Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO15G657 Micromonas commoda HOM05D005294 ORTHO05D006720 5.8e-286 986.9 504 100.0
Mapoly0079s0005 Marchantia polymorpha HOM05D005294 ORTHO05D006720 2.5e-42 177.6 472 28.4
Pp3c15_19200 Physcomitrium patens HOM05D005294 ORTHO05D006720 1.2e-41 175.3 405 29.9
CBR_g45363 Chara braunii HOM05D005294 ORTHO05D006720 6.7e-40 169.5 381 31.5
PRCOL_00004982 Prasinoderma coloniale HOM05D005294 ORTHO05D006720 5.9e-36 156.4 427 32.6
SEGI_34717 Sequoiadendron giganteum HOM05D005294 ORTHO05D006720 5.9e-36 156.4 477 27.3
TAR624G1381 Trochodendron aralioides HOM05D005294 ORTHO05D006720 4.7e-33 146.7 450 25.6
MBI04_g06995_MAGBIO Magnolia biondii HOM05D005294 ORTHO05D006720 1.4e-32 145.2 442 25.8
Cre03.g186500 Chlamydomonas reinhardtii HOM05D005294 ORTHO05D006720 1.8e-32 144.8 363 30.6
Nitab4.5_0004011g0060 Nicotiana tabacum HOM05D005294 ORTHO05D006720 4.4e-31 140.2 448 25.2
Nitab4.5_0001492g0020 Nicotiana tabacum HOM05D005294 ORTHO05D006720 1.7e-30 138.3 443 25.5
FvH4_1g06810 Fragaria vesca HOM05D005294 ORTHO05D006720 2.2e-30 137.9 442 24.9
PSO210G3043 Papaver somniferum HOM05D005294 ORTHO05D006720 2.2e-30 137.9 449 26.1
Dinv36732 Davidia involucrata HOM05D005294 ORTHO05D006720 2.8e-30 137.5 447 23.7
Eucgr.C03688 Eucalyptus grandis HOM05D005294 ORTHO05D006720 2.8e-30 137.5 487 25.7
FAN26G2354 Fragaria x ananassa HOM05D005294 ORTHO05D006720 2.8e-30 137.5 441 25.2
FAN19G0312 Fragaria x ananassa HOM05D005294 ORTHO05D006720 3.7e-30 137.1 439 25.1
PSO210G1233 Papaver somniferum HOM05D005294 ORTHO05D006720 3.7e-30 137.1 347 28.2
PGR102G3363 Punica granatum HOM05D005294 ORTHO05D006720 8.2e-30 136.0 452 24.8
FAN23G1873 Fragaria x ananassa HOM05D005294 ORTHO05D006720 1.1e-29 135.6 441 25.2
FAN26G0700 Fragaria x ananassa HOM05D005294 ORTHO05D006720 2.4e-29 134.4 487 25.5
PGSC0003DMG400033362 Solanum tuberosum HOM05D005294 ORTHO05D006720 4.1e-29 133.7 454 24.0
CARHR270490 Cardamine hirsuta HOM05D005294 ORTHO05D006720 5.3e-29 133.3 350 25.4
AUR62025414 Chenopodium quinoa HOM05D005294 ORTHO05D006720 7.0e-29 132.9 335 28.4
EL10Ac7g17721 Beta vulgaris HOM05D005294 ORTHO05D006720 1.2e-28 132.1 333 27.9
Solyc02g068580.1 Solanum lycopersicum HOM05D005294 ORTHO05D006720 1.2e-28 132.1 449 24.3
arahy.Tifrunner.gnm1.ann1.T94LMP Arachis hypogaea HOM05D005294 ORTHO05D006720 1.6e-28 131.7 355 27.6
Carub.0008s1722 Capsella rubella HOM05D005294 ORTHO05D006720 1.6e-28 131.7 349 25.8
LjContig00141g0021499 Lotus japonicus HOM05D005294 ORTHO05D006720 1.6e-28 131.7 450 25.8
