Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO15G710 Micromonas commoda HOM05D007175 ORTHO05D009032 0.0e+00 1082.4 573 100.0
Aa31LG9G12520 Aethionema arabicum HOM05D007175 ORTHO05D009032 6.4e-47 193.0 385 33.8
arahy.Tifrunner.gnm1.ann1.BW2M8B Arachis hypogaea HOM05D000005 ORTHO05D009032 1.1e-46 192.2 401 32.4
RcHm_v2.0_Chr7g0217631 Rosa chinensis HOM05D007175 ORTHO05D009032 1.1e-46 192.2 396 33.6
arahy.Tifrunner.gnm1.ann1.YTK8KP Arachis hypogaea HOM05D007175 ORTHO05D009032 1.9e-46 191.4 361 34.1
THA.LOC104801648 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 2.5e-46 191.0 388 33.5
DCAR_013353 Daucus carota HOM05D007175 ORTHO05D009032 5.5e-46 189.9 365 35.3
Psat2g024960 Pisum sativum HOM05D007175 ORTHO05D009032 5.5e-46 189.9 403 32.0
FAN04G1040 Fragaria x ananassa HOM05D007175 ORTHO05D009032 7.1e-46 189.5 385 34.0
Oeu000737.1 Olea europaea HOM05D007175 ORTHO05D009032 1.2e-45 188.7 348 34.8
THA.LOC104806865 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 1.2e-45 188.7 398 34.4
CARHR285020 Cardamine hirsuta HOM05D007175 ORTHO05D009032 1.6e-45 188.3 388 33.0
Thecc.08G097400 Theobroma cacao HOM05D007175 ORTHO05D009032 1.6e-45 188.3 395 34.4
AL8G19150 Arabidopsis lyrata HOM05D007175 ORTHO05D009032 2.1e-45 188.0 388 31.7
Atru.chr13.18 Acer truncatum HOM05D007175 ORTHO05D009032 2.7e-45 187.6 387 33.3
Zm00001eb245810 Zea mays HOM05D007175 ORTHO05D009032 2.7e-45 187.6 360 36.1
FAN08G3457 Fragaria x ananassa HOM05D007175 ORTHO05D009032 3.5e-45 187.2 385 34.0
FAN13G2687 Fragaria x ananassa HOM05D007175 ORTHO05D009032 3.5e-45 187.2 385 33.8
Glyma.14G047400 Glycine max HOM05D007175 ORTHO05D009032 3.5e-45 187.2 399 32.3
COL.COLO4_12263 Corchorus olitorius HOM05D007175 ORTHO05D009032 4.6e-45 186.8 385 33.2
Gorai.002G111700 Gossypium raimondii HOM05D007175 ORTHO05D009032 4.6e-45 186.8 394 34.3
Nn5g31081 Nelumbo nucifera HOM05D007175 ORTHO05D009032 6.0e-45 186.4 383 33.9
Aqoxy5G03363 Aquilegia oxysepala HOM05D007175 ORTHO05D009032 7.9e-45 186.0 385 32.2
Lsat_1_v5_gn_2_2721 Lactuca sativa HOM05D007175 ORTHO05D009032 7.9e-45 186.0 386 33.2
LjContig00564g0015126 Lotus japonicus HOM05D007175 ORTHO05D009032 7.9e-45 186.0 399 32.1
Eucgr.F03631 Eucalyptus grandis HOM05D007175 ORTHO05D009032 1.0e-44 185.7 387 32.8
Sed0015844 Sechium edule HOM05D007175 ORTHO05D009032 1.8e-44 184.9 386 34.7
TPR.G14442 Trifolium pratense HOM05D007175 ORTHO05D009032 1.8e-44 184.9 364 33.8
BolC9t55392H Brassica oleracea HOM05D007175 ORTHO05D009032 2.3e-44 184.5 386 33.4
ECA238G4354 Erigeron canadensis HOM05D007175 ORTHO05D009032 2.3e-44 184.5 352 34.1
Glyma.02G269500 Glycine max HOM05D007175 ORTHO05D009032 3.0e-44 184.1 385 32.5
Gohir.D01G086300 Gossypium hirsutum HOM05D007175 ORTHO05D009032 3.0e-44 184.1 394 34.3
PSO782G3151 Papaver somniferum HOM05D007175 ORTHO05D009032 3.9e-44 183.7 386 33.2
Rhsim07G0258300 Rhododendron simsii HOM05D007175 ORTHO05D009032 5.1e-44 183.3 350 35.1
Cc10_g00080 Coffea canephora HOM05D007175 ORTHO05D009032 6.7e-44 183.0 351 34.8
Lalb_Chr17g0347321 Lupinus albus HOM05D007175 ORTHO05D009032 6.7e-44 183.0 396 33.1
