Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO16G596 Micromonas commoda HOM05D004501 ORTHO05D004944 0.0e+00 2020.4 1126 100.0
PRCOL_00000429 Prasinoderma coloniale HOM05D004501 ORTHO05D004944 2.9e-27 128.6 673 29.4
Cre16.g683437 Chlamydomonas reinhardtii HOM05D004501 ORTHO05D004944 7.2e-18 97.4 755 26.9
TWI15G0617 Tripterygium wilfordii HOM05D004501 ORTHO05D004944 1.2e-17 96.7 601 24.5
Sed0022861 Sechium edule HOM05D004501 ORTHO05D004944 1.6e-17 96.3 546 25.1
Haze_07939 Corylus avellana HOM05D004501 ORTHO05D004944 4.0e-16 91.7 548 24.5
Carub.0004s2192 Capsella rubella HOM05D004501 ORTHO05D004944 1.2e-15 90.1 581 24.1
Cfa012694 Carpinus fangiana HOM05D004501 ORTHO05D004944 1.2e-15 90.1 546 24.2
Aqoxy7G03746 Aquilegia oxysepala HOM05D004501 ORTHO05D004944 3.4e-15 88.6 592 23.1
FAN13G2915 Fragaria x ananassa HOM05D004501 ORTHO05D004944 4.4e-15 88.2 542 24.2
Potri.003G079700 Populus trichocarpa HOM05D004501 ORTHO05D004944 5.7e-15 87.8 444 24.1
Sabra01G0124800 Salix brachista HOM05D004501 ORTHO05D004944 5.7e-15 87.8 443 24.2
Prupe.5G064600 Prunus persica HOM05D004501 ORTHO05D004944 7.5e-15 87.4 545 24.4
CDE11G0214 Ceratophyllum demersum HOM05D004501 ORTHO05D004944 1.7e-14 86.3 539 24.9
FAN08G1352 Fragaria x ananassa HOM05D004501 ORTHO05D004944 1.7e-14 86.3 542 23.8
Zm00001eb215300 Zea mays HOM05D004501 ORTHO05D004944 1.7e-14 86.3 551 24.1
Thhalv10016197m.g Eutrema salsugineum HOM05D004501 ORTHO05D004944 2.2e-14 85.9 625 25.0
Medtr5g012940 Medicago truncatula HOM05D004501 ORTHO05D004944 2.2e-14 85.9 547 24.5
Psat2g176440 Pisum sativum HOM05D004501 ORTHO05D004944 6.3e-14 84.3 443 24.8
CiPaw.12G049700 Carya illinoinensis HOM05D004501 ORTHO05D004944 1.1e-13 83.6 544 23.5
Eucgr.E00402 Eucalyptus grandis HOM05D004501 ORTHO05D004944 1.1e-13 83.6 633 24.6
ATR1145G029 Amborella trichopoda HOM05D004501 ORTHO05D004944 1.4e-13 83.2 553 25.0
CARHR134700 Cardamine hirsuta HOM05D004501 ORTHO05D004944 1.4e-13 83.2 625 23.7
Nn1g00910 Nelumbo nucifera HOM05D004501 ORTHO05D004944 1.4e-13 83.2 550 23.5
Zm00001eb056470 Zea mays HOM05D004501 ORTHO05D004944 1.4e-13 83.2 549 25.0
MD04G1060900 Malus domestica HOM05D004501 ORTHO05D004944 2.4e-13 82.4 548 24.5
Migut.A01144 Erythranthe guttata HOM05D004501 ORTHO05D004944 3.2e-13 82.0 538 24.3
Oeu027013.1 Olea europaea HOM05D004501 ORTHO05D004944 3.2e-13 82.0 548 24.5
vmacro14139 Vaccinium macrocarpon HOM05D004501 ORTHO05D004944 3.2e-13 82.0 628 25.5
CsaV3_5G004460 Cucumis sativus L. HOM05D004501 ORTHO05D004944 4.1e-13 81.6 547 24.7
FvH4_5g19540 Fragaria vesca HOM05D004501 ORTHO05D004944 4.1e-13 81.6 542 23.6
Cc08_g12070 Coffea canephora HOM05D004501 ORTHO05D004944 5.4e-13 81.3 555 24.1
