Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO16G462 Micromonas commoda HOM05D007070 ORTHO05D008892 4.9e-129 464.5 245 100.0
Cre08.g358540 Chlamydomonas reinhardtii HOM05D007070 ORTHO05D008892 8.9e-30 134.8 204 36.8
PRCOL_00004582 Prasinoderma coloniale HOM05D007070 ORTHO05D008892 3.1e-22 109.8 103 49.5
Os03g0170500 Oryza sativa ssp. japonica HOM05D007070 ORTHO05D008892 1.5e-21 107.5 122 42.6
HanXRQChr08g0209191 Helianthus annuus HOM05D007070 ORTHO05D008892 2.0e-21 107.1 121 43.8
Nitab4.5_0000141g0310 Nicotiana tabacum HOM05D007070 ORTHO05D008892 9.9e-21 104.8 123 39.8
Nitab4.5_0012600g0010 Nicotiana tabacum HOM05D007070 ORTHO05D008892 9.9e-21 104.8 123 39.8
PSO832G2327 Papaver somniferum HOM05D007070 ORTHO05D008892 1.3e-20 104.4 134 38.8
Psat2g122360 Pisum sativum HOM05D007070 ORTHO05D008892 1.3e-20 104.4 123 42.3
Dinv34174 Davidia involucrata HOM05D007070 ORTHO05D008892 1.7e-20 104.0 128 41.4
Duzib251G0126 Durio zibethinus HOM05D007070 ORTHO05D008892 1.7e-20 104.0 128 39.8
PSO591G0158 Papaver somniferum HOM05D007070 ORTHO05D008892 1.7e-20 104.0 122 41.8
CANSAT56G2723 Cannabis sativa HOM05D007070 ORTHO05D008892 2.2e-20 103.6 120 40.8
Cre07.g321300 Chlamydomonas reinhardtii HOM05D007070 ORTHO05D008892 2.2e-20 103.6 116 37.9
Lj2g0006172 Lotus japonicus HOM05D007070 ORTHO05D008892 2.2e-20 103.6 112 45.5
Medtr5g038970 Medicago truncatula HOM05D007070 ORTHO05D008892 2.2e-20 103.6 128 41.4
Gohir.A13G072600 Gossypium hirsutum HOM05D007070 ORTHO05D008892 3.8e-20 102.8 118 40.7
FAN07G2888 Fragaria x ananassa HOM05D007070 ORTHO05D008892 4.9e-20 102.4 131 40.5
Lsat_1_v5_gn_8_52140 Lactuca sativa HOM05D007070 ORTHO05D008892 4.9e-20 102.4 112 42.9
Ah.02g131260 Amaranthus hybridus HOM05D007070 ORTHO05D008892 6.4e-20 102.1 154 36.4
Lalb_Chr10g0098121 Lupinus albus HOM05D007070 ORTHO05D008892 6.4e-20 102.1 125 40.8
TWI75G1629 Tripterygium wilfordii HOM05D007070 ORTHO05D008892 6.4e-20 102.1 127 40.9
COL.COLO4_22972 Corchorus olitorius HOM05D007070 ORTHO05D008892 8.4e-20 101.7 153 35.9
Sed0007814 Sechium edule HOM05D007070 ORTHO05D008892 8.4e-20 101.7 128 42.2
Zm00001eb402240 Zea mays HOM05D007070 ORTHO05D008892 8.4e-20 101.7 122 40.2
Ca_04760_v3 Cicer arietinum L. HOM05D007070 ORTHO05D008892 1.1e-19 101.3 109 45.0
Cpa.g.sc183.28 Carica papaya HOM05D007070 ORTHO05D008892 1.4e-19 100.9 109 43.1
Thecc.02G352500 Theobroma cacao HOM05D007070 ORTHO05D008892 1.4e-19 100.9 127 40.2
Cc11_g13320 Coffea canephora HOM05D007070 ORTHO05D008892 1.9e-19 100.5 109 44.0
FAN17G0782 Fragaria x ananassa HOM05D007070 ORTHO05D008892 1.9e-19 100.5 131 39.7
Gorai.013G083500 Gossypium raimondii HOM05D007070 ORTHO05D008892 1.9e-19 100.5 118 39.8
Hma1.2p1_0598F.1_g186810 Hydrangea macrophylla HOM05D007070 ORTHO05D008892 1.9e-19 100.5 154 38.3
Rhsim12G0131600 Rhododendron simsii HOM05D007070 ORTHO05D008892 1.9e-19 100.5 125 40.8
RhsimUnG0241900 Rhododendron simsii HOM05D007070 ORTHO05D008892 1.9e-19 100.5 125 40.8
TPR.G36542 Trifolium pratense HOM05D007070 ORTHO05D008892 1.9e-19 100.5 112 42.9
TAR622G0001 Trochodendron aralioides HOM05D007070 ORTHO05D008892 1.9e-19 100.5 112 42.0
Actinidia31196 Actinidia chinensis HOM05D007070 ORTHO05D008892 2.4e-19 100.1 150 36.0
