Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO16G171 Micromonas commoda HOM05D007079 ORTHO05D009006 1.3e-172 609.8 340 100.0
Pp3c24_15610 Physcomitrium patens HOM05D007079 ORTHO05D009006 7.5e-43 178.7 221 43.0
AagrBONN_evm.TU.Sc2ySwM_344.2117 Anthoceros agrestis HOM05D007079 ORTHO05D009006 8.3e-42 175.3 242 43.0
Cre14.g628500 Chlamydomonas reinhardtii HOM05D007079 ORTHO05D009006 1.2e-40 171.4 230 44.8
SMO266G0019 Selaginella moellendorffii HOM05D007079 ORTHO05D009006 1.1e-38 164.9 217 45.2
Mapoly0043s0142 Marchantia polymorpha HOM05D007079 ORTHO05D009006 3.0e-36 156.8 260 40.4
CBR_g1049 Chara braunii HOM05D007079 ORTHO05D009006 4.0e-36 156.4 233 39.9
Nn5g29708 Nelumbo nucifera HOM05D007079 ORTHO05D009006 2.0e-32 144.1 216 38.4
Ciclev10003294m.g Citrus clementina HOM05D007079 ORTHO05D009006 7.7e-32 142.1 256 35.5
AUR62014482 Chenopodium quinoa HOM05D007079 ORTHO05D009006 1.3e-31 141.4 216 37.5
Cc07_g05190 Coffea canephora HOM05D007079 ORTHO05D009006 2.9e-31 140.2 215 38.1
AL1G32410 Arabidopsis lyrata HOM05D007079 ORTHO05D009006 8.6e-31 138.7 230 39.6
Sc02g0005670 Simmondsia chinensis HOM05D007079 ORTHO05D009006 8.6e-31 138.7 217 36.9
Cfa013875 Carpinus fangiana HOM05D007079 ORTHO05D009006 1.1e-30 138.3 282 35.1
Migut.K00854 Erythranthe guttata HOM05D007079 ORTHO05D009006 1.1e-30 138.3 226 37.2
Ah.05g180850 Amaranthus hybridus HOM05D007079 ORTHO05D009006 1.5e-30 137.9 229 37.6
AT1G19690 Arabidopsis thaliana HOM05D007079 ORTHO05D009006 1.9e-30 137.5 225 39.6
QL02p009607 Quercus lobata HOM05D007079 ORTHO05D009006 1.9e-30 137.5 232 38.4
CsaV3_2G029020 Cucumis sativus L. HOM05D007079 ORTHO05D009006 2.5e-30 137.1 213 38.0
MELO3C010968.2 Cucumis melo HOM05D007079 ORTHO05D009006 4.3e-30 136.3 273 35.5
TAR376G0129 Trochodendron aralioides HOM05D007079 ORTHO05D009006 4.3e-30 136.3 215 39.5
TWI56G1128 Tripterygium wilfordii HOM05D007079 ORTHO05D009006 5.6e-30 136.0 216 38.4
Aa31LG7G4270 Aethionema arabicum HOM05D007079 ORTHO05D009006 7.2e-30 135.6 229 38.0
ECA238G0935 Erigeron canadensis HOM05D007079 ORTHO05D009006 7.2e-30 135.6 214 39.3
BcaB07g31982 Brassica carinata HOM05D007079 ORTHO05D009006 9.5e-30 135.2 214 38.8
HanXRQChr09g0264171 Helianthus annuus HOM05D007079 ORTHO05D009006 9.5e-30 135.2 224 37.9
CAN.G836.5 Capsicum annuum HOM05D007079 ORTHO05D009006 1.2e-29 134.8 214 38.3
Sp1g17520 Schrenkiella parvula HOM05D007079 ORTHO05D009006 2.1e-29 134.0 239 37.7
THA.LOC104813812 Tarenaya hassleriana HOM05D007079 ORTHO05D009006 2.1e-29 134.0 226 38.1
Lsat_1_v5_gn_2_87400 Lactuca sativa HOM05D007079 ORTHO05D009006 2.8e-29 133.7 223 38.1
PGSC0003DMG400010042 Solanum tuberosum HOM05D007079 ORTHO05D009006 4.7e-29 132.9 240 36.7
A06p15810 Brassica napus HOM05D007079 ORTHO05D009006 6.1e-29 132.5 259 36.3
BraA06t24691Z Brassica rapa HOM05D007079 ORTHO05D009006 6.1e-29 132.5 222 38.3
Potri.002G031500 Populus trichocarpa HOM05D007079 ORTHO05D009006 6.1e-29 132.5 216 36.6
Zm00001eb128420 Zea mays HOM05D007079 ORTHO05D009006 6.1e-29 132.5 235 36.2
BolC5t30520H Brassica oleracea HOM05D007079 ORTHO05D009006 8.0e-29 132.1 215 38.6
