Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO16G336 Micromonas commoda HOM05D006027 ORTHO05D007604 3.3e-62 241.5 119 100.0
FvH4_2g20470 Fragaria vesca HOM05D006027 ORTHO05D007604 2.1e-37 159.1 117 61.5
FAN24G3422 Fragaria x ananassa HOM05D006027 ORTHO05D007604 2.1e-37 159.1 117 61.5
SalBow4G0311 Salvia bowleyana HOM05D006027 ORTHO05D007604 8.1e-37 157.1 110 61.8
FAN15G2830 Fragaria x ananassa HOM05D006027 ORTHO05D007604 1.1e-36 156.8 117 60.7
FAN27G2528 Fragaria x ananassa HOM05D006027 ORTHO05D007604 4.0e-36 154.8 117 59.8
PRCOL_00005949 Prasinoderma coloniale HOM05D006027 ORTHO05D007604 5.3e-36 154.5 109 65.1
MD10G1176000 Malus domestica HOM05D006027 ORTHO05D007604 6.9e-36 154.1 109 62.4
MD05G1188500 Malus domestica HOM05D006027 ORTHO05D007604 9.0e-36 153.7 117 58.1
unitig_8.g3074 Utricularia gibba HOM05D006027 ORTHO05D007604 9.0e-36 153.7 117 59.0
Duzib211G0648 Durio zibethinus HOM05D006027 ORTHO05D007604 1.5e-35 152.9 117 59.0
Duzib138G0534 Durio zibethinus HOM05D006027 ORTHO05D007604 2.0e-35 152.5 117 58.1
Mapoly0042s0085 Marchantia polymorpha HOM05D006027 ORTHO05D007604 2.0e-35 152.5 119 60.5
SGA_v2.0_scaffold1G00660 Striga asiatica HOM05D006027 ORTHO05D007604 2.0e-35 152.5 110 61.8
Atru.chr5.1865 Acer truncatum HOM05D006027 ORTHO05D007604 2.6e-35 152.1 117 59.8
Haze_24710 Corylus avellana HOM05D006027 ORTHO05D007604 2.6e-35 152.1 117 58.1
Cpa.g.sc87.33 Carica papaya HOM05D006027 ORTHO05D007604 4.5e-35 151.4 109 62.4
Cfa002488 Carpinus fangiana HOM05D006027 ORTHO05D007604 4.5e-35 151.4 117 58.1
Prupe.8G215000 Prunus persica HOM05D006027 ORTHO05D007604 4.5e-35 151.4 117 58.1
PGR044G2038 Punica granatum HOM05D006027 ORTHO05D007604 4.5e-35 151.4 110 60.9
Migut.D00479 Erythranthe guttata HOM05D006027 ORTHO05D007604 5.8e-35 151.0 110 59.1
Oeu015437.1 Olea europaea HOM05D006027 ORTHO05D007604 5.8e-35 151.0 110 60.0
Thecc.01G249800 Theobroma cacao HOM05D006027 ORTHO05D007604 5.8e-35 151.0 117 57.3
GSVIVG01028434001 Vitis vinifera HOM05D006027 ORTHO05D007604 5.8e-35 151.0 117 58.1
CAN.G536.12 Capsicum annuum HOM05D006027 ORTHO05D007604 7.6e-35 150.6 106 63.2
Eucgr.K01424 Eucalyptus grandis HOM05D006027 ORTHO05D007604 1.0e-34 150.2 110 60.9
Sabra02G0194900 Salix brachista HOM05D006027 ORTHO05D007604 1.0e-34 150.2 117 59.8
Aqoxy5G00130 Aquilegia oxysepala HOM05D006027 ORTHO05D007604 1.3e-34 149.8 117 59.0
CBR_g12742 Chara braunii HOM05D006027 ORTHO05D007604 1.3e-34 149.8 111 64.0
ClCG06G001400 Citrullus lanatus HOM05D006027 ORTHO05D007604 1.3e-34 149.8 109 61.5
Gohir.A07G152700 Gossypium hirsutum HOM05D006027 ORTHO05D007604 1.3e-34 149.8 109 59.6
Gohir.D07G158900 Gossypium hirsutum HOM05D006027 ORTHO05D007604 1.3e-34 149.8 109 59.6
