Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO16G520 Micromonas commoda HOM05D005556 ORTHO05D006304 1.2e-205 719.5 357 100.0
PRCOL_00000010 Prasinoderma coloniale HOM05D003369 ORTHO05D004089 2.7e-91 339.7 337 53.7
Phvul.002G216600 Phaseolus vulgaris HOM05D005556 ORTHO05D006304 1.4e-20 104.8 300 28.0
SHI04909 Sapria himalayana HOM05D005556 ORTHO05D006304 1.6e-19 101.3 329 26.4
VMungo0251G3662 Vigna mungo HOM05D005556 ORTHO05D006304 1.6e-19 101.3 300 27.7
arahy.Tifrunner.gnm1.ann1.GBZ5J5 Arachis hypogaea HOM05D005556 ORTHO05D006304 1.8e-18 97.8 300 27.0
PGR042G0433 Punica granatum HOM05D005556 ORTHO05D006304 3.9e-18 96.7 307 25.1
Eucgr.G01120 Eucalyptus grandis HOM05D005556 ORTHO05D006304 5.1e-18 96.3 311 26.4
Glyma.08G064100 Glycine max HOM05D005556 ORTHO05D006304 5.1e-18 96.3 300 27.0
HanXRQChr09g0250811 Helianthus annuus HOM05D005556 ORTHO05D006304 5.1e-18 96.3 308 26.9
Os12g0482700 Oryza sativa ssp. japonica HOM05D005556 ORTHO05D006304 5.1e-18 96.3 310 27.1
Aa31sc730G30 Aethionema arabicum HOM05D005556 ORTHO05D006304 6.7e-18 95.9 308 26.9
Sp7g31400 Schrenkiella parvula HOM05D005556 ORTHO05D006304 8.7e-18 95.5 324 26.9
Ca_18422_v3 Cicer arietinum L. HOM05D005556 ORTHO05D006304 1.1e-17 95.1 300 27.3
Potri.009G081300 Populus trichocarpa HOM05D005556 ORTHO05D006304 1.1e-17 95.1 325 25.5
arahy.Tifrunner.gnm1.ann1.ASR1GR Arachis hypogaea HOM05D005556 ORTHO05D006304 1.5e-17 94.7 300 26.7
Dinv09497 Davidia involucrata HOM05D005556 ORTHO05D006304 1.9e-17 94.4 300 26.3
Actinidia02420 Actinidia chinensis HOM05D005556 ORTHO05D006304 2.5e-17 94.0 319 26.0
MSTRG.16652 Avicennia marina HOM05D005556 ORTHO05D006304 2.5e-17 94.0 347 25.9
Thhalv10025723m.g Eutrema salsugineum HOM05D005556 ORTHO05D006304 2.5e-17 94.0 325 26.8
Medtr4g092750 Medicago truncatula HOM05D005556 ORTHO05D006304 2.5e-17 94.0 308 26.3
Potri.001G287100 Populus trichocarpa HOM05D005556 ORTHO05D006304 2.5e-17 94.0 299 26.1
TPR.G16873 Trifolium pratense HOM05D005556 ORTHO05D006304 2.5e-17 94.0 308 25.6
Ciclev10028842m.g Citrus clementina HOM05D005556 ORTHO05D006304 3.3e-17 93.6 299 26.4
THA.LOC104807192 Tarenaya hassleriana HOM05D005556 ORTHO05D006304 4.3e-17 93.2 324 26.9
Cfa004765 Carpinus fangiana HOM05D005556 ORTHO05D006304 5.7e-17 92.8 329 25.5
COL.COLO4_17842 Corchorus olitorius HOM05D005556 ORTHO05D006304 7.4e-17 92.4 322 25.2
Nn5g29135 Nelumbo nucifera HOM05D005556 ORTHO05D006304 7.4e-17 92.4 300 27.0
TWI23G1245 Tripterygium wilfordii HOM05D005556 ORTHO05D006304 7.4e-17 92.4 318 26.1
CsaV3_7G007220 Cucumis sativus L. HOM05D005556 ORTHO05D006304 9.7e-17 92.0 300 26.3
ECA240G4430 Erigeron canadensis HOM05D005556 ORTHO05D006304 9.7e-17 92.0 307 26.4
Zm00001eb408730 Zea mays HOM05D005556 ORTHO05D006304 9.7e-17 92.0 313 26.2
AT4G33670 Arabidopsis thaliana HOM05D005556 ORTHO05D006304 1.3e-16 91.7 316 25.9
Carub.0007s0675 Capsella rubella HOM05D005556 ORTHO05D006304 1.3e-16 91.7 319 27.6
DCAR_021917 Daucus carota HOM05D005556 ORTHO05D006304 1.3e-16 91.7 308 26.6
QL11p027090 Quercus lobata HOM05D005556 ORTHO05D006304 1.3e-16 91.7 300 26.3
GSVIVG01036958001 Vitis vinifera HOM05D005556 ORTHO05D006304 1.3e-16 91.7 300 26.0