Carub.0001s1923 Capsella rubella HOM05D007079 ORTHO05D009006 8.0e-29 132.1 224 38.4
CiPaw.07G156900 Carya illinoinensis HOM05D007079 ORTHO05D009006 8.0e-29 132.1 229 38.4
FvH4_2g39320 Fragaria vesca HOM05D007079 ORTHO05D009006 1.0e-28 131.7 225 39.6
Sabra02G0025400 Salix brachista HOM05D007079 ORTHO05D009006 1.0e-28 131.7 264 34.8
Thhalv10008056m.g Eutrema salsugineum HOM05D007079 ORTHO05D009006 3.0e-28 130.2 216 38.9
Sopen02g034590 Solanum pennellii HOM05D007079 ORTHO05D009006 4.0e-28 129.8 240 36.2
MSTRG.15412 Avicennia marina HOM05D007079 ORTHO05D009006 5.2e-28 129.4 220 35.9
C05p18130 Brassica napus HOM05D007079 ORTHO05D009006 5.2e-28 129.4 215 38.6
Phvul.001G011600 Phaseolus vulgaris HOM05D007079 ORTHO05D009006 5.2e-28 129.4 231 36.4
Hma1.2p1_0469F.1_g158910 Hydrangea macrophylla HOM05D007079 ORTHO05D009006 6.8e-28 129.0 215 37.2
Prupe.1G374300 Prunus persica HOM05D007079 ORTHO05D009006 6.8e-28 129.0 221 38.0
Solyc02g089890.4 Solanum lycopersicum HOM05D002466 ORTHO05D009006 6.8e-28 129.0 240 36.2
Aqoxy6G01196 Aquilegia oxysepala HOM05D007079 ORTHO05D009006 1.2e-27 128.3 216 38.4
Medtr1g022940 Medicago truncatula HOM05D007079 ORTHO05D009006 2.0e-27 127.5 234 34.6
Haze_22555 Corylus avellana HOM05D007079 ORTHO05D009006 2.6e-27 127.1 298 33.6
VMungo0647G1101 Vigna mungo HOM05D007079 ORTHO05D009006 2.6e-27 127.1 214 36.4
Duzib093G0231 Durio zibethinus HOM05D007079 ORTHO05D009006 3.4e-27 126.7 214 35.5
Eucgr.F01861 Eucalyptus grandis HOM05D007079 ORTHO05D009006 3.4e-27 126.7 255 34.5
Hund26893 Selenicereus undatus HOM05D007079 ORTHO05D009006 3.4e-27 126.7 216 34.7
Glyma.17G253400 Glycine max HOM05D007079 ORTHO05D009006 4.4e-27 126.3 216 36.1
SalBow1G2109 Salvia bowleyana HOM05D007079 ORTHO05D009006 4.4e-27 126.3 217 35.0
MD08G1024600 Malus domestica HOM05D007079 ORTHO05D009006 7.5e-27 125.6 237 37.6
RcHm_v2.0_Chr6g0301681 Rosa chinensis HOM05D007079 ORTHO05D009006 7.5e-27 125.6 216 38.0
MBI16_g23831_MAGBIO Magnolia biondii HOM05D007079 ORTHO05D009006 1.3e-26 124.8 217 36.9
Glyma.14G071200 Glycine max HOM05D007079 ORTHO05D009006 1.7e-26 124.4 222 35.6
PGR031G2472 Punica granatum HOM05D007079 ORTHO05D009006 1.7e-26 124.4 216 34.3
Sed0004812 Sechium edule HOM05D007079 ORTHO05D009006 2.9e-26 123.6 219 35.2
TPR.G30477 Trifolium pratense HOM05D007079 ORTHO05D009006 3.7e-26 123.2 245 34.3
GSVIVG01009772001 Vitis vinifera HOM05D007079 ORTHO05D009006 3.7e-26 123.2 240 35.4
Oeu032890.1 Olea europaea HOM05D007079 ORTHO05D009006 4.9e-26 122.9 216 36.1
Ca_13380_v3 Cicer arietinum L. HOM05D007079 ORTHO05D009006 6.4e-26 122.5 234 34.2
ATR1158G010 Amborella trichopoda HOM05D007079 ORTHO05D009006 1.1e-25 121.7 214 36.0
Lj5g0022889 Lotus japonicus HOM05D007079 ORTHO05D009006 1.1e-25 121.7 231 34.2
Lalb_Chr22g0354571 Lupinus albus HOM05D007079 ORTHO05D009006 1.1e-25 121.7 217 34.6
Lj4A133T11 Lonicera japonica HOM05D007079 ORTHO05D009006 1.4e-25 121.3 213 36.2
Gohir.D05G259900 Gossypium hirsutum HOM05D007079 ORTHO05D009006 2.4e-25 120.6 215 35.3
Thecc.08G033400 Theobroma cacao HOM05D007079 ORTHO05D009006 2.4e-25 120.6 215 35.3
CSS0042333 Camellia sinensis var. sinensis HOM05D007079 ORTHO05D009006 3.2e-25 120.2 222 36.9