Phvul.002G056400 Phaseolus vulgaris HOM05D004501 ORTHO05D004944 5.4e-13 81.3 543 23.9
Lalb_Chr16g0379471 Lupinus albus HOM05D004501 ORTHO05D004944 1.6e-12 79.7 547 24.5
Sabra03G0049600 Salix brachista HOM05D004501 ORTHO05D004944 2.0e-12 79.3 546 23.3
Sp4g22100 Schrenkiella parvula HOM05D004501 ORTHO05D004944 2.0e-12 79.3 574 23.3
Aa31LG5G19800 Aethionema arabicum HOM05D004501 ORTHO05D004944 3.5e-12 78.6 577 23.4
VMungo1215G1578 Vigna mungo HOM05D004501 ORTHO05D004944 3.5e-12 78.6 540 23.1
Lj2g0006235 Lotus japonicus HOM05D004501 ORTHO05D004944 4.5e-12 78.2 565 24.2
Potri.001G155200 Populus trichocarpa HOM05D004501 ORTHO05D004944 4.5e-12 78.2 546 23.3
SEGI_38311 Sequoiadendron giganteum HOM05D004501 ORTHO05D004944 4.5e-12 78.2 565 24.6
arahy.Tifrunner.gnm1.ann1.0753T9 Arachis hypogaea HOM05D004501 ORTHO05D004944 5.9e-12 77.8 536 24.4
arahy.Tifrunner.gnm1.ann1.F6SWGC Arachis hypogaea HOM05D004501 ORTHO05D004944 5.9e-12 77.8 536 24.4
MSTRG.12127 Avicennia marina HOM05D004501 ORTHO05D004944 5.9e-12 77.8 540 23.1
CANSAT21G1630 Cannabis sativa HOM05D004501 ORTHO05D004944 5.9e-12 77.8 544 24.4
Glyma.11G035800 Glycine max HOM05D004501 ORTHO05D004944 5.9e-12 77.8 550 24.5
PSO732G0005 Papaver somniferum HOM05D004501 ORTHO05D004944 5.9e-12 77.8 543 22.3
Dinv21665 Davidia involucrata HOM05D004501 ORTHO05D004944 1.0e-11 77.0 544 24.1
QL12p011237 Quercus lobata HOM05D004501 ORTHO05D004944 1.0e-11 77.0 585 23.1
AT2G39810 Arabidopsis thaliana HOM05D004501 ORTHO05D004944 1.3e-11 76.6 617 23.7
Manes.01G084200 Manihot esculenta HOM05D004501 ORTHO05D004944 1.3e-11 76.6 579 23.1
Ca_24594_v3 Cicer arietinum L. HOM05D004501 ORTHO05D004944 1.7e-11 76.3 552 24.5
AL4G37360 Arabidopsis lyrata HOM05D004501 ORTHO05D004944 2.3e-11 75.9 620 23.1
Gohir.A03G006500 Gossypium hirsutum HOM05D004501 ORTHO05D004944 2.3e-11 75.9 540 22.8
Sed0003847 Sechium edule HOM05D004501 ORTHO05D004944 2.3e-11 75.9 620 24.2
GSVIVG01005813001 Vitis vinifera HOM05D004501 ORTHO05D004944 2.9e-11 75.5 533 25.1
Lalb_Chr09g0324311 Lupinus albus HOM05D004501 ORTHO05D004944 3.9e-11 75.1 546 23.6
Glyma.01G207400 Glycine max HOM05D004501 ORTHO05D004944 6.6e-11 74.3 547 23.4
Gorai.008G233400 Gossypium raimondii HOM05D004501 ORTHO05D004944 1.5e-10 73.2 543 23.8
CiPaw.11G082400 Carya illinoinensis HOM05D004501 ORTHO05D004944 2.5e-10 72.4 585 23.4
ClCG01G004260 Citrullus lanatus HOM05D004501 ORTHO05D004944 2.5e-10 72.4 549 23.5
Gohir.A12G215200 Gossypium hirsutum HOM05D004501 ORTHO05D004944 2.5e-10 72.4 542 23.6
HanXRQChr13g0417701 Helianthus annuus HOM05D004501 ORTHO05D004944 3.3e-10 72.0 541 23.3
RcHm_v2.0_Chr7g0204151 Rosa chinensis HOM05D004501 ORTHO05D004944 3.3e-10 72.0 577 22.9
