Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO16G195 Micromonas commoda HOM05D006923 ORTHO05D008697 1.1e-174 616.7 363 100.0
CDE04G0355 Ceratophyllum demersum HOM05D006923 ORTHO05D008697 5.0e-45 186.0 239 42.3
Gohir.A05G320000 Gossypium hirsutum HOM05D006923 ORTHO05D008697 5.0e-45 186.0 237 43.5
Gorai.009G345900 Gossypium raimondii HOM05D006923 ORTHO05D008697 8.5e-45 185.3 237 43.0
Gohir.D05G322300 Gossypium hirsutum HOM05D006923 ORTHO05D008697 3.2e-44 183.3 237 42.6
Actinidia24653 Actinidia chinensis HOM05D006923 ORTHO05D008697 5.5e-44 182.6 236 42.4
Cfa009080 Carpinus fangiana HOM05D006923 ORTHO05D008697 1.6e-43 181.0 247 41.3
Manes.05G093700 Manihot esculenta HOM05D006923 ORTHO05D008697 2.1e-43 180.6 234 42.3
Nn4g22963 Nelumbo nucifera HOM05D006923 ORTHO05D008697 2.1e-43 180.6 236 42.4
PSO591G0274 Papaver somniferum HOM05D006923 ORTHO05D008697 2.1e-43 180.6 248 39.1
QL03p067501 Quercus lobata HOM05D006923 ORTHO05D008697 3.6e-43 179.9 236 41.1
Rhsim12G0127000 Rhododendron simsii HOM05D006923 ORTHO05D008697 4.7e-43 179.5 236 41.1
Hund25304 Selenicereus undatus HOM05D006923 ORTHO05D008697 4.7e-43 179.5 260 39.6
Os04g0650500 Oryza sativa ssp. japonica HOM05D006923 ORTHO05D008697 6.1e-43 179.1 238 42.4
CSS0003222 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 1.4e-42 177.9 236 39.8
CSS0013336 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 1.4e-42 177.9 236 39.8
CiPaw.06G077400 Carya illinoinensis HOM05D006923 ORTHO05D008697 1.8e-42 177.6 237 43.0
CBR_g3926 Chara braunii HOM05D006923 ORTHO05D008697 1.8e-42 177.6 242 42.1
THA.LOC104819679 Tarenaya hassleriana HOM05D006923 ORTHO05D008697 1.8e-42 177.6 234 43.2
Atru.chr11.1922 Acer truncatum HOM05D006923 ORTHO05D008697 2.3e-42 177.2 235 42.1
PGR102G0681 Punica granatum HOM05D006923 ORTHO05D008697 2.3e-42 177.2 239 43.1
Aqoxy3G03167 Aquilegia oxysepala HOM05D006923 ORTHO05D008697 3.0e-42 176.8 236 40.7
ClCG05G024880 Citrullus lanatus HOM05D006923 ORTHO05D008697 3.0e-42 176.8 235 41.7
unitig_26.g10329 Utricularia gibba HOM05D006923 ORTHO05D008697 3.0e-42 176.8 244 41.0
AUR62039449 Chenopodium quinoa HOM05D006923 ORTHO05D008697 5.2e-42 176.0 248 39.1
Pp3c3_23340 Physcomitrium patens HOM05D006923 ORTHO05D008697 5.2e-42 176.0 238 41.2
Potri.008G191900 Populus trichocarpa HOM05D006923 ORTHO05D008697 5.2e-42 176.0 237 41.4
COL.COLO4_36266 Corchorus olitorius HOM05D006923 ORTHO05D008697 6.7e-42 175.6 237 42.2
Sp2g04730 Schrenkiella parvula HOM05D006923 ORTHO05D008697 6.7e-42 175.6 234 42.3
Thecc.02G238100 Theobroma cacao HOM05D006923 ORTHO05D008697 6.7e-42 175.6 235 41.7
PGSC0003DMG400001928 Solanum tuberosum HOM05D006923 ORTHO05D008697 8.8e-42 175.3 239 40.2
Cre08.g382300 Chlamydomonas reinhardtii HOM05D006923 ORTHO05D008697 1.2e-41 174.9 232 41.4
Glyma.02G026400 Glycine max HOM05D006923 ORTHO05D008697 1.2e-41 174.9 249 41.0
Carub.0002s0542 Capsella rubella HOM05D006923 ORTHO05D008697 1.5e-41 174.5 233 41.6
Ciclev10032274m.g Citrus clementina HOM05D006923 ORTHO05D008697 1.5e-41 174.5 239 42.3
Sopen04g001110 Solanum pennellii HOM05D006923 ORTHO05D008697 1.5e-41 174.5 239 40.2