Gohir.A05G258332 Gossypium hirsutum HOM05D007079 ORTHO05D009006 3.2e-25 120.2 215 35.3
COL.COLO4_26243 Corchorus olitorius HOM05D007079 ORTHO05D009006 4.1e-25 119.8 215 34.9
Gorai.009G271700 Gossypium raimondii HOM05D007079 ORTHO05D009006 4.1e-25 119.8 215 34.9
Actinidia15361 Actinidia chinensis HOM05D007079 ORTHO05D009006 5.4e-25 119.4 236 36.0
Ca_30048_v3 Cicer arietinum L. HOM05D007079 ORTHO05D009006 7.0e-25 119.0 216 35.2
Atru.chr13.409 Acer truncatum HOM05D007079 ORTHO05D009006 1.2e-24 118.2 268 32.5
ClCG08G014740 Citrullus lanatus HOM05D007079 ORTHO05D009006 2.7e-24 117.1 239 32.6
CARHR020210 Cardamine hirsuta HOM05D007079 ORTHO05D009006 3.5e-24 116.7 191 39.3
PSO675G2324 Papaver somniferum HOM05D007079 ORTHO05D009006 4.6e-24 116.3 211 34.6
Nitab4.5_0002108g0010 Nicotiana tabacum HOM05D002466 ORTHO05D002668 1.7e-23 114.4 214 33.6
Rhsim06G0028600 Rhododendron simsii HOM05D007079 ORTHO05D009006 1.7e-23 114.4 216 36.1
SGA_v2.0_scaffold34G13653 Striga asiatica HOM05D007079 ORTHO05D009006 2.3e-23 114.0 217 33.6
arahy.Tifrunner.gnm1.ann1.1TI5B0 Arachis hypogaea HOM05D007079 ORTHO05D009006 3.0e-23 113.6 256 33.2
PSO541G3287 Papaver somniferum HOM05D007079 ORTHO05D009006 3.9e-23 113.2 211 34.1
Manes.05G155100 Manihot esculenta HOM05D007079 ORTHO05D009006 5.6e-22 109.4 192 37.0
Psat6g009680 Pisum sativum HOM05D007079 ORTHO05D009006 3.6e-21 106.7 279 30.8
CDE05G2112 Ceratophyllum demersum HOM05D007079 ORTHO05D009006 4.7e-21 106.3 215 32.6
FAN26G1347 Fragaria x ananassa HOM05D007079 ORTHO05D009006 8.0e-21 105.5 155 43.2
FAN15G1571 Fragaria x ananassa HOM05D007079 ORTHO05D009006 1.0e-20 105.1 155 43.2
FAN27G2216 Fragaria x ananassa HOM05D007079 ORTHO05D009006 1.0e-20 105.1 155 42.6
Nitab4.5_0005754g0040 Nicotiana tabacum HOM05D007079 ORTHO05D009006 4.0e-20 103.2 170 38.2
Dinv39455 Davidia involucrata HOM05D007079 ORTHO05D009006 8.9e-20 102.1 148 43.9
CANSAT78G0946 Cannabis sativa HOM05D007079 ORTHO05D009006 1.2e-19 101.7 189 35.4
Peaxi162Scf00535g00126 Petunia axillaris HOM05D007079 ORTHO05D009006 1.7e-18 97.8 155 40.0
vmacro21681 Vaccinium macrocarpon HOM05D007079 ORTHO05D009006 1.7e-18 97.8 240 31.7
EL10Ac1g00614 Beta vulgaris HOM05D007079 ORTHO05D009006 7.0e-17 92.4 266 28.6
DCAR_026263 Daucus carota HOM05D007079 ORTHO05D009006 1.2e-16 91.7 223 32.3
PRCOL_00000559 Prasinoderma coloniale HOM05D007079 ORTHO05D009006 1.6e-16 91.3 161 39.1
arahy.Tifrunner.gnm1.ann1.GTY6RX Arachis hypogaea HOM05D007079 ORTHO05D009006 4.6e-16 89.7 148 39.2
Cpa.g.sc2827.1 Carica papaya HOM05D007079 ORTHO05D009006 6.0e-16 89.4 150 38.7
SEGI_21203 Sequoiadendron giganteum HOM05D007079 ORTHO05D009006 2.3e-15 87.4 131 35.1
SEGI_24775 Sequoiadendron giganteum HOM05D007079 ORTHO05D009006 1.5e-14 84.7 105 41.0
Hma1.2p1_0469F.1_g158920 Hydrangea macrophylla HOM05D007079 ORTHO05D009006 4.7e-13 79.7 102 43.1
arahy.Tifrunner.gnm1.ann1.6FY89R Arachis hypogaea HOM05D000259 ORTHO05D000155 3.2e-09 67.0 189 30.2
AUR62034519 Chenopodium quinoa HOM05D007079 ORTHO05D009006 1.7e-07 61.2 62 48.4


User provided reference genes

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