Peaxi162Scf01468g00004 Petunia axillaris HOM05D005294 ORTHO05D006720 1.6e-28 131.7 437 24.7
Sed0020374 Sechium edule HOM05D005294 ORTHO05D006720 1.6e-28 131.7 443 25.1
Sopen02g017740 Solanum pennellii HOM05D005294 ORTHO05D006720 1.6e-28 131.7 449 24.3
Atru.chr7.1522 Acer truncatum HOM05D005294 ORTHO05D006720 2.0e-28 131.3 491 24.8
Migut.J00438 Erythranthe guttata HOM05D005294 ORTHO05D006720 2.0e-28 131.3 447 22.8
THA.LOC104811733 Tarenaya hassleriana HOM05D005294 ORTHO05D006720 2.0e-28 131.3 357 26.1
Ah.15g091540 Amaranthus hybridus HOM05D005294 ORTHO05D006720 2.6e-28 131.0 346 28.0
Aqoxy7G03926 Aquilegia oxysepala HOM05D005294 ORTHO05D006720 2.6e-28 131.0 356 27.0
Glyma.02G250900 Glycine max HOM05D005294 ORTHO05D006720 2.6e-28 131.0 457 24.9
AUR62008827 Chenopodium quinoa HOM05D005294 ORTHO05D006720 3.5e-28 130.6 333 28.2
Phvul.008G230500 Phaseolus vulgaris HOM05D005294 ORTHO05D006720 3.5e-28 130.6 454 24.4
arahy.Tifrunner.gnm1.ann1.CWN4E9 Arachis hypogaea HOM05D005294 ORTHO05D006720 4.5e-28 130.2 456 25.0
Medtr5g080780 Medicago truncatula HOM05D005294 ORTHO05D006720 4.5e-28 130.2 447 23.9
CANSAT64G1758 Cannabis sativa HOM05D005294 ORTHO05D006720 5.9e-28 129.8 479 25.5
DCAR_012006 Daucus carota HOM05D005294 ORTHO05D006720 5.9e-28 129.8 409 26.7
Lj7C671G8 Lonicera japonica HOM05D005294 ORTHO05D006720 5.9e-28 129.8 449 23.8
Cc06_g10960 Coffea canephora HOM05D005294 ORTHO05D006720 7.7e-28 129.4 423 25.1
AT5G56740 Arabidopsis thaliana HOM05D005294 ORTHO05D006720 1.3e-27 128.6 349 24.4
Ciclev10008203m.g Citrus clementina HOM05D005294 ORTHO05D006720 1.3e-27 128.6 361 25.5
AL8G32570 Arabidopsis lyrata HOM05D005294 ORTHO05D006720 1.7e-27 128.3 349 24.6
RcHm_v2.0_Chr2g0092581 Rosa chinensis HOM05D005294 ORTHO05D006720 1.7e-27 128.3 441 24.0
Potri.013G068200 Populus trichocarpa HOM05D005294 ORTHO05D006720 3.8e-27 127.1 455 23.5
Sc08g0008210 Simmondsia chinensis HOM05D005294 ORTHO05D006720 3.8e-27 127.1 455 24.0
CSS0007070 Camellia sinensis var. sinensis HOM05D005294 ORTHO05D006720 5.0e-27 126.7 451 23.7
HanXRQChr12g0355321 Helianthus annuus HOM05D005294 ORTHO05D006720 6.5e-27 126.3 445 24.7
CAN.G142.7 Capsicum annuum HOM05D005294 ORTHO05D006720 1.1e-26 125.6 455 23.5
Ca_05904_v3 Cicer arietinum L. HOM05D005294 ORTHO05D006720 1.1e-26 125.6 416 25.5
Glyma.14G065800 Glycine max HOM05D005294 ORTHO05D006720 1.1e-26 125.6 454 23.8
Lsat_1_v5_gn_5_146040 Lactuca sativa HOM05D005294 ORTHO05D006720 1.1e-26 125.6 420 25.2
CiPaw.03G219800 Carya illinoinensis HOM05D005294 ORTHO05D006720 1.5e-26 125.2 458 24.0
TPR.G25848 Trifolium pratense HOM05D005294 ORTHO05D006720 1.9e-26 124.8 447 23.9