MELO3C018576.2 Cucumis melo HOM05D005556 ORTHO05D006304 1.6e-16 91.3 302 26.5
Lalb_Chr09g0327041 Lupinus albus HOM05D005556 ORTHO05D006304 1.6e-16 91.3 300 26.7
Manes.07G048500 Manihot esculenta HOM05D005556 ORTHO05D006304 2.2e-16 90.9 349 24.4
CiPaw.06G161400 Carya illinoinensis HOM05D005556 ORTHO05D006304 2.8e-16 90.5 333 25.8
Gorai.008G042900 Gossypium raimondii HOM05D005556 ORTHO05D006304 2.8e-16 90.5 322 24.8
PSO210G4879 Papaver somniferum HOM05D005556 ORTHO05D006304 2.8e-16 90.5 316 25.6
PSO761G0683 Papaver somniferum HOM05D005556 ORTHO05D006304 2.8e-16 90.5 327 25.7
Psat7g103600 Pisum sativum HOM05D005556 ORTHO05D006304 2.8e-16 90.5 303 25.1
TAR628G0311 Trochodendron aralioides HOM05D005556 ORTHO05D006304 2.8e-16 90.5 300 25.7
RcHm_v2.0_Chr6g0246091 Rosa chinensis HOM05D005556 ORTHO05D006304 3.7e-16 90.1 308 26.3
Thecc.02G035400 Theobroma cacao HOM05D005556 ORTHO05D006304 4.8e-16 89.7 308 25.0
CSS0007132 Camellia sinensis var. sinensis HOM05D005556 ORTHO05D006304 6.3e-16 89.4 308 25.6
CSS0048948 Camellia sinensis var. sinensis HOM05D005556 ORTHO05D006304 6.3e-16 89.4 308 25.6
Gohir.A12G031200 Gossypium hirsutum HOM05D005556 ORTHO05D006304 6.3e-16 89.4 322 24.5
Gohir.D12G041100 Gossypium hirsutum HOM05D005556 ORTHO05D006304 6.3e-16 89.4 322 24.8
Sabra16G0179600 Salix brachista HOM05D005556 ORTHO05D006304 6.3e-16 89.4 299 25.1
Ah.01g024290 Amaranthus hybridus HOM05D005556 ORTHO05D006304 8.2e-16 89.0 301 26.6
Cc02_g20430 Coffea canephora HOM05D005556 ORTHO05D006304 8.2e-16 89.0 331 24.8
Sopen01g048820 Solanum pennellii HOM05D005556 ORTHO05D006304 8.2e-16 89.0 310 26.5
Nitab4.5_0001477g0210 Nicotiana tabacum HOM05D005556 ORTHO05D006304 1.1e-15 88.6 322 26.4
SEGI_28357 Sequoiadendron giganteum HOM05D005556 ORTHO05D006304 1.1e-15 88.6 326 25.8
BraA03t15255Z Brassica rapa HOM05D005556 ORTHO05D006304 1.4e-15 88.2 325 25.8
Aqoxy6G00609 Aquilegia oxysepala HOM05D005556 ORTHO05D006304 1.8e-15 87.8 308 25.3
FAN24G1262 Fragaria x ananassa HOM05D005556 ORTHO05D006304 1.8e-15 87.8 308 25.3
FAN27G0195 Fragaria x ananassa HOM05D005556 ORTHO05D006304 1.8e-15 87.8 308 25.3
PGSC0003DMG400003102 Solanum tuberosum HOM05D005556 ORTHO05D006304 1.8e-15 87.8 324 26.2
Nitab4.5_0012619g0020 Nicotiana tabacum HOM05D005556 ORTHO05D006304 2.4e-15 87.4 322 26.4
BcaNung02190 Brassica carinata HOM05D005556 ORTHO05D006304 4.1e-15 86.7 325 26.2
Haze_10362 Corylus avellana HOM05D005556 ORTHO05D006304 4.1e-15 86.7 316 25.3
FAN15G0833 Fragaria x ananassa HOM05D005556 ORTHO05D006304 4.1e-15 86.7 308 25.3
vmacro01911 Vaccinium macrocarpon HOM05D005556 ORTHO05D006304 4.1e-15 86.7 302 25.5
AL7G17810 Arabidopsis lyrata HOM05D005556 ORTHO05D006304 5.3e-15 86.3 316 25.3
C07p59820 Brassica napus HOM05D005556 ORTHO05D006304 5.3e-15 86.3 325 25.8
BolC7t46427H Brassica oleracea HOM05D005556 ORTHO05D006304 5.3e-15 86.3 308 26.0
Ca_18437_v3 Cicer arietinum L. HOM05D005556 ORTHO05D006304 5.3e-15 86.3 316 25.6
Duzib132G0943 Durio zibethinus HOM05D005556 ORTHO05D006304 5.3e-15 86.3 308 24.0
Hma1.2p1_0435F.1_g152480 Hydrangea macrophylla HOM05D005556 ORTHO05D006304 5.3e-15 86.3 300 25.3
Oeu059877.1 Olea europaea HOM05D005556 ORTHO05D006304 5.3e-15 86.3 326 26.4
