Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO16G326 Micromonas commoda HOM05D007297 ORTHO05D268116 1.0e-296 1022.7 538 100.0
Cre12.g554600 Chlamydomonas reinhardtii HOM05D007297 ORTHO05D009352 6.5e-09 66.6 135 28.9
Solyc10g074580.2 Solanum lycopersicum HOM05D007297 ORTHO05D009352 9.5e-08 62.8 140 30.0
PGSC0003DMG400016829 Solanum tuberosum HOM05D007297 ORTHO05D009352 9.5e-08 62.8 140 30.0
PSO170G5512 Papaver somniferum HOM05D007297 ORTHO05D009352 1.2e-07 62.4 110 31.8
Sopen10g027070 Solanum pennellii HOM05D007297 ORTHO05D009352 2.1e-07 61.6 140 30.0
RcHm_v2.0_Chr6g0281021 Rosa chinensis HOM05D007297 ORTHO05D009352 6.1e-07 60.1 84 34.5
CBR_g49409 Chara braunii HOM05D001007 ORTHO05D008005 8.0e-07 59.7 203 26.6
AUR62010181 Chenopodium quinoa HOM05D007297 ORTHO05D009352 1.0e-06 59.3 106 30.2
CARHR294010 Cardamine hirsuta HOM05D007297 ORTHO05D009352 1.4e-06 58.9 116 30.2
AUR62013182 Chenopodium quinoa HOM05D007297 ORTHO05D009352 1.4e-06 58.9 106 30.2
Nn5g31034 Nelumbo nucifera HOM05D007297 ORTHO05D009352 1.8e-06 58.5 105 31.4
Gohir.A01G011500 Gossypium hirsutum HOM05D007297 ORTHO05D009352 2.3e-06 58.2 83 33.7
MD10G1142400 Malus domestica HOM05D007297 ORTHO05D009352 2.3e-06 58.2 84 33.3
Dinv14179 Davidia involucrata HOM05D007297 ORTHO05D009352 3.0e-06 57.8 103 31.1
Manes.15G114700 Manihot esculenta HOM05D007297 ORTHO05D009352 4.0e-06 57.4 114 29.8
COL.COLO4_33139 Corchorus olitorius HOM05D007297 ORTHO05D009352 5.2e-06 57.0 103 30.1
Sp7g37510 Schrenkiella parvula HOM05D007297 ORTHO05D009352 5.2e-06 57.0 106 31.1
AT4G38225 Arabidopsis thaliana HOM05D007297 ORTHO05D009352 6.8e-06 56.6 121 29.8
Gohir.D01G012700 Gossypium hirsutum HOM05D007297 ORTHO05D009352 6.8e-06 56.6 83 32.5
Gorai.002G014500 Gossypium raimondii HOM05D007297 ORTHO05D009352 6.8e-06 56.6 83 32.5
Os03g0128800 Oryza sativa ssp. japonica HOM05D007297 ORTHO05D009352 6.8e-06 56.6 83 33.7
Pp3c17_19510 Physcomitrium patens HOM05D007297 ORTHO05D009352 6.8e-06 56.6 88 31.8
TAR381G0094 Trochodendron aralioides HOM05D007297 ORTHO05D009352 6.8e-06 56.6 100 31.0
AL7G10130 Arabidopsis lyrata HOM05D002051 ORTHO05D002041 8.8e-06 56.2 121 29.8
MD05G1140400 Malus domestica HOM05D007297 ORTHO05D009352 8.8e-06 56.2 91 33.0
MD05G1140800 Malus domestica HOM05D007297 ORTHO05D009352 8.8e-06 56.2 91 33.0
QL11p056524 Quercus lobata HOM05D007297 ORTHO05D009352 8.8e-06 56.2 133 26.3
Thecc.02G146900 Theobroma cacao HOM05D007297 ORTHO05D009352 8.8e-06 56.2 103 30.1


User provided reference genes

Program Settings