GSVIVG01020133001 Vitis vinifera HOM05D006923 ORTHO05D008697 1.5e-41 174.5 241 41.1
Zm00001eb068300 Zea mays HOM05D006923 ORTHO05D008697 1.5e-41 174.5 239 40.2
AL2G16930 Arabidopsis lyrata HOM05D006923 ORTHO05D008697 2.0e-41 174.1 234 42.3
AT1G59840 Arabidopsis thaliana HOM05D006923 ORTHO05D008697 2.0e-41 174.1 236 41.9
MSTRG.649 Avicennia marina HOM05D006923 ORTHO05D008697 2.0e-41 174.1 246 42.3
BcaB04g20234 Brassica carinata HOM05D006923 ORTHO05D008697 2.0e-41 174.1 234 42.3
Cpa.g.sc5.315 Carica papaya HOM05D006923 ORTHO05D008697 2.0e-41 174.1 233 41.2
Dinv31139 Davidia involucrata HOM05D006923 ORTHO05D008697 2.0e-41 174.1 239 39.7
Aa31LG2G10350 Aethionema arabicum HOM05D006923 ORTHO05D008697 2.6e-41 173.7 233 42.5
SGA_v2.0_scaffold166G38306 Striga asiatica HOM05D006923 ORTHO05D008697 3.3e-41 173.3 238 40.8
Thhalv10023990m.g Eutrema salsugineum HOM05D006923 ORTHO05D008697 4.4e-41 172.9 234 42.3
Lj2g0018338 Lotus japonicus HOM05D006923 ORTHO05D008697 5.7e-41 172.6 249 39.8
Solyc04g005090.4 Solanum lycopersicum HOM05D006923 ORTHO05D008697 7.5e-41 172.2 239 39.7
Phvul.002G078400 Phaseolus vulgaris HOM05D006923 ORTHO05D008697 9.7e-41 171.8 249 40.2
TAR629G1985 Trochodendron aralioides HOM05D006923 ORTHO05D008697 9.7e-41 171.8 236 41.1
TPR.G26715 Trifolium pratense HOM05D006923 ORTHO05D008697 1.3e-40 171.4 244 39.8
ECA246G0266 Erigeron canadensis HOM05D000793 ORTHO05D000783 2.2e-40 170.6 252 38.5
MD13G1084200 Malus domestica HOM05D006923 ORTHO05D008697 2.2e-40 170.6 239 41.8
Migut.L01372 Erythranthe guttata HOM05D006923 ORTHO05D008697 2.8e-40 170.2 238 40.8
HanXRQChr09g0267151 Helianthus annuus HOM05D006923 ORTHO05D008697 2.8e-40 170.2 246 39.0
Lj6C798T8 Lonicera japonica HOM05D006923 ORTHO05D008697 2.8e-40 170.2 248 38.3
Ca_05074_v3 Cicer arietinum L. HOM05D006923 ORTHO05D008697 3.7e-40 169.9 239 40.6
FvH4_4g35320 Fragaria vesca HOM05D006923 ORTHO05D008697 3.7e-40 169.9 239 40.6
FAN12G2795 Fragaria x ananassa HOM05D006923 ORTHO05D008697 3.7e-40 169.9 239 40.6
RcHm_v2.0_Chr4g0444951 Rosa chinensis HOM05D006923 ORTHO05D008697 3.7e-40 169.9 239 41.4
Cc11_g13930 Coffea canephora HOM05D006923 ORTHO05D008697 4.8e-40 169.5 235 39.6
Peaxi162Scf00266g00035 Petunia axillaris HOM05D006923 ORTHO05D008697 6.3e-40 169.1 239 39.3
Aa31LG1G14870 Aethionema arabicum HOM05D006923 ORTHO05D008697 8.3e-40 168.7 241 40.7
vmacro16302 Vaccinium macrocarpon HOM05D006923 ORTHO05D008697 8.3e-40 168.7 236 41.1
Sed0028145 Sechium edule HOM05D006923 ORTHO05D008697 1.1e-39 168.3 235 39.6
CANSAT01G2170 Cannabis sativa HOM05D006923 ORTHO05D008697 2.4e-39 167.2 237 41.8
Mapoly0001s0231 Marchantia polymorpha HOM05D006923 ORTHO05D008697 2.4e-39 167.2 240 40.0
BolC1t03615H Brassica oleracea HOM05D006923 ORTHO05D008697 4.1e-39 166.4 246 41.5
FAN07G0582 Fragaria x ananassa HOM05D006923 ORTHO05D008697 4.1e-39 166.4 239 39.7
CAN.G25.5 Capsicum annuum HOM05D006923 ORTHO05D008697 5.3e-39 166.0 236 39.0
arahy.Tifrunner.gnm1.ann1.EW3DBQ Arachis hypogaea HOM05D006923 ORTHO05D008697 1.6e-38 164.5 239 41.0