Medtr5g085780 Medicago truncatula HOM05D007175 ORTHO05D009032 6.7e-44 183.0 350 34.3
PSO063G3513 Papaver somniferum HOM05D007175 ORTHO05D009032 6.7e-44 183.0 386 32.6
A09p19640 Brassica napus HOM05D007175 ORTHO05D009032 8.7e-44 182.6 386 33.2
Thhalv10003204m.g Eutrema salsugineum HOM05D007175 ORTHO05D009032 8.7e-44 182.6 388 32.7
AT5G42370 Arabidopsis thaliana HOM05D007175 ORTHO05D009032 1.1e-43 182.2 350 32.6
Ca_06102_v3 Cicer arietinum L. HOM05D007175 ORTHO05D009032 1.1e-43 182.2 363 33.1
Duzib116G0712 Durio zibethinus HOM05D007175 ORTHO05D009032 1.1e-43 182.2 385 34.8
Prupe.5G000900 Prunus persica HOM05D007175 ORTHO05D009032 1.1e-43 182.2 400 33.8
VMungo0647G1837 Vigna mungo HOM05D007175 ORTHO05D009032 1.1e-43 182.2 400 32.0
BcaC04g21999 Brassica carinata HOM05D007175 ORTHO05D009032 1.5e-43 181.8 386 32.9
C09p25000 Brassica napus HOM05D007175 ORTHO05D009032 1.5e-43 181.8 386 32.9
Lalb_Chr10g0105651 Lupinus albus HOM05D007175 ORTHO05D009032 1.9e-43 181.4 393 32.3
BcaB07g31081 Brassica carinata HOM05D007175 ORTHO05D009032 2.5e-43 181.0 386 33.2
Cpa.g.sc36.96 Carica papaya HOM05D007175 ORTHO05D009032 3.3e-43 180.6 385 33.0
CiPaw.07G130000 Carya illinoinensis HOM05D007175 ORTHO05D009032 4.3e-43 180.3 340 35.3
AUR62035193 Chenopodium quinoa HOM05D007175 ORTHO05D009032 5.6e-43 179.9 387 31.0
Os02g0592200 Oryza sativa ssp. japonica HOM05D007175 ORTHO05D009032 5.6e-43 179.9 340 35.0
CBR_g4433 Chara braunii HOM05D007175 ORTHO05D009032 7.4e-43 179.5 387 32.6
SMO259G0040 Selaginella moellendorffii HOM05D007175 ORTHO05D009032 9.6e-43 179.1 352 33.5
Ah.14g086450 Amaranthus hybridus HOM05D007175 ORTHO05D009032 1.3e-42 178.7 346 32.9
Dinv30325 Davidia involucrata HOM05D007175 ORTHO05D009032 1.3e-42 178.7 337 35.0
TWI36G1138 Tripterygium wilfordii HOM05D007175 ORTHO05D009032 1.3e-42 178.7 350 33.7
PRCOL_00006786 Prasinoderma coloniale HOM05D007175 ORTHO05D009032 2.1e-42 177.9 342 34.8
GSVIVG01013462001 Vitis vinifera HOM05D007175 ORTHO05D009032 2.1e-42 177.9 386 32.9
ClCG11G019270 Citrullus lanatus HOM05D007175 ORTHO05D009032 2.8e-42 177.6 387 33.3
CsaV3_4G037860 Cucumis sativus L. HOM05D007175 ORTHO05D009032 3.7e-42 177.2 387 33.1
BraA09t37575Z Brassica rapa HOM05D007175 ORTHO05D009032 4.8e-42 176.8 351 33.9
Cfa014168 Carpinus fangiana HOM05D007175 ORTHO05D009032 4.8e-42 176.8 337 34.7
HanXRQChr14g0427501 Helianthus annuus HOM05D007175 ORTHO05D009032 4.8e-42 176.8 350 33.7
Mapoly0013s0050 Marchantia polymorpha HOM05D007175 ORTHO05D009032 4.8e-42 176.8 388 30.9
Haze_22891 Corylus avellana HOM05D007175 ORTHO05D009032 1.1e-41 175.6 346 34.1
BcaNung05249 Brassica carinata HOM05D007175 ORTHO05D009032 1.8e-41 174.9 369 33.6
AUR62042532 Chenopodium quinoa HOM05D007175 ORTHO05D009032 1.8e-41 174.9 352 32.4
MELO3C017080.2 Cucumis melo HOM05D007175 ORTHO05D009032 1.8e-41 174.9 350 34.0
Actinidia37900 Actinidia chinensis HOM05D007175 ORTHO05D009032 2.4e-41 174.5 350 34.0
Ciclev10003552m.g Citrus clementina HOM05D007175 ORTHO05D009032 4.0e-41 173.7 336 35.4
