Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO16G545 Micromonas commoda HOM05D005549 ORTHO05D006771 1.1e-261 906.0 433 100.0
Migut.K00304 Erythranthe guttata HOM05D005549 ORTHO05D006771 4.3e-43 179.9 423 31.9
Hund09451 Selenicereus undatus HOM05D005549 ORTHO05D006771 5.6e-43 179.5 425 31.1
Carub.0008s2372 Capsella rubella HOM05D005549 ORTHO05D006771 9.5e-43 178.7 423 30.3
Actinidia19108 Actinidia chinensis HOM05D005549 ORTHO05D006771 1.1e-41 175.3 426 31.2
FAN08G3612 Fragaria x ananassa HOM05D005549 ORTHO05D006771 1.4e-41 174.9 428 31.5
RcHm_v2.0_Chr7g0193241 Rosa chinensis HOM05D005549 ORTHO05D006771 1.8e-41 174.5 429 31.5
Atru.chr9.2502 Acer truncatum HOM05D005549 ORTHO05D006771 3.1e-41 173.7 429 31.5
Manes.06G106600 Manihot esculenta HOM05D005549 ORTHO05D006771 4.0e-41 173.3 428 32.9
EL10Ac5g10725 Beta vulgaris HOM05D005549 ORTHO05D006771 5.2e-41 172.9 427 31.1
AUR62008189 Chenopodium quinoa HOM05D005549 ORTHO05D006771 6.8e-41 172.6 428 31.1
Peaxi162Scf00075g00159 Petunia axillaris HOM05D005549 ORTHO05D006771 6.8e-41 172.6 427 32.3
PGSC0003DMG400028373 Solanum tuberosum HOM05D005549 ORTHO05D006771 6.8e-41 172.6 422 31.3
SMO367G1205 Selaginella moellendorffii HOM05D005549 ORTHO05D006771 1.2e-40 171.8 424 31.1
Sopen05g007130 Solanum pennellii HOM05D005549 ORTHO05D006771 1.2e-40 171.8 422 31.5
FvH4_5g05540 Fragaria vesca HOM05D005549 ORTHO05D006771 3.4e-40 170.2 430 31.2
FAN18G0652 Fragaria x ananassa HOM05D005549 ORTHO05D006771 3.4e-40 170.2 430 31.2
Sabra14G0003300 Salix brachista HOM05D005549 ORTHO05D006771 4.4e-40 169.9 427 32.3
Sopen05g007150 Solanum pennellii HOM05D005549 ORTHO05D006771 7.5e-40 169.1 422 31.0
Potri.014G000900 Populus trichocarpa HOM05D005549 ORTHO05D006771 1.7e-39 167.9 427 32.6
Thecc.03G015300 Theobroma cacao HOM05D005549 ORTHO05D006771 1.7e-39 167.9 428 30.6
Cc04_g12210 Coffea canephora HOM05D005549 ORTHO05D006771 2.2e-39 167.5 428 31.1
FAN18G1717 Fragaria x ananassa HOM05D005549 ORTHO05D006771 3.7e-39 166.8 430 30.9
Rhsim12G0166100 Rhododendron simsii HOM05D005549 ORTHO05D006771 3.7e-39 166.8 424 31.6
vmacro16625 Vaccinium macrocarpon HOM05D005549 ORTHO05D006771 4.9e-39 166.4 429 30.8
Thhalv10004522m.g Eutrema salsugineum HOM05D005549 ORTHO05D006771 6.4e-39 166.0 422 30.1
Sp2g26140 Schrenkiella parvula HOM05D005549 ORTHO05D006771 8.3e-39 165.6 422 30.3
CARHR276820 Cardamine hirsuta HOM05D005549 ORTHO05D006771 1.4e-38 164.9 422 30.1
Aa31LG11G650 Aethionema arabicum HOM05D005549 ORTHO05D006771 2.4e-38 164.1 422 29.4
Duzib205G0052 Durio zibethinus HOM05D005549 ORTHO05D006771 2.4e-38 164.1 428 30.1
MSTRG.26261 Avicennia marina HOM05D005549 ORTHO05D006771 7.1e-38 162.5 432 31.2
