Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MD00G1008900 Malus domestica HOM05D009361 ORTHO05D011403 1.9e-25 118.2 55 100.0
MD10G1275200 Malus domestica HOM05D009361 ORTHO05D011403 2.8e-16 87.8 43 90.7
Atru.chr10.1567 Acer truncatum HOM05D009361 ORTHO05D011403 5.8e-14 80.1 43 81.4
Prupe.4G067200 Prunus persica HOM05D009361 ORTHO05D011403 6.5e-13 76.6 44 77.3
FvH4_3g27970 Fragaria vesca HOM05D009361 ORTHO05D011403 5.5e-12 73.6 43 72.1
FAN11G2660 Fragaria x ananassa HOM05D009361 ORTHO05D011403 5.5e-12 73.6 43 72.1
FAN16G1864 Fragaria x ananassa HOM05D009361 ORTHO05D011403 5.5e-12 73.6 43 72.1
FAN21G0947 Fragaria x ananassa HOM05D009361 ORTHO05D011403 5.5e-12 73.6 43 72.1
Dinv12750 Davidia involucrata HOM05D009361 ORTHO05D011403 1.2e-11 72.4 43 67.4
TAR626G0863 Trochodendron aralioides HOM05D009361 ORTHO05D011403 1.6e-11 72.0 43 67.4
FAN25G3676 Fragaria x ananassa HOM05D009361 ORTHO05D011403 2.1e-11 71.6 43 69.8
RcHm_v2.0_Chr5g0011761 Rosa chinensis HOM05D009361 ORTHO05D011403 7.9e-11 69.7 43 72.1
MBI06_g16697_MAGBIO Magnolia biondii HOM05D009361 ORTHO05D011403 1.0e-10 69.3 42 69.0
Ciclev10017841m.g Citrus clementina HOM05D009361 ORTHO05D011403 8.7e-10 66.2 43 62.8
COL.COLO4_31228 Corchorus olitorius HOM05D009361 ORTHO05D011403 1.1e-09 65.9 44 63.6
Thecc.06G165200 Theobroma cacao HOM05D009361 ORTHO05D011403 1.1e-09 65.9 44 61.4
Duzib192G0455 Durio zibethinus HOM05D009361 ORTHO05D011403 1.5e-09 65.5 44 63.6
CSS0034263 Camellia sinensis var. sinensis HOM05D009361 ORTHO05D011403 2.5e-09 64.7 43 60.5
Cc02_g15620 Coffea canephora HOM05D009361 ORTHO05D011403 2.5e-09 64.7 42 64.3
GSVIVG01021259001 Vitis vinifera HOM05D009361 ORTHO05D011403 7.4e-09 63.2 43 65.1
Actinidia16773 Actinidia chinensis HOM05D009361 ORTHO05D011403 8.2e-08 59.7 46 50.0
Potri.004G061400 Populus trichocarpa HOM05D009361 ORTHO05D011403 8.2e-08 59.7 43 58.1
Aqoxy1G01973 Aquilegia oxysepala HOM05D009361 ORTHO05D011403 6.9e-07 56.6 43 53.5
Gohir.A10G034600 Gossypium hirsutum HOM05D009361 ORTHO05D011403 5.9e-06 53.5 44 54.5
Gohir.D10G035300 Gossypium hirsutum HOM05D009361 ORTHO05D011403 5.9e-06 53.5 46 50.0
Gorai.011G037100 Gossypium raimondii HOM05D009361 ORTHO05D011403 5.9e-06 53.5 46 50.0


User provided reference genes

Program Settings