AL1G26230 Arabidopsis lyrata HOM05D007070 ORTHO05D008892 2.4e-19 100.1 131 41.2
AT1G14345 Arabidopsis thaliana HOM05D007070 ORTHO05D008892 2.4e-19 100.1 131 41.2
ECA236G0127 Erigeron canadensis HOM05D007070 ORTHO05D008892 2.4e-19 100.1 112 43.8
Glyma.02G019200 Glycine max HOM05D007070 ORTHO05D008892 2.4e-19 100.1 121 40.5
SalBow2G0737 Salvia bowleyana HOM05D007070 ORTHO05D008892 2.4e-19 100.1 109 41.3
SalBow2G1571 Salvia bowleyana HOM05D007070 ORTHO05D008892 2.4e-19 100.1 109 41.3
MSTRG.13406 Avicennia marina HOM05D007070 ORTHO05D008892 3.2e-19 99.8 109 43.1
DCAR_007140 Daucus carota HOM05D007070 ORTHO05D008892 3.2e-19 99.8 112 42.0
MD13G1074900 Malus domestica HOM05D007070 ORTHO05D008892 3.2e-19 99.8 113 41.6
Phvul.002G088700 Phaseolus vulgaris HOM05D007070 ORTHO05D008892 3.2e-19 99.8 117 39.3
Aqoxy3G03327 Aquilegia oxysepala HOM05D007070 ORTHO05D008892 4.1e-19 99.4 159 34.6
Duzib268G0688 Durio zibethinus HOM05D007070 ORTHO05D008892 4.1e-19 99.4 125 38.4
FvH4_4g31650 Fragaria vesca HOM05D007070 ORTHO05D008892 4.1e-19 99.4 113 42.5
FAN12G3127 Fragaria x ananassa HOM05D007070 ORTHO05D008892 4.1e-19 99.4 113 42.5
FAN22G1781 Fragaria x ananassa HOM05D007070 ORTHO05D008892 4.1e-19 99.4 113 42.5
RcHm_v2.0_Chr4g0440151 Rosa chinensis HOM05D007070 ORTHO05D008892 4.1e-19 99.4 113 42.5
HPP92_018595 Vanilla planifolia HOM05D007070 ORTHO05D008892 4.1e-19 99.4 123 40.7
Potri.010G093300 Populus trichocarpa HOM05D007070 ORTHO05D008892 5.4e-19 99.0 112 42.0
CARHR014780 Cardamine hirsuta HOM05D007070 ORTHO05D008892 7.1e-19 98.6 112 42.9
AUR62005745 Chenopodium quinoa HOM05D007070 ORTHO05D008892 7.1e-19 98.6 112 41.1
Sp1g12710 Schrenkiella parvula HOM05D007070 ORTHO05D008892 7.1e-19 98.6 112 42.9
Atru.chr11.1834 Acer truncatum HOM05D007070 ORTHO05D008892 9.2e-19 98.2 112 42.9
CiPaw.05G138000 Carya illinoinensis HOM05D007070 ORTHO05D008892 9.2e-19 98.2 109 42.2
Thhalv10008846m.g Eutrema salsugineum HOM05D007070 ORTHO05D008892 9.2e-19 98.2 112 41.1
Glyma.01G044500 Glycine max HOM05D007070 ORTHO05D008892 9.2e-19 98.2 109 42.2
Manes.05G098800 Manihot esculenta HOM05D007070 ORTHO05D008892 9.2e-19 98.2 150 36.0
Prupe.1G271300 Prunus persica HOM05D007070 ORTHO05D008892 9.2e-19 98.2 112 41.1
BcaB02g06484 Brassica carinata HOM05D007070 ORTHO05D008892 1.2e-18 97.8 112 42.0
C05p12140 Brassica napus HOM05D007070 ORTHO05D008892 1.2e-18 97.8 112 42.0
BolC5t29966H Brassica oleracea HOM05D007070 ORTHO05D008892 1.2e-18 97.8 112 42.0
MELO3C012078.2 Cucumis melo HOM05D007070 ORTHO05D008892 1.2e-18 97.8 116 40.5
PGR119G1526 Punica granatum HOM05D007070 ORTHO05D008892 1.2e-18 97.8 125 37.6
Aa31LG1G700 Aethionema arabicum HOM05D007070 ORTHO05D008892 1.6e-18 97.4 109 41.3
A06p10330 Brassica napus HOM05D007070 ORTHO05D008892 1.6e-18 97.4 109 42.2
BraA06t24215Z Brassica rapa HOM05D007070 ORTHO05D008892 1.6e-18 97.4 109 42.2
Ciclev10032797m.g Citrus clementina HOM05D007070 ORTHO05D008892 1.6e-18 97.4 112 42.9
CsaV3_5G032500 Cucumis sativus L. HOM05D007070 ORTHO05D008892 1.6e-18 97.4 116 40.5
Gohir.D13G072700 Gossypium hirsutum HOM05D007070 ORTHO05D008892 1.6e-18 97.4 118 39.0
CSS0037166 Camellia sinensis var. sinensis HOM05D007070 ORTHO05D008892 2.1e-18 97.1 113 40.7