Gohir.A09G171200 Gossypium hirsutum HOM05D005549 ORTHO05D006771 1.2e-37 161.8 426 31.5
TAR622G1114 Trochodendron aralioides HOM05D005549 ORTHO05D006771 1.2e-37 161.8 428 29.4
Dinv38568 Davidia involucrata HOM05D005549 ORTHO05D006771 2.1e-37 161.0 428 31.5
CiPaw.11G024000 Carya illinoinensis HOM05D005549 ORTHO05D006771 2.7e-37 160.6 426 30.3
Pp3c9_15370 Physcomitrium patens HOM05D005549 ORTHO05D006771 2.7e-37 160.6 437 30.9
Prupe.5G171000 Prunus persica HOM05D005549 ORTHO05D006771 3.5e-37 160.2 425 29.4
SHI17110 Sapria himalayana HOM05D005549 ORTHO05D006771 3.5e-37 160.2 425 30.6
Peaxi162Scf00141g00210 Petunia axillaris HOM05D005549 ORTHO05D006771 6.0e-37 159.5 353 32.0
AT5G63010 Arabidopsis thaliana HOM05D005549 ORTHO05D006771 1.0e-36 158.7 424 29.5
Gohir.D09G166900 Gossypium hirsutum HOM05D005549 ORTHO05D006771 3.9e-36 156.8 425 30.8
Gorai.006G188700 Gossypium raimondii HOM05D005549 ORTHO05D006771 1.5e-35 154.8 427 30.7
unitig_37.g12682 Utricularia gibba HOM05D005549 ORTHO05D006771 1.5e-35 154.8 426 30.0
FAN04G2905 Fragaria x ananassa HOM05D005549 ORTHO05D006771 1.9e-35 154.5 430 29.8
Hma1.2p1_0046F.1_g026660 Hydrangea macrophylla HOM05D005549 ORTHO05D006771 1.9e-35 154.5 460 30.0
Os04g0507900 Oryza sativa ssp. japonica HOM05D005549 ORTHO05D006771 4.3e-35 153.3 428 29.4
QL10p009538 Quercus lobata HOM05D005549 ORTHO05D006771 5.6e-35 152.9 425 28.9
Haze_07531 Corylus avellana HOM05D005549 ORTHO05D006771 7.3e-35 152.5 426 30.3
MBI16_g05472_MAGBIO Magnolia biondii HOM05D005549 ORTHO05D006771 1.6e-34 151.4 428 29.9
Sc12g0005230 Simmondsia chinensis HOM05D005549 ORTHO05D006771 2.1e-34 151.0 427 29.7
MD06G1171600 Malus domestica HOM05D005549 ORTHO05D006771 1.1e-33 148.7 425 29.2
TWI14G0382 Tripterygium wilfordii HOM05D005549 ORTHO05D006771 1.1e-33 148.7 356 30.6
Ciclev10020953m.g Citrus clementina HOM05D005549 ORTHO05D006771 1.8e-33 147.9 355 33.2
Nitab4.5_0002265g0110 Nicotiana tabacum HOM05D005549 ORTHO05D006771 4.0e-33 146.7 397 29.5
AUR62030941 Chenopodium quinoa HOM05D005549 ORTHO05D006771 1.2e-32 145.2 274 32.8
Mapoly0027s0008 Marchantia polymorpha HOM05D005549 ORTHO05D006771 2.6e-32 144.1 433 28.2
Solyc05g012300.1 Solanum lycopersicum HOM05D005549 ORTHO05D006771 2.6e-32 144.1 269 33.8
Solyc05g012320.1 Solanum lycopersicum HOM05D005549 ORTHO05D006771 2.6e-32 144.1 269 33.8
CBR_g24288 Chara braunii HOM05D005549 ORTHO05D006771 9.9e-32 142.1 559 25.9
Aqoxy3G02864 Aquilegia oxysepala HOM05D005549 ORTHO05D006771 1.7e-31 141.4 422 29.4
Zm00001eb426250 Zea mays HOM05D005549 ORTHO05D006771 2.2e-31 141.0 427 28.6
Cpa.g.c31519.1 Carica papaya HOM05D005549 ORTHO05D006771 2.9e-31 140.6 274 34.3
CANSAT25G1426 Cannabis sativa HOM05D005549 ORTHO05D006771 4.9e-31 139.8 425 28.5
