Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO15G608 Micromonas commoda HOM05D007407 ORTHO05D009298 9.8e-106 387.1 220 100.0
AT4G33925 Arabidopsis thaliana HOM05D007407 ORTHO05D009298 3.0e-22 109.8 132 42.4
Thhalv10026553m.g Eutrema salsugineum HOM05D007407 ORTHO05D009298 4.0e-22 109.4 132 42.4
Peaxi162Scf00152g00338 Petunia axillaris HOM05D007407 ORTHO05D009298 6.8e-22 108.6 134 41.8
Carub.0007s0650 Capsella rubella HOM05D007407 ORTHO05D009298 8.8e-22 108.2 132 41.7
BraA01t00434Z Brassica rapa HOM05D007407 ORTHO05D009298 1.5e-21 107.5 132 41.7
Cc02_g19580 Coffea canephora HOM05D007407 ORTHO05D009298 1.5e-21 107.5 134 44.0
Sp7g31660 Schrenkiella parvula HOM05D007407 ORTHO05D009298 2.0e-21 107.1 132 40.9
CARHR242020 Cardamine hirsuta HOM05D007407 ORTHO05D009298 2.6e-21 106.7 132 40.9
Aa31sc211G10 Aethionema arabicum HOM05D007407 ORTHO05D009298 3.4e-21 106.3 132 40.9
Zm00001eb326460 Zea mays HOM05D007407 ORTHO05D009298 3.4e-21 106.3 139 38.8
Potri.009G091800 Populus trichocarpa HOM05D007407 ORTHO05D009298 5.7e-21 105.5 130 41.5
AL7G17500 Arabidopsis lyrata HOM05D007407 ORTHO05D009298 1.7e-20 104.0 132 40.9
RcHm_v2.0_Chr6g0254151 Rosa chinensis HOM05D007407 ORTHO05D009298 1.7e-20 104.0 130 41.5
Sabra09G0070800 Salix brachista HOM05D007407 ORTHO05D009298 2.8e-20 103.2 130 40.8
C01p04860 Brassica napus HOM05D007407 ORTHO05D009298 3.7e-20 102.8 139 41.0
CAN.G13.9 Capsicum annuum HOM05D007407 ORTHO05D009298 4.8e-20 102.4 137 38.7
Sopen11g019840 Solanum pennellii HOM05D007407 ORTHO05D009298 6.3e-20 102.1 134 38.1
TAR628G1347 Trochodendron aralioides HOM05D007407 ORTHO05D009298 6.3e-20 102.1 130 40.0
HanXRQChr16g0509111 Helianthus annuus HOM05D007407 ORTHO05D009298 1.1e-19 101.3 133 39.8
Oeu044262.1 Olea europaea HOM05D007407 ORTHO05D009298 1.1e-19 101.3 132 39.4
Eucgr.I01082 Eucalyptus grandis HOM05D007407 ORTHO05D009298 1.4e-19 100.9 110 45.5
FvH4_2g04570 Fragaria vesca HOM05D007407 ORTHO05D009298 2.4e-19 100.1 130 40.0
Nn1g04637 Nelumbo nucifera HOM05D007407 ORTHO05D009298 2.4e-19 100.1 133 39.1
Rhsim11G0155200 Rhododendron simsii HOM05D007407 ORTHO05D009298 2.4e-19 100.1 113 45.1
TWI59G1341 Tripterygium wilfordii HOM05D007407 ORTHO05D009298 2.4e-19 100.1 130 40.0
FAN15G3071 Fragaria x ananassa HOM05D007407 ORTHO05D009298 3.1e-19 99.8 130 40.8
Sed0024111 Sechium edule HOM05D007407 ORTHO05D009298 3.1e-19 99.8 130 40.8
CANSAT25G3533 Cannabis sativa HOM05D007407 ORTHO05D009298 4.1e-19 99.4 130 38.5
FAN27G0322 Fragaria x ananassa HOM05D007407 ORTHO05D009298 4.1e-19 99.4 130 40.8
Nitab4.5_0000088g0130 Nicotiana tabacum HOM05D007407 ORTHO05D009298 4.1e-19 99.4 113 42.5