C01p36540 Brassica napus HOM05D006923 ORTHO05D008697 1.6e-38 164.5 246 41.1
Lalb_Chr16g0382621 Lupinus albus HOM05D006923 ORTHO05D008697 1.6e-38 164.5 246 38.6
FAN22G1061 Fragaria x ananassa HOM05D006923 ORTHO05D008697 2.0e-38 164.1 239 39.3
Psat2g114680 Pisum sativum HOM05D006923 ORTHO05D008697 2.7e-38 163.7 241 39.8
EL10Ac6g13089 Beta vulgaris HOM05D006923 ORTHO05D008697 4.5e-38 162.9 260 36.9
BcaC09g49455 Brassica carinata HOM05D006923 ORTHO05D008697 5.9e-38 162.5 256 39.8
Sabra08G0145400 Salix brachista HOM05D006923 ORTHO05D008697 1.3e-37 161.4 224 40.2
arahy.Tifrunner.gnm1.ann1.NUE0XS Arachis hypogaea HOM05D006923 ORTHO05D008697 1.7e-37 161.0 225 42.2
HPP92_026426 Vanilla planifolia HOM05D006923 ORTHO05D008697 8.5e-37 158.7 233 36.5
SalBow2G1484 Salvia bowleyana HOM05D006923 ORTHO05D008697 1.5e-36 157.9 241 39.0
SalBow2G2758 Salvia bowleyana HOM05D006923 ORTHO05D008697 1.5e-36 157.9 241 39.0
Sc11g0001490 Simmondsia chinensis HOM05D006923 ORTHO05D008697 3.2e-36 156.8 227 40.1
BcaC06g31796 Brassica carinata HOM05D006923 ORTHO05D008697 7.2e-36 155.6 220 41.4
BcaNung06340 Brassica carinata HOM05D006923 ORTHO05D008697 7.2e-36 155.6 220 41.4
CsaV3_5G032010 Cucumis sativus L. HOM05D006923 ORTHO05D008697 1.2e-35 154.8 228 39.5
BraA01t03022Z Brassica rapa HOM05D006923 ORTHO05D008697 1.6e-35 154.5 235 39.1
Prupe.1G262600 Prunus persica HOM05D006923 ORTHO05D008697 2.1e-35 154.1 224 41.1
PRCOL_00003577 Prasinoderma coloniale HOM05D004655 ORTHO05D005567 3.6e-35 153.3 252 38.9
A01p28870 Brassica napus HOM05D006923 ORTHO05D008697 6.1e-35 152.5 220 40.0
Nitab4.5_0005168g0020 Nicotiana tabacum HOM05D006923 ORTHO05D008697 2.3e-34 150.6 238 37.8
Lsat_1_v5_gn_7_91800 Lactuca sativa HOM05D006923 ORTHO05D008697 1.2e-33 148.3 216 40.3
ATR0624G013 Amborella trichopoda HOM05D006923 ORTHO05D008697 3.7e-32 143.3 223 37.2
Haze_12112 Corylus avellana HOM05D006923 ORTHO05D008697 4.5e-30 136.3 206 36.4
CARHR053250 Cardamine hirsuta HOM05D006923 ORTHO05D008697 6.6e-29 132.5 191 37.7
AUR62026532 Chenopodium quinoa HOM05D006923 ORTHO05D008697 5.5e-28 129.4 191 39.8
TWI18G0575 Tripterygium wilfordii HOM05D006923 ORTHO05D008697 7.2e-28 129.0 235 35.7
MELO3C012038.2 Cucumis melo HOM05D006923 ORTHO05D008697 1.4e-26 124.8 200 38.0
Medtr5g037050 Medicago truncatula HOM05D006923 ORTHO05D008697 2.3e-26 124.0 209 37.8
VMungo1215G1603 Vigna mungo HOM05D006923 ORTHO05D008697 2.0e-25 120.9 196 39.3
Duzib268G0289 Durio zibethinus HOM05D006923 ORTHO05D008697 1.8e-23 114.4 235 32.3
FAN17G2763 Fragaria x ananassa HOM05D006923 ORTHO05D008697 2.3e-18 97.4 137 37.2
MBI17_g35870_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 3.1e-18 97.1 135 35.6
PSO832G3782 Papaver somniferum HOM05D006923 ORTHO05D008697 2.0e-14 84.3 93 44.1
AagrBONN_evm.TU.Sc2ySwM_117.4092 Anthoceros agrestis HOM05D006923 ORTHO05D008697 7.8e-14 82.4 131 39.7
Sed0022420 Sechium edule HOM05D006923 ORTHO05D008697 2.1e-06 57.8 129 30.2
SEGI_22816 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 7.8e-06 55.8 98 31.6


User provided reference genes

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