CAN.G1178.8 Capsicum annuum HOM05D004501 ORTHO05D004944 4.3e-10 71.6 545 24.4
SGA_v2.0_scaffold104G30193 Striga asiatica HOM05D004501 ORTHO05D004944 4.3e-10 71.6 541 23.1
Gohir.D12G217800 Gossypium hirsutum HOM05D004501 ORTHO05D004944 5.6e-10 71.2 542 23.8
HanXRQChr03g0088961 Helianthus annuus HOM05D004501 ORTHO05D004944 9.5e-10 70.5 535 24.3
PGR042G0255 Punica granatum HOM05D004501 ORTHO05D004944 1.2e-09 70.1 621 22.9
PGSC0003DMG400026239 Solanum tuberosum HOM05D004501 ORTHO05D004944 1.2e-09 70.1 546 23.3
Sopen08g026820 Solanum pennellii HOM05D004501 ORTHO05D004944 1.6e-09 69.7 546 23.1
Gorai.003G175400 Gossypium raimondii HOM05D004501 ORTHO05D004944 2.1e-09 69.3 538 22.1
PSO675G3024 Papaver somniferum HOM05D004501 ORTHO05D004944 2.8e-09 68.9 548 21.9
Solyc08g078320.3 Solanum lycopersicum HOM05D004501 ORTHO05D004944 2.8e-09 68.9 546 23.1
Rhsim13G0032200 Rhododendron simsii HOM05D004501 ORTHO05D004944 4.7e-09 68.2 503 25.0
SalBow6G6502 Salvia bowleyana HOM05D004501 ORTHO05D004944 6.1e-09 67.8 574 22.8
Gohir.D03G165700 Gossypium hirsutum HOM05D004501 ORTHO05D004944 1.0e-08 67.0 538 22.1
Lj2C224T11 Lonicera japonica HOM05D004501 ORTHO05D004944 1.0e-08 67.0 578 24.0
Pp3c10_5410 Physcomitrium patens HOM05D004501 ORTHO05D004944 1.0e-08 67.0 544 24.8
THA.LOC104810067 Tarenaya hassleriana HOM05D004501 ORTHO05D004944 1.0e-08 67.0 619 23.6
Atru.chr9.1263 Acer truncatum HOM05D004501 ORTHO05D004944 1.8e-08 66.2 546 23.3
Duzib205G0832 Durio zibethinus HOM05D004501 ORTHO05D004944 1.8e-08 66.2 552 22.8
EL10Ac5g12334 Beta vulgaris HOM05D004501 ORTHO05D004944 2.3e-08 65.9 530 25.5
CDE02G3094 Ceratophyllum demersum HOM05D004501 ORTHO05D004944 4.0e-08 65.1 510 25.9
COL.COLO4_37109 Corchorus olitorius HOM05D004501 ORTHO05D004944 5.2e-08 64.7 546 22.7
Ah.12g054390 Amaranthus hybridus HOM05D004501 ORTHO05D004944 6.8e-08 64.3 559 22.2
MELO3C005513.2 Cucumis melo HOM05D004501 ORTHO05D004944 8.9e-08 63.9 547 23.8
Dinv39174 Davidia involucrata HOM05D004501 ORTHO05D004944 1.5e-07 63.2 335 22.7
Lsat_1_v5_gn_6_93441 Lactuca sativa HOM05D004501 ORTHO05D004944 1.5e-07 63.2 544 22.1
Pp3c24_4970 Physcomitrium patens HOM05D004501 ORTHO05D004944 2.6e-07 62.4 585 25.0
FAN18G4013 Fragaria x ananassa HOM05D004501 ORTHO05D004944 3.4e-07 62.0 286 27.6
Ciclev10018712m.g Citrus clementina HOM05D004501 ORTHO05D004944 9.8e-07 60.5 578 22.1
SMO356G0217 Selaginella moellendorffii HOM05D004501 ORTHO05D004944 1.3e-06 60.1 538 24.3
Duzib068G0690 Durio zibethinus HOM05D004501 ORTHO05D004944 1.7e-06 59.7 548 23.5
AUR62007118 Chenopodium quinoa HOM05D004501 ORTHO05D004944 8.3e-06 57.4 545 22.8


User provided reference genes

Program Settings