Nitab4.5_0001239g0020 Nicotiana tabacum HOM05D005549 ORTHO05D006771 8.4e-31 139.0 391 29.2
Nn4g25809 Nelumbo nucifera HOM05D005549 ORTHO05D006771 1.1e-30 138.7 428 28.3
Ah.02g110600 Amaranthus hybridus HOM05D005549 ORTHO05D006771 2.4e-30 137.5 426 28.9
Eucgr.H00383 Eucalyptus grandis HOM05D005549 ORTHO05D006771 4.1e-30 136.7 350 30.3
Lj3C19G0 Lonicera japonica HOM05D005549 ORTHO05D006771 4.1e-30 136.7 426 27.7
AL8G40040 Arabidopsis lyrata HOM05D005549 ORTHO05D006771 5.4e-30 136.3 425 27.8
ATR0807G008 Amborella trichopoda HOM05D005549 ORTHO05D006771 4.6e-29 133.3 277 30.7
PRCOL_00001377 Prasinoderma coloniale HOM05D005549 ORTHO05D006771 4.6e-29 133.3 420 31.2
DCAR_016476 Daucus carota HOM05D005549 ORTHO05D006771 6.0e-29 132.9 354 29.4
arahy.Tifrunner.gnm1.ann1.7VTX70 Arachis hypogaea HOM05D005549 ORTHO05D006771 7.8e-29 132.5 428 28.3
Atru.chr9.2510 Acer truncatum HOM05D005549 ORTHO05D006771 1.7e-28 131.3 246 33.3
arahy.Tifrunner.gnm1.ann1.386HL4 Arachis hypogaea HOM05D005549 ORTHO05D006771 1.7e-28 131.3 426 28.2
HPP92_021890 Vanilla planifolia HOM05D005549 ORTHO05D006771 1.7e-28 131.3 422 28.4
Peaxi162Scf00141g10027 Petunia axillaris HOM05D005549 ORTHO05D006771 6.6e-28 129.4 221 34.8
AagrBONN_evm.TU.Sc2ySwM_228.3282 Anthoceros agrestis HOM05D005549 ORTHO05D006771 8.6e-28 129.0 433 27.9
TPR.G8611 Trifolium pratense HOM05D005549 ORTHO05D006771 3.3e-27 127.1 435 27.8
LjContig00081g0017630 Lotus japonicus HOM05D005549 ORTHO05D006771 3.6e-26 123.6 431 28.1
Potri.012G087300 Populus trichocarpa HOM05D005549 ORTHO05D006771 1.1e-25 122.1 273 32.2
GSVIVG01007718001 Vitis vinifera HOM05D002875 ORTHO05D003215 5.2e-25 119.8 377 30.5
arahy.Tifrunner.gnm1.ann1.BH3JLW Arachis hypogaea HOM05D005549 ORTHO05D006771 2.0e-24 117.9 421 27.3
Eucgr.C01244 Eucalyptus grandis HOM05D005549 ORTHO05D006771 5.8e-24 116.3 245 29.8
FAN13G1520 Fragaria x ananassa HOM05D005549 ORTHO05D006771 2.9e-23 114.0 425 27.1
Ca_06401_v3 Cicer arietinum L. HOM05D005549 ORTHO05D006771 6.4e-23 112.8 427 26.7
CSS0043757 Camellia sinensis var. sinensis HOM05D005549 ORTHO05D006771 1.9e-22 111.3 191 34.6
VMungo1127G1558 Vigna mungo HOM05D005549 ORTHO05D006771 2.4e-22 110.9 426 26.5
THA.LOC104818503 Tarenaya hassleriana HOM05D005549 ORTHO05D006771 3.2e-22 110.5 269 29.0
Oeu024700.1 Olea europaea HOM05D005549 ORTHO05D006771 4.2e-22 110.2 427 26.5
BcaB02g09715 Brassica carinata HOM05D005549 ORTHO05D006771 7.1e-22 109.4 424 26.7
COL.COLO4_30080 Corchorus olitorius HOM05D005549 ORTHO05D006771 7.1e-22 109.4 331 26.3
PGR031G3229 Punica granatum HOM05D005549 ORTHO05D006771 7.1e-22 109.4 336 26.8
Medtr5g096040 Medicago truncatula HOM05D005549 ORTHO05D006771 2.7e-21 107.5 274 31.0