Lsat_1_v5_gn_7_86121 Lactuca sativa HOM05D007407 ORTHO05D009298 5.4e-19 99.0 122 43.4
Atru.chr5.2418 Acer truncatum HOM05D007407 ORTHO05D009298 9.1e-19 98.2 110 45.5
RhsimUnG0126400 Rhododendron simsii HOM05D007407 ORTHO05D009298 9.1e-19 98.2 133 38.3
AagrBONN_evm.TU.Sc2ySwM_228.2221 Anthoceros agrestis HOM05D007407 ORTHO05D009298 1.2e-18 97.8 144 41.0
MSTRG.27752 Avicennia marina HOM05D007407 ORTHO05D009298 1.2e-18 97.8 134 38.1
SalBow3G4546 Salvia bowleyana HOM05D007407 ORTHO05D009298 1.6e-18 97.4 130 40.0
CANSAT25G2132 Cannabis sativa HOM05D007407 ORTHO05D009298 2.0e-18 97.1 110 43.6
AUR62008735 Chenopodium quinoa HOM05D007407 ORTHO05D009298 2.7e-18 96.7 130 39.2
Hund12642 Selenicereus undatus HOM05D007407 ORTHO05D009298 2.7e-18 96.7 118 44.9
Sc18g0003630 Simmondsia chinensis HOM05D007407 ORTHO05D009298 2.7e-18 96.7 131 38.2
Actinidia34378 Actinidia chinensis HOM05D007407 ORTHO05D009298 3.5e-18 96.3 110 44.5
Aqoxy6G02771 Aquilegia oxysepala HOM05D007407 ORTHO05D009298 3.5e-18 96.3 130 39.2
EL10Ac6g13315 Beta vulgaris HOM05D007407 ORTHO05D009298 3.5e-18 96.3 130 40.8
Cpa.g.c35560 Carica papaya HOM05D007407 ORTHO05D009298 3.5e-18 96.3 131 39.7
DCAR_001669 Daucus carota HOM05D007407 ORTHO05D009298 3.5e-18 96.3 134 35.8
MD10G1101800 Malus domestica HOM05D007407 ORTHO05D009298 3.5e-18 96.3 130 39.2
Thecc.02G113100 Theobroma cacao HOM05D007407 ORTHO05D009298 3.5e-18 96.3 110 43.6
TPR.G5138 Trifolium pratense HOM05D007407 ORTHO05D009298 3.5e-18 96.3 130 38.5
Lj3g0017118 Lotus japonicus HOM05D007407 ORTHO05D009298 5.9e-18 95.5 130 38.5
GSVIVG01037877001 Vitis vinifera HOM05D007407 ORTHO05D009298 5.9e-18 95.5 141 36.2
BolC1t00470H Brassica oleracea HOM05D007407 ORTHO05D009298 1.0e-17 94.7 95 48.4
CsaV3_4G000500 Cucumis sativus L. HOM05D007407 ORTHO05D009298 1.0e-17 94.7 133 37.6
Duzib052G0893 Durio zibethinus HOM05D007407 ORTHO05D009298 1.0e-17 94.7 110 42.7
Psat5g233480 Pisum sativum HOM05D007407 ORTHO05D009298 1.0e-17 94.7 130 38.5
SEGI_09286 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 1.0e-17 94.7 135 35.6
Ciclev10029563m.g Citrus clementina HOM05D007407 ORTHO05D009298 1.3e-17 94.4 130 37.7
CiPaw.05G014900 Carya illinoinensis HOM05D007407 ORTHO05D009298 1.7e-17 94.0 129 38.0
Phvul.005G003200 Phaseolus vulgaris HOM05D007407 ORTHO05D009298 1.7e-17 94.0 130 39.2
ClCG10G010580 Citrullus lanatus HOM05D007407 ORTHO05D009298 2.2e-17 93.6 130 38.5
Hma1.2p1_1023F.1_g248940 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 3.8e-17 92.8 134 36.6
SGA_v2.0_scaffold13G06621 Striga asiatica HOM05D007407 ORTHO05D009298 6.5e-17 92.0 112 40.2
Migut.I00274 Erythranthe guttata HOM05D007407 ORTHO05D009298 8.5e-17 91.7 110 40.0