CSS0050316 Camellia sinensis var. sinensis HOM05D007070 ORTHO05D008892 2.1e-18 97.1 113 40.7
Lj3P1040T26 Lonicera japonica HOM05D007070 ORTHO05D008892 2.1e-18 97.1 154 34.4
MBI05_g00391_MAGBIO Magnolia biondii HOM05D007070 ORTHO05D008892 2.1e-18 97.1 122 38.5
QL03p064901 Quercus lobata HOM05D007070 ORTHO05D008892 2.1e-18 97.1 112 42.0
SGA_v2.0_scaffold302G47841 Striga asiatica HOM05D007070 ORTHO05D008892 2.1e-18 97.1 109 40.4
HPP92_018585 Vanilla planifolia HOM05D007070 ORTHO05D008892 2.1e-18 97.1 111 40.5
CBR_g47945 Chara braunii HOM05D007070 ORTHO05D008892 2.7e-18 96.7 211 32.2
VMungo1215G0639 Vigna mungo HOM05D007070 ORTHO05D008892 2.7e-18 96.7 109 40.4
Carub.0001s1403 Capsella rubella HOM05D007070 ORTHO05D008892 3.5e-18 96.3 112 41.1
CDE05G3062 Ceratophyllum demersum HOM05D007070 ORTHO05D008892 3.5e-18 96.3 106 42.5
Haze_12036 Corylus avellana HOM05D007070 ORTHO05D008892 3.5e-18 96.3 149 37.6
Eucgr.G02521 Eucalyptus grandis HOM05D007070 ORTHO05D008892 3.5e-18 96.3 108 42.6
SMO329G0045 Selaginella moellendorffii HOM05D007070 ORTHO05D008892 4.6e-18 95.9 117 41.0
TAR374G1105 Trochodendron aralioides HOM05D007070 ORTHO05D008892 4.6e-18 95.9 163 34.4
unitig_699.g19919 Utricularia gibba HOM05D007070 ORTHO05D008892 7.8e-18 95.1 122 38.5
ClCG05G024460 Citrullus lanatus HOM05D007070 ORTHO05D008892 1.0e-17 94.7 108 41.7
Migut.L01320 Erythranthe guttata HOM05D007070 ORTHO05D008892 1.3e-17 94.4 117 37.6
CAN.G375.28 Capsicum annuum HOM05D007070 ORTHO05D008892 1.7e-17 94.0 112 40.2
Peaxi162Scf00026g00288 Petunia axillaris HOM05D007070 ORTHO05D008892 1.7e-17 94.0 121 40.5
Mapoly0002s0258 Marchantia polymorpha HOM05D007070 ORTHO05D008892 2.3e-17 93.6 124 38.7
Sabra10G0065800 Salix brachista HOM05D007070 ORTHO05D008892 2.3e-17 93.6 123 39.0
arahy.Tifrunner.gnm1.ann1.P1GF9J Arachis hypogaea HOM05D007070 ORTHO05D008892 3.0e-17 93.2 121 38.0
Solyc01g010640.3 Solanum lycopersicum HOM05D007070 ORTHO05D008892 3.0e-17 93.2 112 39.3
Sopen01g006270 Solanum pennellii HOM05D007070 ORTHO05D008892 3.0e-17 93.2 112 39.3
PGSC0003DMG400000874 Solanum tuberosum HOM05D007070 ORTHO05D008892 3.0e-17 93.2 112 39.3
AagrBONN_evm.TU.Sc2ySwM_362.2904 Anthoceros agrestis HOM05D007070 ORTHO05D008892 3.9e-17 92.8 143 35.0
Sc04g0008310 Simmondsia chinensis HOM05D007070 ORTHO05D008892 5.1e-17 92.4 112 42.0
ATR0564G356 Amborella trichopoda HOM05D007070 ORTHO05D008892 6.6e-17 92.0 106 40.6
arahy.Tifrunner.gnm1.ann1.H49BTR Arachis hypogaea HOM05D007070 ORTHO05D008892 8.7e-17 91.7 163 33.7
CDE05G3277 Ceratophyllum demersum HOM05D007070 ORTHO05D008892 8.7e-17 91.7 109 38.5
THA.LOC104805942 Tarenaya hassleriana HOM05D007070 ORTHO05D008892 2.5e-16 90.1 98 44.9
MSTRG.684 Avicennia marina HOM05D007070 ORTHO05D008892 6.2e-15 85.5 101 39.6
SEGI_28311 Sequoiadendron giganteum HOM05D007070 ORTHO05D008892 1.1e-14 84.7 104 38.5
BcaC05g25332 Brassica carinata HOM05D007070 ORTHO05D008892 1.6e-10 70.9 112 35.7
Sc04g0008340 Simmondsia chinensis HOM05D007070 ORTHO05D008892 7.8e-10 68.6 112 31.2
AUR62028813 Chenopodium quinoa HOM05D007070 ORTHO05D008892 1.0e-09 68.2 112 30.4


User provided reference genes

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