132 44.7
ATR1132G031 Amborella trichopoda HOM05D004776 ORTHO05D005777 6.7e-20 100.5 132 44.7
PSO063G2354 Papaver somniferum HOM05D004776 ORTHO05D005777 1.5e-19 99.4 132 43.9
Nitab4.5_0006015g0020 Nicotiana tabacum HOM05D004776 ORTHO05D005777 1.8e-17 92.4 123 44.7
Peaxi162Scf01159g00227 Petunia axillaris HOM05D004776 ORTHO05D005777 1.8e-17 92.4 123 43.9
MD03G1126100 Malus domestica HOM05D004776 ORTHO05D005777 2.4e-17 92.0 103 55.3
Nitab4.5_0000106g0400 Nicotiana tabacum HOM05D004776 ORTHO05D005777 5.3e-17 90.9 127 42.5
Oeu029897.2 Olea europaea HOM05D004776 ORTHO05D005777 5.9e-16 87.4 186 33.9
Aqoxy3G00574 Aquilegia oxysepala HOM05D004776 ORTHO05D005777 2.9e-15 85.1 122 41.0
BcaNung05690 Brassica carinata HOM05D004776 ORTHO05D005777 6.5e-15 84.0 122 43.4
MELO3C035466.2 Cucumis melo HOM05D004776 ORTHO05D005777 6.5e-15 84.0 198 31.8
Mapoly0124s0030 Marchantia polymorpha HOM05D004776 ORTHO05D005777 6.1e-13 77.4 130 36.2
Cfa010344 Carpinus fangiana HOM05D004776 ORTHO05D005777 1.1e-11 73.2 43 76.7
Ca_01388_v3 Cicer arietinum L. HOM05D004776 ORTHO05D006187 1.1e-11 73.2 40 82.5
Glyma.12G177300 Glycine max HOM05D004776 ORTHO05D005777 3.3e-11 71.6 43 74.4
Dinv29356 Davidia involucrata HOM05D004776 ORTHO05D006187 4.3e-11 71.2 40 77.5
Lj1A206T59 Lonicera japonica HOM05D004776 ORTHO05D005777 4.3e-11 71.2 43 74.4
FAN05G3839 Fragaria x ananassa HOM05D004776 ORTHO05D005777 1.3e-10 69.7 74 52.7
Pp3c13_8200 Physcomitrium patens HOM05D004776 ORTHO05D005777 1.3e-10 69.7 131 35.1
unitig_8.g3670 Utricularia gibba HOM05D004776 ORTHO05D005777 1.3e-10 69.7 43 72.1
Thhalv10002461m.g Eutrema salsugineum HOM05D004776 ORTHO05D005777 2.2e-10 68.9 43 72.1
Zm00001eb232190 Zea mays HOM05D004776 ORTHO05D005777 4.8e-10 67.8 43 74.4
Migut.N02573 Erythranthe guttata HOM05D004776 ORTHO05D005777 8.2e-10 67.0 53 60.4
SEGI_23621 Sequoiadendron giganteum HOM05D004776 ORTHO05D005777 1.1e-09 66.6 43 69.8
SEGI_33157 Sequoiadendron giganteum HOM05D004776 ORTHO05D005777 1.1e-09 66.6 43 69.8
HPP92_025805 Vanilla planifolia HOM05D004776 ORTHO05D005777 1.8e-09 65.9 43 72.1
FAN07G0780 Fragaria x ananassa HOM05D004776 ORTHO05D005777 2.5e-06 55.5 68 47.1


User provided reference genes

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