Glyma.09G077900 Glycine max HOM05D005549 ORTHO05D006771 2.3e-20 104.4 273 30.4
arahy.Tifrunner.gnm1.ann1.BVT45G Arachis hypogaea HOM05D005549 ORTHO05D006771 3.0e-20 104.0 271 30.3
ECA232G3151 Erigeron canadensis HOM05D005549 ORTHO05D006771 3.9e-20 103.6 427 25.5
Glyma.08G230900 Glycine max HOM05D005549 ORTHO05D006771 3.9e-20 103.6 273 30.0
Lsat_1_v5_gn_4_75780 Lactuca sativa HOM05D005549 ORTHO05D006771 5.1e-20 103.2 424 25.2
Lalb_Chr04g0247841 Lupinus albus HOM05D005549 ORTHO05D006771 5.1e-20 103.2 273 31.1
Psat2g007040 Pisum sativum HOM05D005549 ORTHO05D006771 8.7e-20 102.4 272 30.1
arahy.Tifrunner.gnm1.ann1.8228C9 Arachis hypogaea HOM05D005549 ORTHO05D006771 2.5e-19 100.9 248 31.0
arahy.Tifrunner.gnm1.ann1.DCL1V8 Arachis hypogaea HOM05D005549 ORTHO05D006771 2.5e-19 100.9 248 31.0
CDE02G3271 Ceratophyllum demersum HOM05D005549 ORTHO05D006771 7.3e-19 99.4 287 29.3
Glyma.15G218700 Glycine max HOM05D005549 ORTHO05D006771 9.6e-19 99.0 275 29.8
BraA06t25926Z Brassica rapa HOM05D005549 ORTHO05D006771 1.6e-18 98.2 271 29.9
HanXRQChr16g0506951 Helianthus annuus HOM05D005549 ORTHO05D006771 2.8e-18 97.4 241 28.6
Phvul.011G182066 Phaseolus vulgaris HOM05D005549 ORTHO05D006771 1.1e-17 95.5 289 29.1
SGA_v2.0_scaffold293G47425 Striga asiatica HOM05D005549 ORTHO05D006771 1.8e-17 94.7 349 26.6
Eucgr.H00387 Eucalyptus grandis HOM05D005549 ORTHO05D006771 3.1e-17 94.0 241 29.0
PSO478G4565 Papaver somniferum HOM05D005549 ORTHO05D006771 4.0e-17 93.6 331 27.2
CsaV3_1G001440 Cucumis sativus L. HOM05D005549 ORTHO05D006771 6.9e-17 92.8 283 28.3
Phvul.011G182000 Phaseolus vulgaris HOM05D005549 ORTHO05D006771 3.4e-16 90.5 288 28.5
ECA232G2898 Erigeron canadensis HOM05D005549 ORTHO05D006771 4.4e-16 90.1 274 27.0
Cre10.g434300 Chlamydomonas reinhardtii HOM05D005549 ORTHO05D006771 5.8e-16 89.7 398 26.9
A06p29790 Brassica napus HOM05D005549 ORTHO05D006771 9.9e-16 89.0 271 27.3
BcaC01g02548 Brassica carinata HOM05D005549 ORTHO05D006771 1.7e-15 88.2 349 26.1
C03p63600 Brassica napus HOM05D005549 ORTHO05D006771 1.7e-15 88.2 349 26.1
BolC3t18618H Brassica oleracea HOM05D005549 ORTHO05D006771 1.7e-15 88.2 349 26.1
HanXRQChr09g0272091 Helianthus annuus HOM05D005549 ORTHO05D006771 3.8e-15 87.0 272 27.2
ClCG06G017070 Citrullus lanatus HOM05D005549 ORTHO05D006771 6.4e-15 86.3 295 27.8
Sed0023293 Sechium edule HOM05D005549 ORTHO05D006771 9.3e-14 82.4 283 28.3
MELO3C017092.2 Cucumis melo HOM05D005549 ORTHO05D006771 1.9e-11 74.7 294 26.9
MD06G1171300 Malus domestica HOM05D005549 ORTHO05D006771 7.6e-08 62.8 144 28.5
Cfa024910 Carpinus fangiana HOM05D005549 ORTHO05D006771 4.2e-06 57.0 429 23.1


User provided reference genes

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