Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD00G1015500 Malus domestica HOM05D007381 ORTHO05D009496 2.5e-175 618.6 306 100.0
Prupe.6G222900 Prunus persica HOM05D007381 ORTHO05D009496 2.1e-169 599.0 306 96.7
MD15G1294900 Malus domestica HOM05D007381 ORTHO05D009496 1.0e-168 596.7 306 96.4
RcHm_v2.0_Chr2g0107591 Rosa chinensis HOM05D007381 ORTHO05D009496 2.7e-161 572.0 306 91.2
FvH4_1g17400 Fragaria vesca HOM05D007381 ORTHO05D009496 5.7e-159 564.3 306 90.2
FAN23G1987 Fragaria x ananassa HOM05D007381 ORTHO05D009496 4.8e-158 561.2 306 89.5
Sed0015462 Sechium edule HOM05D007381 ORTHO05D009496 2.4e-157 558.9 306 87.3
MELO3C007622.2 Cucumis melo HOM05D007381 ORTHO05D009496 4.1e-157 558.1 306 87.9
CsaV3_6G043990 Cucumis sativus L. HOM05D007381 ORTHO05D009496 2.2e-155 552.4 306 87.3
FAN19G2977 Fragaria x ananassa HOM05D007381 ORTHO05D009496 2.2e-155 552.4 322 85.4
Dinv30077 Davidia involucrata HOM05D007381 ORTHO05D009496 4.2e-154 548.1 307 86.3
Dinv26914 Davidia involucrata HOM05D007381 ORTHO05D009496 1.2e-153 546.6 307 86.3
GSVIVG01000134001 Vitis vinifera HOM05D007381 ORTHO05D009496 2.0e-151 539.3 307 86.3
TAR628G1049 Trochodendron aralioides HOM05D007381 ORTHO05D009496 3.3e-151 538.5 307 84.0
CANSAT01G2210 Cannabis sativa HOM05D007381 ORTHO05D009496 5.7e-151 537.7 306 85.6
PSO170G6067 Papaver somniferum HOM05D007381 ORTHO05D009496 1.3e-150 536.6 307 83.7
PGR102G2572 Punica granatum HOM05D007381 ORTHO05D009496 1.3e-150 536.6 307 84.7
Lj2g0010288 Lotus japonicus HOM05D007381 ORTHO05D009496 3.7e-150 535.0 306 84.3
VMungo1215G2498 Vigna mungo HOM05D007381 ORTHO05D009496 6.3e-150 534.3 306 83.3
Medtr5g015840 Medicago truncatula HOM05D007381 ORTHO05D009496 8.2e-150 533.9 306 84.6
Cpa.g.sc6.38 Carica papaya HOM05D007381 ORTHO05D009496 1.4e-149 533.1 307 84.0
Phvul.002G012100 Phaseolus vulgaris HOM05D007381 ORTHO05D009496 5.3e-149 531.2 306 83.3
COL.COLO4_11553 Corchorus olitorius HOM05D007381 ORTHO05D009496 1.6e-148 529.6 307 83.1
Eucgr.H02297 Eucalyptus grandis HOM05D007381 ORTHO05D009496 1.6e-148 529.6 307 83.1
Rhsim08G0094800 Rhododendron simsii HOM05D007381 ORTHO05D009496 1.6e-148 529.6 307 83.4
Ca_24708_v3 Cicer arietinum L. HOM05D007381 ORTHO05D009496 3.5e-148 528.5 306 83.0
Gohir.D10G098200 Gossypium hirsutum HOM05D007381 ORTHO05D009496 3.5e-148 528.5 307 82.4
Gorai.011G107900 Gossypium raimondii HOM05D007381 ORTHO05D009496 5.9e-148 527.7 307 82.4
arahy.Tifrunner.gnm1.ann1.S5EEEI Arachis hypogaea HOM05D007381 ORTHO05D009496 7.7e-148 527.3 306 82.7
Lalb_Chr05g0213621 Lupinus albus HOM05D007381 ORTHO05D009496 7.7e-148 527.3 306 83.3
arahy.Tifrunner.gnm1.ann1.I4PWFV Arachis hypogaea HOM05D007381 ORTHO05D009496 1.3e-147 526.6 306 82.4
Aqoxy5G00892 Aquilegia oxysepala HOM05D007381 ORTHO05D009496 1.7e-147 526.2 307 82.4
Thecc.01G070300 Theobroma cacao HOM05D007381 ORTHO05D009496 2.9e-147 525.4 307 82.7
Glyma.11G048900 Glycine max HOM05D007381 ORTHO05D009496 3.8e-147 525.0 306 83.0
CSS0029250 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 5.0e-147 524.6 307 83.1
