Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO15G341 Micromonas commoda HOM05D007420 ORTHO05D009353 9.9e-36 152.9 77 100.0
Hma1.2p1_0018F.1_g012820 Hydrangea macrophylla HOM05D007420 ORTHO05D009353 6.1e-09 63.9 69 52.2
Hma1.2p1_0018F.1_g012830 Hydrangea macrophylla HOM05D007420 ORTHO05D009353 7.9e-09 63.5 52 59.6
AT1G68680 Arabidopsis thaliana HOM05D007420 ORTHO05D009353 2.3e-08 62.0 61 47.5
Thhalv10019233m.g Eutrema salsugineum HOM05D007420 ORTHO05D009353 3.9e-08 61.2 61 47.5
Hund09157 Selenicereus undatus HOM05D007420 ORTHO05D009353 3.9e-08 61.2 68 45.6
AagrBONN_evm.TU.Sc2ySwM_362.2614 Anthoceros agrestis HOM05D007420 ORTHO05D009353 6.7e-08 60.5 46 58.7
AL2G27600 Arabidopsis lyrata HOM05D007420 ORTHO05D009353 6.7e-08 60.5 61 47.5
Sp5g23780 Schrenkiella parvula HOM05D007420 ORTHO05D009353 6.7e-08 60.5 61 47.5
vmacro20648 Vaccinium macrocarpon HOM05D007420 ORTHO05D009353 6.7e-08 60.5 69 47.8
CARHR061490 Cardamine hirsuta HOM05D007420 ORTHO05D009353 8.8e-08 60.1 61 47.5
Actinidia22015 Actinidia chinensis HOM05D007420 ORTHO05D009353 2.0e-07 58.9 69 44.9
CSS0016223 Camellia sinensis var. sinensis HOM05D007420 ORTHO05D009353 2.0e-07 58.9 45 62.2
Carub.0002s1522 Capsella rubella HOM05D007420 ORTHO05D009353 2.0e-07 58.9 61 45.9
Migut.L01525 Erythranthe guttata HOM05D007420 ORTHO05D009353 2.0e-07 58.9 53 52.8
BraA07t30816Z Brassica rapa HOM05D007420 ORTHO05D009353 2.6e-07 58.5 62 45.2
AUR62033448 Chenopodium quinoa HOM05D007420 ORTHO05D009353 2.6e-07 58.5 44 56.8
MD15G1177800 Malus domestica HOM05D007420 ORTHO05D009353 2.6e-07 58.5 52 50.0
BcaB03g15439 Brassica carinata HOM05D007420 ORTHO05D009353 3.3e-07 58.2 53 50.9
BcaB03g15440 Brassica carinata HOM05D007420 ORTHO05D009353 3.3e-07 58.2 55 49.1
BcaC08g45947 Brassica carinata HOM05D007420 ORTHO05D009353 3.3e-07 58.2 55 49.1
CANSAT56G4260 Cannabis sativa HOM05D007420 ORTHO05D009353 3.3e-07 58.2 45 57.8
ECA240G1805 Erigeron canadensis HOM05D007420 ORTHO05D009353 3.3e-07 58.2 46 54.3
HanXRQChr03g0062071 Helianthus annuus HOM05D007420 ORTHO05D009353 3.3e-07 58.2 46 54.3
Pp3c11_6600 Physcomitrium patens HOM05D007420 ORTHO05D009353 3.3e-07 58.2 58 48.3
RcHm_v2.0_Chr2g0089401 Rosa chinensis HOM05D007420 ORTHO05D009353 3.3e-07 58.2 52 50.0
C06p37440 Brassica napus HOM05D007420 ORTHO05D032647 4.4e-07 57.8 54 50.0
BolC6t38847H Brassica oleracea HOM05D007420 ORTHO05D009353 4.4e-07 57.8 54 50.0
CsaV3_2G002630 Cucumis sativus L. HOM05D007420 ORTHO05D009353 4.4e-07 57.8 52 51.9
Psat4g040560 Pisum sativum HOM05D007420 ORTHO05D009353 4.4e-07 57.8 45 55.6
SalBow1G2150 Salvia bowleyana HOM05D007420 ORTHO05D009353 4.4e-07 57.8 55 47.3
Zm00001eb283090 Zea mays HOM05D007420 ORTHO05D009353 4.4e-07 57.8 45 53.3
EL10Ac8g18588 Beta vulgaris HOM05D007420 ORTHO05D009353 5.7e-07 57.4 60 45.0
MELO3C004528.2 Cucumis melo HOM05D007420 ORTHO05D009353 5.7e-07 57.4 52 51.9
PRCOL_00005092 Prasinoderma coloniale HOM05D007420 ORTHO05D009353 5.7e-07 57.4 49 53.1
HPP92_024085 Vanilla planifolia HOM05D007420 ORTHO05D009353 5.7e-07 57.4 44 59.1
Prupe.7G237700 Prunus persica HOM05D007420 ORTHO05D009353 7.4e-07 57.0 52 50.0
Sabra11G0015300 Salix brachista HOM05D007420 ORTHO05D009353 7.4e-07 57.0 52 48.1