Cc01_g17770 Coffea canephora HOM05D006027 ORTHO05D007604 1.7e-34 149.4 113 59.3
Lalb_Chr06g0170731 Lupinus albus HOM05D006027 ORTHO05D007604 1.7e-34 149.4 109 60.6
CSS0010160 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 2.2e-34 149.1 110 60.9
TAR362G0914 Trochodendron aralioides HOM05D006027 ORTHO05D007604 2.2e-34 149.1 117 56.4
MELO3C022393.2 Cucumis melo HOM05D006027 ORTHO05D007604 2.9e-34 148.7 109 60.6
Gorai.001G182100 Gossypium raimondii HOM05D006027 ORTHO05D007604 2.9e-34 148.7 109 59.6
Lj1C74G4 Lonicera japonica HOM05D006027 ORTHO05D007604 2.9e-34 148.7 110 59.1
Medtr1g069465 Medicago truncatula HOM05D006027 ORTHO05D007604 2.9e-34 148.7 112 58.9
Nitab4.5_0000845g0140 Nicotiana tabacum HOM05D006027 ORTHO05D007604 2.9e-34 148.7 106 62.3
Nitab4.5_0002435g0010 Nicotiana tabacum HOM05D006027 ORTHO05D007604 2.9e-34 148.7 106 62.3
Oeu052083.1 Olea europaea HOM05D006027 ORTHO05D007604 2.9e-34 148.7 110 59.1
vmacro14793 Vaccinium macrocarpon HOM05D006027 ORTHO05D007604 2.9e-34 148.7 117 59.8
Aa31LG2G21720 Aethionema arabicum HOM05D006027 ORTHO05D007604 3.8e-34 148.3 117 55.6
arahy.Tifrunner.gnm1.ann1.72UZ71 Arachis hypogaea HOM05D006027 ORTHO05D007604 3.8e-34 148.3 110 60.0
arahy.Tifrunner.gnm1.ann1.FRV526 Arachis hypogaea HOM05D006027 ORTHO05D007604 3.8e-34 148.3 110 60.0
BcaC06g32609 Brassica carinata HOM05D006027 ORTHO05D007604 3.8e-34 148.3 119 54.6
Dinv43066 Davidia involucrata HOM05D006027 ORTHO05D007604 3.8e-34 148.3 110 59.1
Sed0007731 Sechium edule HOM05D006027 ORTHO05D007604 3.8e-34 148.3 106 62.3
Solyc09g064500.3 Solanum lycopersicum HOM05D006027 ORTHO05D007604 3.8e-34 148.3 112 58.9
Sopen09g025650 Solanum pennellii HOM05D006027 ORTHO05D007604 3.8e-34 148.3 106 61.3
PGSC0003DMG400008585 Solanum tuberosum HOM05D006027 ORTHO05D007604 3.8e-34 148.3 106 61.3
AagrBONN_evm.TU.Sc2ySwM_340.224 Anthoceros agrestis HOM05D006027 ORTHO05D007604 4.9e-34 147.9 108 63.0
A03p58340 Brassica napus HOM05D006027 ORTHO05D007604 4.9e-34 147.9 119 54.6
CSS0012566 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 4.9e-34 147.9 110 60.0
COL.COLO4_10205 Corchorus olitorius HOM05D006027 ORTHO05D007604 4.9e-34 147.9 107 59.8
Nn3g19801 Nelumbo nucifera HOM05D006027 ORTHO05D007604 4.9e-34 147.9 110 60.0
Phvul.001G165200 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 4.9e-34 147.9 113 57.5
TPR.G5919 Trifolium pratense HOM05D006027 ORTHO05D007604 4.9e-34 147.9 112 58.9
TWI18G0031 Tripterygium wilfordii HOM05D006027 ORTHO05D007604 4.9e-34 147.9 107 62.6
ATR0787G157 Amborella trichopoda HOM05D006027 ORTHO05D007604 6.5e-34 147.5 113 59.3
AL7G23880 Arabidopsis lyrata HOM05D006027 ORTHO05D007604 6.5e-34 147.5 119 53.8