THA.LOC104807229 Tarenaya hassleriana HOM05D007407 ORTHO05D009298 1.1e-16 91.3 102 47.1
Glyma.04G111400 Glycine max HOM05D007407 ORTHO05D009298 1.5e-16 90.9 130 38.5
HPP92_010144 Vanilla planifolia HOM05D007407 ORTHO05D009298 1.5e-16 90.9 132 36.4
Medtr0393s0040 Medicago truncatula HOM05D007407 ORTHO05D009298 1.9e-16 90.5 127 36.2
ECA236G1324 Erigeron canadensis HOM05D007407 ORTHO05D009298 3.2e-16 89.7 96 45.8
Gohir.A03G184200 Gossypium hirsutum HOM05D007407 ORTHO05D009298 3.2e-16 89.7 110 41.8
Gohir.D02G205700 Gossypium hirsutum HOM05D007407 ORTHO05D009298 3.2e-16 89.7 110 41.8
Gorai.005G233100 Gossypium raimondii HOM05D007407 ORTHO05D009298 3.2e-16 89.7 110 41.8
Glyma.06G322800 Glycine max HOM05D007407 ORTHO05D009298 4.2e-16 89.4 110 41.8
Medtr3g010320 Medicago truncatula HOM05D007407 ORTHO05D009298 5.5e-16 89.0 130 36.2
QL11p032060 Quercus lobata HOM05D007407 ORTHO05D009298 5.5e-16 89.0 133 35.3
Lalb_Chr18g0048491 Lupinus albus HOM05D007407 ORTHO05D009298 9.4e-16 88.2 133 35.3
Mapoly0083s0061 Marchantia polymorpha HOM05D007407 ORTHO05D009298 9.4e-16 88.2 110 40.0
Pp3c22_18210 Physcomitrium patens HOM05D007407 ORTHO05D009298 9.4e-16 88.2 136 39.7
arahy.Tifrunner.gnm1.ann1.2Y2YM1 Arachis hypogaea HOM05D007407 ORTHO05D009298 1.6e-15 87.4 131 36.6
arahy.Tifrunner.gnm1.ann1.D6X9Y4 Arachis hypogaea HOM05D007407 ORTHO05D009298 2.1e-15 87.0 131 36.6
VMungo1080G0753 Vigna mungo HOM05D007407 ORTHO05D009298 3.6e-15 86.3 102 42.2
PGSC0003DMG400023130 Solanum tuberosum HOM05D007407 ORTHO05D009298 6.1e-15 85.5 84 47.6
Solyc11g044330.3 Solanum lycopersicum HOM05D007407 ORTHO05D009298 1.8e-14 84.0 104 37.5
Nitab4.5_0000700g0060 Nicotiana tabacum HOM05D007407 ORTHO05D009298 4.0e-14 82.8 83 45.8
Cre16.g668000 Chlamydomonas reinhardtii HOM05D007407 ORTHO05D009298 8.8e-14 81.6 140 31.4
CBR_g6331 Chara braunii HOM05D007407 ORTHO05D009298 1.5e-13 80.9 125 33.6
vmacro01981 Vaccinium macrocarpon HOM05D007407 ORTHO05D009298 1.5e-13 80.9 130 36.2
Dinv42215 Davidia involucrata HOM05D007407 ORTHO05D009298 2.6e-13 80.1 103 41.7
Manes.07G063400 Manihot esculenta HOM05D007407 ORTHO05D009298 7.5e-13 78.6 81 46.9
SHI05205 Sapria himalayana HOM05D007407 ORTHO05D009298 2.2e-12 77.0 78 47.4
MD05G1094600 Malus domestica HOM05D007407 ORTHO05D009298 4.1e-11 72.8 104 36.5
Manes.07G065401 Manihot esculenta HOM05D007407 ORTHO05D009298 4.3e-08 62.8 59 45.8
SMO330G0043 Selaginella moellendorffii HOM05D007407 ORTHO05D009298 1.6e-07 60.8 96 34.4
Duzib132G0979 Durio zibethinus HOM05D007407 ORTHO05D009298 2.8e-07 60.1 107 32.7


User provided reference genes

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