TPR.G20964 Trifolium pratense HOM05D007381 ORTHO05D009496 6.5e-147 524.2 306 82.7
CSS0037700 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 8.5e-147 523.9 307 83.1
HanXRQChr12g0373171 Helianthus annuus HOM05D007381 ORTHO05D009496 8.5e-147 523.9 307 80.5
Nn1g04598 Nelumbo nucifera HOM05D007381 ORTHO05D009496 8.5e-147 523.9 307 81.8
Atru.chr3.157 Acer truncatum HOM05D007381 ORTHO05D009496 1.5e-146 523.1 307 82.1
Atru.chr3.186 Acer truncatum HOM05D007381 ORTHO05D009496 1.5e-146 523.1 307 82.1
Actinidia16435 Actinidia chinensis HOM05D007381 ORTHO05D009496 1.5e-146 523.1 307 83.7
Gohir.A10G089900 Gossypium hirsutum HOM05D007381 ORTHO05D009496 4.2e-146 521.5 307 81.4
Manes.12G110400 Manihot esculenta HOM05D007381 ORTHO05D009496 4.2e-146 521.5 306 80.7
Migut.H00360 Erythranthe guttata HOM05D007381 ORTHO05D009496 7.2e-146 520.8 307 80.8
Glyma.01G192900 Glycine max HOM05D007381 ORTHO05D009496 7.2e-146 520.8 306 81.7
Lalb_Chr16g0378811 Lupinus albus HOM05D007381 ORTHO05D009496 2.7e-145 518.8 306 81.7
Peaxi162Scf00264g00118 Petunia axillaris HOM05D007381 ORTHO05D009496 4.7e-145 518.1 307 79.8
Cc07_g06930 Coffea canephora HOM05D007381 ORTHO05D009496 1.0e-144 516.9 307 79.8
ClCG01G017450 Citrullus lanatus HOM05D007381 ORTHO05D009496 2.3e-144 515.8 390 68.5
EL10Ac6g15638 Beta vulgaris HOM05D007381 ORTHO05D009496 6.7e-144 514.2 307 78.8
Lsat_1_v5_gn_4_160940 Lactuca sativa HOM05D007381 ORTHO05D009496 1.2e-143 513.5 307 79.2
ECA232G2614 Erigeron canadensis HOM05D007381 ORTHO05D009496 2.0e-143 512.7 304 80.6
Potri.007G053900 Populus trichocarpa HOM05D007381 ORTHO05D009496 4.4e-143 511.5 307 80.5
PGSC0003DMG400024934 Solanum tuberosum HOM05D007381 ORTHO05D009496 6.3e-142 507.7 307 77.9
Sopen02g037070 Solanum pennellii HOM05D007381 ORTHO05D009496 8.2e-142 507.3 307 77.9
THA.LOC104819874 Tarenaya hassleriana HOM05D007381 ORTHO05D009496 3.1e-141 505.4 307 78.2
Ciclev10025991m.g Citrus clementina HOM05D007381 ORTHO05D009496 4.1e-141 505.0 288 84.0
Solyc02g092510.3 Solanum lycopersicum HOM05D007381 ORTHO05D009496 5.9e-140 501.1 307 76.9
CAN.G1075.23 Capsicum annuum HOM05D007381 ORTHO05D009496 3.8e-139 498.4 307 76.5
FAN28G2520 Fragaria x ananassa HOM05D007381 ORTHO05D009496 3.8e-139 498.4 276 88.0
Lj4A160G63 Lonicera japonica HOM05D007381 ORTHO05D009496 3.8e-139 498.4 358 70.7
Aa31LG6G14440 Aethionema arabicum HOM05D007381 ORTHO05D009496 1.9e-138 496.1 307 76.2
FAN26G1164 Fragaria x ananassa HOM05D007381 ORTHO05D009496 2.5e-138 495.7 275 88.0
vmacro17999 Vaccinium macrocarpon HOM05D007381 ORTHO05D009496 1.8e-136 489.6 370 67.8
Cfa004113 Carpinus fangiana HOM05D007381 ORTHO05D009496 8.8e-136 487.3 305 80.3
Oeu040581.2 Olea europaea HOM05D007381 ORTHO05D009496 1.5e-135 486.5 371 65.5
CDE07G0114 Ceratophyllum demersum HOM05D007381 ORTHO05D009496 2.6e-135 485.7 307 74.9
ATR0019G019 Amborella trichopoda HOM05D007381 ORTHO05D009496 3.7e-134 481.9 307 74.6
SEGI_03968 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 3.7e-134 481.9 306 74.5