AT4G28660 Arabidopsis thaliana HOM05D006027 ORTHO05D007604 6.5e-34 147.5 119 53.8
CDE02G4364 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 6.5e-34 147.5 110 59.1
AUR62025437 Chenopodium quinoa HOM05D006027 ORTHO05D007604 6.5e-34 147.5 106 61.3
Lalb_Chr02g0152741 Lupinus albus HOM05D006027 ORTHO05D007604 6.5e-34 147.5 109 58.7
MBI07_g08912_MAGBIO Magnolia biondii HOM05D006027 ORTHO05D007604 6.5e-34 147.5 117 56.4
Pp3c7_5450 Physcomitrium patens HOM05D006027 ORTHO05D007604 6.5e-34 147.5 114 57.0
Potri.002G256400 Populus trichocarpa HOM05D006027 ORTHO05D007604 6.5e-34 147.5 117 57.3
QL09p041558 Quercus lobata HOM05D006027 ORTHO05D007604 6.5e-34 147.5 110 60.0
Sp7g26630 Schrenkiella parvula HOM05D006027 ORTHO05D007604 6.5e-34 147.5 119 54.6
Actinidia23700 Actinidia chinensis HOM05D006027 ORTHO05D007604 8.4e-34 147.1 110 59.1
DCAR_000568 Daucus carota HOM05D006027 ORTHO05D007604 8.4e-34 147.1 107 62.6
TAR633G0397 Trochodendron aralioides HOM05D006027 ORTHO05D007604 8.4e-34 147.1 109 59.6
C07p56360 Brassica napus HOM05D006027 ORTHO05D007604 1.1e-33 146.7 119 53.8
BolC7t46115H Brassica oleracea HOM05D006027 ORTHO05D007604 1.1e-33 146.7 119 53.8
Thhalv10026347m.g Eutrema salsugineum HOM05D006027 ORTHO05D007604 1.1e-33 146.7 119 53.8
BcaNung04696 Brassica carinata HOM05D006027 ORTHO05D007604 1.4e-33 146.4 119 53.8
C01p10860 Brassica napus HOM05D006027 ORTHO05D007604 1.4e-33 146.4 119 53.8
BraA01t00872Z Brassica rapa HOM05D006027 ORTHO05D007604 1.4e-33 146.4 119 53.8
Carub.0007s1200 Capsella rubella HOM05D006027 ORTHO05D007604 1.4e-33 146.4 117 53.8
AUR62008802 Chenopodium quinoa HOM05D006027 ORTHO05D007604 1.4e-33 146.4 106 60.4
Rhsim01G0260300 Rhododendron simsii HOM05D006027 ORTHO05D007604 1.4e-33 146.4 114 58.8
EL10Ac7g17691 Beta vulgaris HOM05D006027 ORTHO05D007604 1.9e-33 146.0 106 59.4
THA.LOC104820068 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 1.9e-33 146.0 117 53.0
VMungo1383G1953 Vigna mungo HOM05D006027 ORTHO05D007604 1.9e-33 146.0 113 57.5
A01p09280 Brassica napus HOM05D006027 ORTHO05D007604 2.5e-33 145.6 119 53.8
CARHR236440 Cardamine hirsuta HOM05D006027 ORTHO05D007604 3.2e-33 145.2 117 53.0
Os01g0938100 Oryza sativa ssp. japonica HOM05D006027 ORTHO05D007604 3.2e-33 145.2 115 57.4
Peaxi162Scf00043g00255 Petunia axillaris HOM05D006027 ORTHO05D007604 3.2e-33 145.2 106 61.3
Pp3c11_18280 Physcomitrium patens HOM05D006027 ORTHO05D007604 3.2e-33 145.2 113 58.4
Psat6g062520 Pisum sativum HOM05D006027 ORTHO05D007604 3.2e-33 145.2 112 58.0
VMungo0720G1620 Vigna mungo HOM05D006027 ORTHO05D007604 3.2e-33 145.2 109 59.6
Actinidia09513 Actinidia chinensis HOM05D006027 ORTHO05D007604 4.2e-33 144.8 110 59.1
CANSAT01G0515 Cannabis sativa HOM05D006027 ORTHO05D007604 4.2e-33 144.8 117 54.7
