Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO15G679 Micromonas commoda HOM05D014140 ORTHO05D015854 2.5e-192 675.2 333 100.0
SEGI_17728 Sequoiadendron giganteum HOM05D014140 ORTHO05D015854 5.4e-22 109.4 338 29.6
MCO10G074 Micromonas commoda HOM05D014140 ORTHO05D015854 1.0e-20 105.1 364 29.1
Mapoly0019s0025 Marchantia polymorpha HOM05D014140 ORTHO05D015854 3.9e-20 103.2 299 28.1
MCO09G571 Micromonas commoda HOM05D014140 ORTHO05D015854 1.0e-12 78.6 267 28.5
SMO364G0506 Selaginella moellendorffii HOM05D005677 ORTHO05D006966 2.5e-11 73.9 155 34.2
MD06G1042700 Malus domestica HOM05D001602 ORTHO05D001470 7.4e-11 72.4 242 30.2
Thecc.03G235700 Theobroma cacao HOM05D001602 ORTHO05D001470 7.4e-11 72.4 197 33.5
QL12p007555 Quercus lobata HOM05D001602 ORTHO05D001470 9.6e-11 72.0 245 29.4
Nn1g00671 Nelumbo nucifera HOM05D001602 ORTHO05D001470 8.2e-10 68.9 207 30.9
Haze_08317 Corylus avellana HOM05D001602 ORTHO05D001470 1.1e-09 68.6 199 32.2
Cfa012366 Carpinus fangiana HOM05D001602 ORTHO05D001470 1.4e-09 68.2 208 32.2
PRCOL_00001105 Prasinoderma coloniale HOM05D014140 ORTHO05D015854 1.4e-09 68.2 322 26.4
PRCOL_00004222 Prasinoderma coloniale HOM05D014140 ORTHO05D015854 1.8e-09 67.8 176 26.7
AagrBONN_evm.TU.Sc2ySwM_344.5185 Anthoceros agrestis HOM05D006908 ORTHO05D008662 4.1e-09 66.6 162 34.0
Gohir.A08G160600 Gossypium hirsutum HOM05D001602 ORTHO05D001470 4.1e-09 66.6 199 28.6
Cre01.g014100 Chlamydomonas reinhardtii HOM05D014140 ORTHO05D015854 5.3e-09 66.2 199 28.1
Gorai.004G189800 Gossypium raimondii HOM05D001602 ORTHO05D001470 5.3e-09 66.2 199 29.1
MCO11G410 Micromonas commoda HOM05D016594 ORTHO05D018380 9.0e-09 65.5 151 34.4
Pp3c1_38340 Physcomitrium patens HOM05D005677 ORTHO05D006966 1.2e-08 65.1 162 35.8
Aqoxy3G02562 Aquilegia oxysepala HOM05D001602 ORTHO05D001470 2.0e-08 64.3 198 27.8
Gohir.D08G180900 Gossypium hirsutum HOM05D001602 ORTHO05D001470 2.0e-08 64.3 199 28.6
HanXRQChr02g0032801 Helianthus annuus HOM05D006908 ORTHO05D008662 4.5e-08 63.2 161 31.7
Rhsim07G0121000 Rhododendron simsii HOM05D001602 ORTHO05D001470 5.8e-08 62.8 196 28.1
Phvul.005G170700 Phaseolus vulgaris HOM05D006908 ORTHO05D008662 7.6e-08 62.4 196 27.6
CBR_g20274 Chara braunii HOM05D006908 ORTHO05D008662 1.3e-07 61.6 197 28.4
FvH4_6g31280 Fragaria vesca HOM05D006908 ORTHO05D008662 1.3e-07 61.6 162 30.2
FAN05G1986 Fragaria x ananassa HOM05D006908 ORTHO05D008662 1.3e-07 61.6 187 28.3
PGR042G0660 Punica granatum HOM05D001602 ORTHO05D001470 1.7e-07 61.2 111 37.8
Duzib068G0907 Durio zibethinus HOM05D001602 ORTHO05D001470 2.9e-07 60.5 225 27.6
Ciclev10033731m.g Citrus clementina HOM05D001602 ORTHO05D001470 5.0e-07 59.7 249 27.7
VMungo1080G1808 Vigna mungo HOM05D006908 ORTHO05D008662 5.0e-07 59.7 162 29.6
Lalb_Chr22g0351301 Lupinus albus HOM05D006908 ORTHO05D008662 6.5e-07 59.3 163 30.7
Potri.001G148200 Populus trichocarpa HOM05D001602 ORTHO05D001470 6.5e-07 59.3 195 30.8
TAR374G1398 Trochodendron aralioides HOM05D001602 ORTHO05D001470 6.5e-07 59.3 218 29.4