Haze_15300 Corylus avellana HOM05D007381 ORTHO05D009496 7.0e-133 477.6 292 81.8
Zm00001eb108230 Zea mays HOM05D007381 ORTHO05D009496 3.5e-132 475.3 306 73.5
Os07g0588800 Oryza sativa ssp. japonica HOM05D007381 ORTHO05D009496 1.3e-131 473.4 307 73.0
unitig_899.g14582 Utricularia gibba HOM05D007381 ORTHO05D009496 2.9e-131 472.2 307 73.0
TWI73G0080 Tripterygium wilfordii HOM05D007381 ORTHO05D009496 4.5e-124 448.4 307 73.0
DCAR_021466 Daucus carota HOM05D007381 ORTHO05D009496 1.0e-123 447.2 307 71.7
SGA_v2.0_scaffold15G07431 Striga asiatica HOM05D007381 ORTHO05D009496 8.6e-123 444.1 277 75.8
Sabra07G0047100 Salix brachista HOM05D007381 ORTHO05D009496 3.6e-121 438.7 293 74.4
Nitab4.5_0000651g0120 Nicotiana tabacum HOM05D007381 ORTHO05D009496 5.2e-120 434.9 278 74.8
Nitab4.5_0006069g0020 Nicotiana tabacum HOM05D007381 ORTHO05D009496 1.1e-117 427.2 277 73.6
CiPaw.01G006100 Carya illinoinensis HOM05D007381 ORTHO05D009496 2.4e-117 426.0 243 84.0
Hma1.2p1_0730F.1_g209840 Hydrangea macrophylla HOM05D007381 ORTHO05D009496 3.3e-114 415.6 235 85.1
Pp3c18_1320 Physcomitrium patens HOM05D007381 ORTHO05D009496 2.3e-112 409.5 310 63.9
AagrBONN_evm.TU.Sc2ySwM_362.1621 Anthoceros agrestis HOM05D007381 ORTHO05D009496 2.6e-111 406.0 312 64.1
Duzib187G0033 Durio zibethinus HOM05D007381 ORTHO05D009496 3.0e-107 392.5 307 65.8
SMO268G0024 Selaginella moellendorffii HOM05D007381 ORTHO05D009496 4.9e-102 375.2 297 62.0
Mapoly0084s0082 Marchantia polymorpha HOM05D007381 ORTHO05D009496 8.3e-102 374.4 306 58.8
SEGI_30700 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 1.2e-100 370.5 236 75.0
Cre07.g344150 Chlamydomonas reinhardtii HOM05D007381 ORTHO05D009496 5.8e-79 298.5 315 49.2
Hund13939 Selenicereus undatus HOM05D007381 ORTHO05D009496 7.1e-77 291.6 243 62.1
HPP92_026572 Vanilla planifolia HOM05D007381 ORTHO05D009496 9.6e-74 281.2 190 68.9
QL06p039803 Quercus lobata HOM05D007381 ORTHO05D009496 3.8e-62 242.7 134 84.3
CSS0032842 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 2.2e-57 226.9 171 71.3
MCO12G353 Micromonas commoda HOM05D007381 ORTHO05D009496 8.2e-57 224.9 311 41.2
ATR0019G012 Amborella trichopoda HOM05D007381 ORTHO05D009496 2.4e-56 223.4 148 73.6
PRCOL_00002255 Prasinoderma coloniale HOM05D007381 ORTHO05D009496 5.9e-55 218.8 282 43.6
CBR_g40647 Chara braunii HOM05D007381 ORTHO05D009496 5.0e-54 215.7 565 28.7
Ca_17124_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 1.2e-23 114.8 88 70.5
SHI33146 Sapria himalayana HOM05D007381 ORTHO05D009496 2.2e-22 110.5 70 68.6
Cfa025505 Carpinus fangiana HOM05D007381 ORTHO05D009496 2.5e-21 107.1 290 29.7
CBR_g29716 Chara braunii HOM05D007381 ORTHO05D009496 2.3e-19 100.5 96 47.9
Ca_08895_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 6.8e-19 99.0 72 69.4
COL.COLO4_34115 Corchorus olitorius HOM05D007381 ORTHO05D159467 2.2e-09 67.4 39 82.1
Rhsim08G0136300 Rhododendron simsii HOM05D007381 ORTHO05D006450 1.1e-08 65.1 53 64.2


User provided reference genes

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