CAN.G1330.33 Capsicum annuum HOM05D007175 ORTHO05D009032 5.3e-41 173.3 383 32.4
Pp3c5_8650 Physcomitrium patens HOM05D007175 ORTHO05D009032 6.9e-41 172.9 391 31.5
QL02p016318 Quercus lobata HOM05D007175 ORTHO05D009032 9.0e-41 172.6 350 34.0
AagrBONN_evm.TU.Sc2ySwM_117.3655 Anthoceros agrestis HOM05D007175 ORTHO05D009032 1.2e-40 172.2 352 32.4
Sabra05G0201000 Salix brachista HOM05D007175 ORTHO05D009032 2.2e-39 167.9 340 32.1
ATR0605G370 Amborella trichopoda HOM05D007175 ORTHO05D009032 6.5e-39 166.4 350 32.6
EL10Ac1g01857 Beta vulgaris HOM05D007175 ORTHO05D009032 8.4e-39 166.0 391 31.2
HPP92_018876 Vanilla planifolia HOM05D007175 ORTHO05D009032 4.6e-37 160.2 381 29.9
FvH4_5g26760 Fragaria vesca HOM05D007175 ORTHO05D009032 2.3e-36 157.9 316 34.8
TAR376G0324 Trochodendron aralioides HOM05D007175 ORTHO05D009032 1.5e-35 155.2 314 34.1
Sp7g08160 Schrenkiella parvula HOM05D007175 ORTHO05D009032 2.8e-34 151.0 298 33.9
HPP92_018864 Vanilla planifolia HOM05D007175 ORTHO05D009032 2.8e-34 151.0 279 33.7
Carub.0008s0679 Capsella rubella HOM05D007175 ORTHO05D009032 1.4e-33 148.7 296 33.1
Phvul.008G212600 Phaseolus vulgaris HOM05D007175 ORTHO05D009032 1.4e-33 148.7 314 32.2
Gohir.A01G101333 Gossypium hirsutum HOM05D007175 ORTHO05D009032 1.8e-33 148.3 394 30.5
Potri.005G259700 Populus trichocarpa HOM05D007175 ORTHO05D009032 1.8e-33 148.3 370 30.0
FAN18G0319 Fragaria x ananassa HOM05D007175 ORTHO05D009032 1.5e-32 145.2 192 40.1
Lj4A814G51 Lonicera japonica HOM05D007175 ORTHO05D009032 6.5e-31 139.8 267 36.0
CSS0024225 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.4e-30 138.7 189 40.2
PSO063G1612 Papaver somniferum HOM05D007175 ORTHO05D009032 3.2e-30 137.5 192 37.0
Manes.18G000500 Manihot esculenta HOM05D007175 ORTHO05D009032 5.1e-28 130.2 262 33.2
CANSAT25G0321 Cannabis sativa HOM05D007175 ORTHO05D009032 6.7e-28 129.8 192 39.6
CSS0000573 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 7.4e-27 126.3 160 40.6
CSS0003113 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 7.4e-27 126.3 160 40.6
CSS0005819 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 2.8e-26 124.4 160 40.0
Peaxi162Scf00385g01230 Petunia axillaris HOM05D007175 ORTHO05D009032 5.3e-25 120.2 147 42.2
CSS0005025 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 5.1e-20 103.6 104 48.1
CSS0026468 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 5.1e-20 103.6 104 48.1
LjContig00564g0013673 Lotus japonicus HOM05D007175 ORTHO05D009032 2.6e-16 91.3 190 32.6
SEGI_21773 Sequoiadendron giganteum HOM05D007175 ORTHO05D009032 7.4e-11 73.2 55 58.2
Pp3c27_7660 Physcomitrium patens HOM05D019562 ORTHO05D021280 1.7e-10 72.0 215 30.7
AagrBONN_evm.TU.Sc2ySwM_117.1015 Anthoceros agrestis HOM05D019562 ORTHO05D021280 6.3e-10 70.1 195 28.7
CBR_g24078 Chara braunii HOM05D019562 ORTHO05D021280 8.5e-07 59.7 202 27.7
Hma1.2p1_0810F.1_g221930 Hydrangea macrophylla HOM05D007175 ORTHO05D009032 4.2e-06 57.4 118 35.6
Mapoly0091s0011 Marchantia polymorpha HOM05D019562 ORTHO05D021280 4.2e-06 57.4 79 38.0


User provided reference genes

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