GSVIVG01013248001 Vitis vinifera HOM05D001602 ORTHO05D001470 6.5e-07 59.3 117 34.2
AagrBONN_evm.TU.Sc2ySwM_344.5132 Anthoceros agrestis HOM05D014140 ORTHO05D015854 8.4e-07 58.9 236 26.7
Lj2P248T46 Lonicera japonica HOM05D001602 ORTHO05D001470 8.4e-07 58.9 207 29.0
MCO09G596 Micromonas commoda HOM05D002956 ORTHO05D008031 8.4e-07 58.9 197 25.9
SalBow5G4467 Salvia bowleyana HOM05D005677 ORTHO05D006966 8.4e-07 58.9 188 30.9
TWI81G0159 Tripterygium wilfordii HOM05D001602 ORTHO05D001470 8.4e-07 58.9 205 29.8
PGSC0003DMG400005687 Solanum tuberosum HOM05D006908 ORTHO05D008662 1.1e-06 58.5 158 31.0
CAN.G438.72 Capsicum annuum HOM05D006908 ORTHO05D008662 1.4e-06 58.2 161 30.4
MELO3C012958.2 Cucumis melo HOM05D006908 ORTHO05D008662 1.4e-06 58.2 162 29.0
PSO782G4818 Papaver somniferum HOM05D006908 ORTHO05D008662 1.4e-06 58.2 163 29.4
Sp5g35850 Schrenkiella parvula HOM05D006908 ORTHO05D008662 1.4e-06 58.2 158 29.7
FvH4_3g28160 Fragaria vesca HOM05D002956 ORTHO05D008031 1.9e-06 57.8 160 30.0
Glyma.15G014900 Glycine max HOM05D006908 ORTHO05D008662 1.9e-06 57.8 192 27.6
COL.COLO4_17122 Corchorus olitorius HOM05D001602 ORTHO05D001470 2.5e-06 57.4 117 36.8
Lj3g0017668 Lotus japonicus HOM05D006908 ORTHO05D008662 2.5e-06 57.4 162 29.0
Manes.11G045900 Manihot esculenta HOM05D006908 ORTHO05D008662 3.2e-06 57.0 161 28.6
Oeu042263.1 Olea europaea HOM05D005677 ORTHO05D006966 3.2e-06 57.0 155 31.0
RcHm_v2.0_Chr2g0138011 Rosa chinensis HOM05D006908 ORTHO05D008662 3.2e-06 57.0 162 31.5
Sopen03g039000 Solanum pennellii HOM05D006908 ORTHO05D008662 3.2e-06 57.0 158 30.4
SGA_v2.0_scaffold17G08162 Striga asiatica HOM05D001602 ORTHO05D001470 3.2e-06 57.0 204 26.5
Manes.02G137300 Manihot esculenta HOM05D002956 ORTHO05D008031 4.2e-06 56.6 187 28.9
SalBow2G2154 Salvia bowleyana HOM05D001602 ORTHO05D001470 4.2e-06 56.6 92 41.3
CARHR118990 Cardamine hirsuta HOM05D002956 ORTHO05D008031 5.5e-06 56.2 115 33.9
Gohir.A07G121300 Gossypium hirsutum HOM05D002956 ORTHO05D008031 5.5e-06 56.2 189 27.0
Solyc03g120130.4 Solanum lycopersicum HOM05D006908 ORTHO05D008662 5.5e-06 56.2 158 30.4
CsaV3_3G025130 Cucumis sativus L. HOM05D006908 ORTHO05D008662 7.2e-06 55.8 162 29.0
DCAR_023055 Daucus carota HOM05D006908 ORTHO05D008662 7.2e-06 55.8 161 27.3
MBI03_g11897_MAGBIO Magnolia biondii HOM05D001602 ORTHO05D001470 7.2e-06 55.8 92 41.3
MCO04G411 Micromonas commoda HOM05D000874 ORTHO05D001049 7.2e-06 55.8 169 26.6
Psat5g298720 Pisum sativum HOM05D006908 ORTHO05D008662 7.2e-06 55.8 162 27.8
AL4G20000 Arabidopsis lyrata HOM05D002956 ORTHO05D008031 9.3e-06 55.5 115 33.0
CANSAT11G0022 Cannabis sativa HOM05D001602 ORTHO05D001470 9.3e-06 55.5 93 37.6
Migut.G01316 Erythranthe guttata HOM05D001602 ORTHO05D001470 9.3e-06 55.5 92 41.3
FAN09G3067 Fragaria x ananassa HOM05D006908 ORTHO05D008662 9.3e-06 55.5 162 28.4
Os06g0101100 Oryza sativa ssp. japonica HOM05D001602 ORTHO05D001470 9.3e-06 55.5 92 42.4
RcHm_v2.0_Chr2g0101571 Rosa chinensis HOM05D005677 ORTHO05D006966 9.3e-06 55.5 151 32.5


User provided reference genes

Program Settings