VMungo0647G0234 Vigna mungo HOM05D005294 ORTHO05D006720 2.5e-26 124.4 450 24.0
MD02G1072700 Malus domestica HOM05D005294 ORTHO05D006720 3.2e-26 124.0 454 25.6
MSTRG.19532 Avicennia marina HOM05D005294 ORTHO05D006720 4.2e-26 123.6 447 21.7
Lalb_Chr18g0053011 Lupinus albus HOM05D005294 ORTHO05D006720 4.2e-26 123.6 454 23.8
CSS0004577 Camellia sinensis var. sinensis HOM05D005294 ORTHO05D006720 5.5e-26 123.2 451 23.5
Haze_25869 Corylus avellana HOM05D005294 ORTHO05D006720 5.5e-26 123.2 458 22.9
CsaV3_2G001600 Cucumis sativus L. HOM05D005294 ORTHO05D006720 5.5e-26 123.2 450 25.8
MD15G1202500 Malus domestica HOM05D005294 ORTHO05D006720 5.5e-26 123.2 457 24.7
TWI34G0876 Tripterygium wilfordii HOM05D005294 ORTHO05D006720 5.5e-26 123.2 455 22.9
TWI63G0491 Tripterygium wilfordii HOM05D005294 ORTHO05D006720 5.5e-26 123.2 454 23.3
BraA03t10634Z Brassica rapa HOM05D005294 ORTHO05D006720 9.4e-26 122.5 377 24.9
BcaB01g04417 Brassica carinata HOM05D005294 ORTHO05D006720 2.1e-25 121.3 351 25.1
BolC3t13987H Brassica oleracea HOM05D005294 ORTHO05D006720 2.1e-25 121.3 377 25.2
Thhalv10013465m.g Eutrema salsugineum HOM05D005294 ORTHO05D006720 2.7e-25 120.9 378 24.6
COL.COLO4_18242 Corchorus olitorius HOM05D005294 ORTHO05D006720 3.6e-25 120.6 439 23.5
Os09g0347800 Oryza sativa ssp. japonica HOM05D005294 ORTHO05D006720 3.6e-25 120.6 418 24.2
Psat2g038680 Pisum sativum HOM05D005294 ORTHO05D006720 3.6e-25 120.6 444 22.5
Aa31LG3G12690 Aethionema arabicum HOM05D005294 ORTHO05D006720 4.7e-25 120.2 326 24.8
Gohir.D06G069100 Gossypium hirsutum HOM05D005294 ORTHO05D006720 4.7e-25 120.2 443 23.3
Gorai.010G080700 Gossypium raimondii HOM05D005294 ORTHO05D006720 4.7e-25 120.2 443 23.3
Hund05510 Selenicereus undatus HOM05D005294 ORTHO05D006720 6.1e-25 119.8 353 26.3
unitig_26.g9161 Utricularia gibba HOM05D005294 ORTHO05D006720 6.1e-25 119.8 367 26.4
C03p15490 Brassica napus HOM05D005294 ORTHO05D006720 1.0e-24 119.0 375 24.8
ECA234G1346 Erigeron canadensis HOM05D005294 ORTHO05D006720 1.0e-24 119.0 449 24.7
BcaB08g36064 Brassica carinata HOM05D005294 ORTHO05D006720 2.3e-24 117.9 378 24.9
A03p13220 Brassica napus HOM05D005294 ORTHO05D006720 2.3e-24 117.9 377 24.7
BcaC01g06444 Brassica carinata HOM05D005294 ORTHO05D006720 4.0e-24 117.1 377 24.4
Lalb_Chr15g0084501 Lupinus albus HOM05D005294 ORTHO05D006720 4.0e-24 117.1 445 22.9
Manes.16G105100 Manihot esculenta HOM05D005294 ORTHO05D006720 6.7e-24 116.3 438 23.7
Gohir.A06G070500 Gossypium hirsutum HOM05D005294 ORTHO05D006720 8.8e-24 115.9 440 23.2
Nn6g35397 Nelumbo nucifera HOM05D005294 ORTHO05D006720 8.8e-24 115.9 270 27.4