Sed0016178 Sechium edule HOM05D005556 ORTHO05D006304 5.3e-15 86.3 273 26.4
Lsat_1_v5_gn_9_114260 Lactuca sativa HOM05D005556 ORTHO05D006304 6.9e-15 85.9 300 25.7
A03p62160 Brassica napus HOM05D005556 ORTHO05D006304 9.0e-15 85.5 325 25.5
AUR62027065 Chenopodium quinoa HOM05D005556 ORTHO05D006304 9.0e-15 85.5 302 25.5
MBI16_g35805_MAGBIO Magnolia biondii HOM05D005556 ORTHO05D006304 9.0e-15 85.5 308 25.3
BcaB03g12782 Brassica carinata HOM05D005556 ORTHO05D006304 1.2e-14 85.1 312 26.0
CANSAT25G0859 Cannabis sativa HOM05D005556 ORTHO05D006304 1.2e-14 85.1 300 24.7
Migut.B00506 Erythranthe guttata HOM05D005556 ORTHO05D006304 1.2e-14 85.1 299 25.4
Manes.10G090900 Manihot esculenta HOM05D005556 ORTHO05D006304 1.2e-14 85.1 272 26.1
Prupe.8G157600 Prunus persica HOM05D005556 ORTHO05D006304 1.2e-14 85.1 308 25.6
BraA08t33702Z Brassica rapa HOM05D002023 ORTHO05D002049 1.5e-14 84.7 323 25.7
CARHR241760 Cardamine hirsuta HOM05D005556 ORTHO05D006304 1.5e-14 84.7 327 26.0
AUR62013157 Chenopodium quinoa HOM05D005556 ORTHO05D006304 1.5e-14 84.7 302 25.8
AUR62030906 Chenopodium quinoa HOM05D005556 ORTHO05D006304 1.5e-14 84.7 302 25.8
Peaxi162Scf00299g00339 Petunia axillaris HOM05D005556 ORTHO05D006304 1.5e-14 84.7 257 28.0
Sc08g0004230 Simmondsia chinensis HOM05D005556 ORTHO05D006304 1.5e-14 84.7 320 25.9
SGA_v2.0_scaffold342G49419 Striga asiatica HOM05D005556 ORTHO05D006304 1.5e-14 84.7 321 24.9
EL10Ac9g22141 Beta vulgaris HOM05D005556 ORTHO05D006304 2.0e-14 84.3 302 25.5
Lj4g0008817 Lotus japonicus HOM05D005556 ORTHO05D006304 2.0e-14 84.3 302 26.2
Solyc01g106450.3 Solanum lycopersicum HOM05D005556 ORTHO05D006304 2.0e-14 84.3 310 25.8
Dinv16044 Davidia involucrata HOM05D005556 ORTHO05D006304 2.6e-14 84.0 249 27.3
A08p17470 Brassica napus HOM05D005556 ORTHO05D006304 3.4e-14 83.6 307 25.7
CBR_g34727 Chara braunii HOM05D005556 ORTHO05D006304 5.9e-14 82.8 254 27.6
COL.COLO4_17843 Corchorus olitorius HOM05D005556 ORTHO05D006304 7.6e-14 82.4 310 25.5
unitig_21.g20707 Utricularia gibba HOM05D005556 ORTHO05D006304 7.6e-14 82.4 313 24.0
FvH4_2g02330 Fragaria vesca HOM05D005556 ORTHO05D006304 1.7e-13 81.3 249 27.7
Cpa.g.sc20.62 Carica papaya HOM05D005556 ORTHO05D006304 3.8e-13 80.1 299 23.7
MD05G1113100 Malus domestica HOM05D005556 ORTHO05D006304 8.5e-13 79.0 300 24.7
FAN20G2516 Fragaria x ananassa HOM05D005556 ORTHO05D006304 1.9e-12 77.8 291 25.1
Rhsim11G0145300 Rhododendron simsii HOM05D005556 ORTHO05D006304 1.9e-12 77.8 320 25.0
SalBow6G1008 Salvia bowleyana HOM05D005556 ORTHO05D006304 3.2e-12 77.0 249 26.9
Hund06487 Selenicereus undatus HOM05D005556 ORTHO05D006304 7.2e-12 75.9 302 25.2
Eucgr.G01122 Eucalyptus grandis HOM05D005556 ORTHO05D006304 2.5e-09 67.4 221 29.0
MD10G1115600 Malus domestica HOM05D005556 ORTHO05D006304 3.7e-08 63.5 300 23.0
ClCG02G007540 Citrullus lanatus HOM05D005556 ORTHO05D006304 1.1e-07 62.0 190 26.3
CARHR051720 Cardamine hirsuta HOM05D000352 ORTHO05D000260 2.6e-06 57.4 240 27.9
Thhalv10023569m.g Eutrema salsugineum HOM05D000352 ORTHO05D000260 2.6e-06 57.4 240 27.1
HanXRQChr02g0058061 Helianthus annuus HOM05D000352 ORTHO05D000260 3.4e-06 57.0 242 25.6


User provided reference genes

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