Ciclev10009973m.g Citrus clementina HOM05D007420 ORTHO05D009353 9.7e-07 56.6 45 57.8
DCAR_014860 Daucus carota HOM05D007420 ORTHO05D009353 9.7e-07 56.6 78 41.0
FvH4_1g03930 Fragaria vesca HOM05D007420 ORTHO05D009353 9.7e-07 56.6 64 46.9
MD02G1037600 Malus domestica HOM05D007420 ORTHO05D009353 9.7e-07 56.6 52 48.1
PSO170G5167 Papaver somniferum HOM05D007420 ORTHO05D009353 9.7e-07 56.6 46 54.3
SalBow6G6280 Salvia bowleyana HOM05D007420 ORTHO05D009353 9.7e-07 56.6 47 55.3
A07p31870 Brassica napus HOM05D007420 ORTHO05D009353 1.3e-06 56.2 54 48.1
Mapoly0048s0106 Marchantia polymorpha HOM05D007420 ORTHO05D009353 1.3e-06 56.2 46 56.5
Os05g0176600 Oryza sativa ssp. japonica HOM05D007420 ORTHO05D009353 1.3e-06 56.2 43 58.1
Sed0006703 Sechium edule HOM05D007420 ORTHO05D009353 1.3e-06 56.2 58 48.3
TPR.G9078 Trifolium pratense HOM05D007420 ORTHO05D009353 1.3e-06 56.2 46 54.3
TWI34G1269 Tripterygium wilfordii HOM05D007420 ORTHO05D009353 1.3e-06 56.2 66 40.9
arahy.Tifrunner.gnm1.ann1.QR7ILI Arachis hypogaea HOM05D007420 ORTHO05D009353 1.7e-06 55.8 45 55.6
arahy.Tifrunner.gnm1.ann1.XPL4AE Arachis hypogaea HOM05D007420 ORTHO05D009353 1.7e-06 55.8 45 55.6
SHI28897 Sapria himalayana HOM05D007420 ORTHO05D009353 1.7e-06 55.8 47 51.1
TWI32G1185 Tripterygium wilfordii HOM05D007420 ORTHO05D009353 1.7e-06 55.8 66 42.4
Atru.chr7.1239 Acer truncatum HOM05D007420 ORTHO05D009353 2.2e-06 55.5 63 42.9
Aa31sc12G90 Aethionema arabicum HOM05D007420 ORTHO05D009353 2.2e-06 55.5 54 44.4
ClCG11G002810 Citrullus lanatus HOM05D007420 ORTHO05D009353 2.2e-06 55.5 52 50.0
Cc06_g08970 Coffea canephora HOM05D007420 ORTHO05D009353 2.8e-06 55.1 45 55.6
Lj4g0001906 Lotus japonicus HOM05D007420 ORTHO05D009353 2.8e-06 55.1 45 53.3
Dinv36572 Davidia involucrata HOM05D007420 ORTHO05D009353 3.7e-06 54.7 45 57.8
FAN19G3121 Fragaria x ananassa HOM05D007420 ORTHO05D009353 3.7e-06 54.7 52 51.9
Glyma.05G010400 Glycine max HOM05D007420 ORTHO05D009353 3.7e-06 54.7 45 53.3
Lalb_Chr13g0302091 Lupinus albus HOM05D007420 ORTHO05D009353 4.8e-06 54.3 46 50.0
unitig_85.g27256 Utricularia gibba HOM05D000953 ORTHO05D000231 4.8e-06 54.3 45 55.6
Manes.06G052500 Manihot esculenta HOM05D007420 ORTHO05D009353 6.3e-06 53.9 45 53.3
Nn2g11931 Nelumbo nucifera HOM05D007420 ORTHO05D009353 6.3e-06 53.9 45 55.6
Potri.011G024500 Populus trichocarpa HOM05D007420 ORTHO05D009353 6.3e-06 53.9 45 51.1
PGR102G0502 Punica granatum HOM05D007420 ORTHO05D009353 6.3e-06 53.9 48 52.1
CAN.G1424.4 Capsicum annuum HOM05D007420 ORTHO05D009353 8.2e-06 53.5 43 55.8
Duzib150G1214 Durio zibethinus HOM05D007420 ORTHO05D009353 8.2e-06 53.5 46 50.0
Eucgr.L02717 Eucalyptus grandis HOM05D007420 ORTHO05D009353 8.2e-06 53.5 52 48.1
FAN22G2307 Fragaria x ananassa HOM05D022909 ORTHO05D009353 8.2e-06 53.5 64 42.2
FAN23G1905 Fragaria x ananassa HOM05D007420 ORTHO05D009353 8.2e-06 53.5 64 42.2
FAN26G1322 Fragaria x ananassa HOM05D007420 ORTHO05D009353 8.2e-06 53.5 64 42.2
FAN28G1248 Fragaria x ananassa HOM05D007420 ORTHO05D009353 8.2e-06 53.5 64 42.2
THA.LOC104809007 Tarenaya hassleriana HOM05D007420 ORTHO05D009353 8.2e-06 53.5 70 37.1


User provided reference genes

Program Settings