CANSAT01G2333 Cannabis sativa HOM05D006027 ORTHO05D007604 4.2e-33 144.8 117 54.7
Glyma.10G040600 Glycine max HOM05D006027 ORTHO05D007604 5.5e-33 144.4 113 58.4
Manes.13G039500 Manihot esculenta HOM05D006027 ORTHO05D007604 5.5e-33 144.4 114 57.0
Ca_09646_v3 Cicer arietinum L. HOM05D006027 ORTHO05D007604 7.1e-33 144.1 110 58.2
ECA248G3782 Erigeron canadensis HOM05D006027 ORTHO05D007604 7.1e-33 144.1 107 61.7
Manes.12G038000 Manihot esculenta HOM05D006027 ORTHO05D007604 7.1e-33 144.1 114 56.1
PSO832G0858 Papaver somniferum HOM05D006027 ORTHO05D007604 7.1e-33 144.1 117 53.8
Phvul.007G153500 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 1.2e-32 143.3 113 56.6
Lsat_1_v5_gn_5_181161 Lactuca sativa HOM05D006027 ORTHO05D007604 1.6e-32 142.9 107 60.7
Glyma.13G127200 Glycine max HOM05D006027 ORTHO05D007604 2.1e-32 142.5 109 58.7
PSO764G0320 Papaver somniferum HOM05D006027 ORTHO05D007604 3.5e-32 141.7 117 53.0
THA.LOC104814531 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 3.5e-32 141.7 107 56.1
Cre10.g440450 Chlamydomonas reinhardtii HOM05D006027 ORTHO05D007604 4.6e-32 141.4 113 59.3
Lj5g0017558 Lotus japonicus HOM05D006027 ORTHO05D007604 4.6e-32 141.4 110 56.4
Zm00001eb141830 Zea mays HOM05D006027 ORTHO05D007604 4.6e-32 141.4 111 56.8
Zm00001eb141870 Zea mays HOM05D006027 ORTHO05D007604 4.6e-32 141.4 114 55.3
SMO347G0509 Selaginella moellendorffii HOM05D006027 ORTHO05D007604 6.0e-32 141.0 110 59.1
HanXRQChr01g0014971 Helianthus annuus HOM05D006027 ORTHO05D007604 7.9e-32 140.6 107 58.9
BolC1t01050H Brassica oleracea HOM05D000022 ORTHO05D000744 3.9e-31 138.3 110 53.6
Hund18287 Selenicereus undatus HOM05D006027 ORTHO05D007604 6.7e-31 137.5 106 57.5
HPP92_027289 Vanilla planifolia HOM05D006027 ORTHO05D007604 8.7e-31 137.1 106 55.7
Ciclev10022322m.g Citrus clementina HOM05D006027 ORTHO05D007604 1.1e-30 136.7 105 59.0
HPP92_008468 Vanilla planifolia HOM05D006027 ORTHO05D007604 9.6e-30 133.7 106 56.6
Sc05g0002880 Simmondsia chinensis HOM05D006027 ORTHO05D007604 1.6e-29 132.9 104 55.8
Ah.15g092630 Amaranthus hybridus HOM05D006027 ORTHO05D007604 1.8e-23 112.8 103 54.4
CiPaw.03G271300 Carya illinoinensis HOM05D006027 ORTHO05D007604 1.4e-20 103.2 117 44.4
Zm00001eb141750 Zea mays HOM05D006027 ORTHO05D007604 2.2e-13 79.3 55 63.6
Zm00001eb141790 Zea mays HOM05D006027 ORTHO05D007604 2.2e-13 79.3 55 63.6
CSS0017427 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 4.7e-08 61.6 100 35.0
TAR362G0025 Trochodendron aralioides HOM05D006027 ORTHO05D007604 7.9e-08 60.8 57 45.6
Zm00001eb141760 Zea mays HOM05D006027 ORTHO05D007604 2.0e-06 56.2 46 50.0


User provided reference genes

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