Sabra13G0059500 Salix brachista HOM05D005294 ORTHO05D006720 8.8e-24 115.9 404 22.8
ClCG11G001870 Citrullus lanatus HOM05D005294 ORTHO05D006720 1.2e-23 115.5 450 25.6
Sp6g18490 Schrenkiella parvula HOM05D005294 ORTHO05D006720 1.2e-23 115.5 349 23.8
ATR0705G179 Amborella trichopoda HOM05D005294 ORTHO05D006720 1.5e-23 115.2 397 24.2
Rhsim05G0031400 Rhododendron simsii HOM05D005294 ORTHO05D006720 2.6e-23 114.4 448 21.9
Cfa003134 Carpinus fangiana HOM05D005294 ORTHO05D006720 3.3e-23 114.0 456 22.6
BraA10t43499Z Brassica rapa HOM05D005294 ORTHO05D006720 7.5e-23 112.8 382 25.7
GSVIVG01015248001 Vitis vinifera HOM05D005294 ORTHO05D006720 7.5e-23 112.8 444 22.3
Cpa.g.sc32.101 Carica papaya HOM05D005294 ORTHO05D006720 9.7e-23 112.5 349 24.9
Duzib168G2227 Durio zibethinus HOM05D005294 ORTHO05D006720 9.7e-23 112.5 442 21.9
vmacro10822 Vaccinium macrocarpon HOM05D005294 ORTHO05D006720 1.3e-22 112.1 442 23.3
A10p14080 Brassica napus HOM05D005294 ORTHO05D006720 2.2e-22 111.3 382 25.4
CDE09G1011 Ceratophyllum demersum HOM05D005294 ORTHO05D006720 2.2e-22 111.3 347 26.2
Thecc.09G094300 Theobroma cacao HOM05D005294 ORTHO05D006720 2.2e-22 111.3 446 22.4
Actinidia39748 Actinidia chinensis HOM05D005294 ORTHO05D006720 3.7e-22 110.5 479 22.5
MELO3C004615.2 Cucumis melo HOM05D005294 ORTHO05D006720 4.8e-22 110.2 292 29.5
Prupe.7G214700 Prunus persica HOM05D005294 ORTHO05D006720 6.3e-22 109.8 493 23.3
HPP92_009085 Vanilla planifolia HOM05D005294 ORTHO05D006720 8.2e-22 109.4 430 23.0
QL02p063470 Quercus lobata HOM05D005294 ORTHO05D006720 3.1e-21 107.5 459 22.4
Aqoxy4G01946 Aquilegia oxysepala HOM05D005294 ORTHO05D006720 7.0e-21 106.3 363 24.0
Zm00001eb310550 Zea mays HOM05D005294 ORTHO05D006720 1.5e-18 98.6 379 23.7
BcaC04g20057 Brassica carinata HOM05D005294 ORTHO05D006720 4.4e-15 87.0 350 24.9
Zm00001eb171070 Zea mays HOM05D005294 ORTHO05D006720 6.3e-14 83.2 130 32.3
Zm00001eb301910 Zea mays HOM05D005294 ORTHO05D006720 6.3e-14 83.2 130 32.3
C09p48310 Brassica napus HOM05D005294 ORTHO05D006720 5.4e-13 80.1 182 28.6
BolC9t57681H Brassica oleracea HOM05D005294 ORTHO05D006720 5.4e-13 80.1 182 28.6
RcHm_v2.0_Chr2g0093921 Rosa chinensis HOM05D005294 ORTHO05D006720 5.4e-13 80.1 97 38.1
SHI02790 Sapria himalayana HOM05D005294 ORTHO05D006720 7.7e-12 76.3 187 25.1
SMO281G0026 Selaginella moellendorffii HOM05D005294 ORTHO05D006720 1.6e-09 68.6 121 33.1
Aa31LG3G12670 Aethionema arabicum HOM05D004235 ORTHO05D005157 3.0e-08 64.3 100 31.0


User provided reference genes

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