Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO15G300 Micromonas commoda HOM05D006519 ORTHO05D008306 1.5e-162 576.2 321 100.0
Pp3c21_11830 Physcomitrium patens HOM05D006519 ORTHO05D008306 3.1e-54 216.5 237 54.4
Mapoly0003s0145 Marchantia polymorpha HOM05D006519 ORTHO05D008306 1.9e-48 197.2 237 50.2
Zm00001eb279990 Zea mays HOM05D006519 ORTHO05D008306 2.1e-47 193.7 235 49.8
Gorai.012G002000 Gossypium raimondii HOM05D006519 ORTHO05D008306 3.2e-43 179.9 237 45.6
CANSAT80G0931 Cannabis sativa HOM05D006519 ORTHO05D008306 1.2e-42 177.9 258 45.7
CsaV3_1G008220 Cucumis sativus L. HOM05D006519 ORTHO05D008306 1.6e-42 177.6 237 48.1
Lj4g0003537 Lotus japonicus HOM05D006519 ORTHO05D008306 1.6e-42 177.6 237 45.1
Hund02710 Selenicereus undatus HOM05D006519 ORTHO05D008306 2.1e-42 177.2 237 47.3
ATR0314G030 Amborella trichopoda HOM05D006519 ORTHO05D008306 2.7e-42 176.8 252 45.2
BcaC01g04830 Brassica carinata HOM05D006519 ORTHO05D008306 2.7e-42 176.8 281 41.3
BolC3t15659H Brassica oleracea HOM05D006519 ORTHO05D008306 2.7e-42 176.8 281 41.3
Lalb_Chr07g0182571 Lupinus albus HOM05D006519 ORTHO05D008306 2.7e-42 176.8 239 45.2
C03p33370 Brassica napus HOM05D006519 ORTHO05D008306 3.5e-42 176.4 281 41.3
MELO3C002238.2 Cucumis melo HOM05D006519 ORTHO05D008306 6.0e-42 175.6 237 48.1
AT5G50110 Arabidopsis thaliana HOM05D006519 ORTHO05D008306 7.8e-42 175.3 249 45.4
Carub.0008s1012 Capsella rubella HOM05D006519 ORTHO05D008306 7.8e-42 175.3 247 44.9
CiPaw.11G031700 Carya illinoinensis HOM05D006519 ORTHO05D008306 7.8e-42 175.3 249 46.6
Gohir.D04G001000 Gossypium hirsutum HOM05D006519 ORTHO05D008306 7.8e-42 175.3 237 45.6
TAR629G1196 Trochodendron aralioides HOM05D006519 ORTHO05D008306 1.0e-41 174.9 237 46.4
A03p27660 Brassica napus HOM05D006519 ORTHO05D008306 1.3e-41 174.5 260 42.7
BraA03t11979Z Brassica rapa HOM05D006519 ORTHO05D008306 1.3e-41 174.5 260 42.7
Medtr4g106410 Medicago truncatula HOM05D006519 ORTHO05D008306 1.3e-41 174.5 236 44.1
Sp6g11980 Schrenkiella parvula HOM05D006519 ORTHO05D008306 1.3e-41 174.5 255 44.3
CARHR258520 Cardamine hirsuta HOM05D006519 ORTHO05D008306 1.7e-41 174.1 237 45.6
Glyma.05G033800 Glycine max HOM05D006519 ORTHO05D008306 1.7e-41 174.1 237 44.7
Psat0s1227g0160 Pisum sativum HOM05D006519 ORTHO05D008306 2.3e-41 173.7 237 44.7
BcaB01g02918 Brassica carinata HOM05D006519 ORTHO05D008306 3.0e-41 173.3 265 42.6
Lsat_1_v5_gn_4_73480 Lactuca sativa HOM05D006519 ORTHO05D008306 3.9e-41 172.9 237 45.1
Potri.012G076100 Populus trichocarpa HOM05D006519 ORTHO05D008306 3.9e-41 172.9 254 43.7
Ah.11g046180 Amaranthus hybridus HOM05D006519 ORTHO05D008306 6.6e-41 172.2 239 46.9
Haze_07439 Corylus avellana HOM05D006519 ORTHO05D008306 8.6e-41 171.8 237 46.0
Prupe.5G179000 Prunus persica HOM05D006519 ORTHO05D008306 8.6e-41 171.8 237 46.4
Sed0010209 Sechium edule HOM05D006519 ORTHO05D008306 8.6e-41 171.8 241 46.5
TPR.G37507 Trifolium pratense HOM05D006519 ORTHO05D008306 8.6e-41 171.8 238 44.1
arahy.Tifrunner.gnm1.ann1.IBQC5J Arachis hypogaea HOM05D006519 ORTHO05D008306 1.5e-40 171.0 237 43.0
CSS0018091 Camellia sinensis var. sinensis HOM05D006519 ORTHO05D008306 1.5e-40 171.0 239 47.3
ClCG01G014120 Citrullus lanatus HOM05D006519 ORTHO05D008306 1.5e-40 171.0 249 45.8
HanXRQChr09g0271821 Helianthus annuus HOM05D006519 ORTHO05D008306 1.5e-40 171.0 237 46.0
Gohir.A05G415200 Gossypium hirsutum HOM05D006519 ORTHO05D008306 1.9e-40 170.6 229 45.0
MBI14_g12785_MAGBIO Magnolia biondii HOM05D006519 ORTHO05D008306 1.9e-40 170.6 237 46.0
Nn3g17016 Nelumbo nucifera HOM05D006519 ORTHO05D008306 1.9e-40 170.6 237 46.0
Actinidia34959 Actinidia chinensis HOM05D006519 ORTHO05D008306 2.5e-40 170.2 239 45.2
DCAR_031285 Daucus carota HOM05D006519 ORTHO05D008306 4.3e-40 169.5 239 46.0
Duzib068G0259 Durio zibethinus HOM05D006519 ORTHO05D008306 4.3e-40 169.5 237 45.1
ECA232G3316 Erigeron canadensis HOM05D006519 ORTHO05D008306 4.3e-40 169.5 237 45.6
Sabra12G0054300 Salix brachista HOM05D006519 ORTHO05D008306 4.3e-40 169.5 254 42.9
CSS0037543 Camellia sinensis var. sinensis HOM05D006519 ORTHO05D008306 7.3e-40 168.7 239 46.9
THA.LOC104809258 Tarenaya hassleriana HOM05D006519 ORTHO05D008306 7.3e-40 168.7 251 44.2
FAN13G2537 Fragaria x ananassa HOM05D006519 ORTHO05D008306 9.5e-40 168.3 239 46.9
Nitab4.5_0003386g0010 Nicotiana tabacum HOM05D006519 ORTHO05D008306 9.5e-40 168.3 255 43.9
arahy.Tifrunner.gnm1.ann1.L198ZR Arachis hypogaea HOM05D006519 ORTHO05D008306 1.2e-39 167.9 237 42.6
Ciclev10021480m.g Citrus clementina HOM05D006519 ORTHO05D008306 1.2e-39 167.9 257 42.8
FAN08G1114 Fragaria x ananassa HOM05D006519 ORTHO05D008306 1.6e-39 167.5 237 46.4
PGR083G2560 Punica granatum HOM05D006519 ORTHO05D008306 1.6e-39 167.5 227 46.3
TWI81G0852 Tripterygium wilfordii HOM05D006519 ORTHO05D008306 1.6e-39 167.5 237 43.9
MD06G1181000 Malus domestica HOM05D006519 ORTHO05D008306 2.1e-39 167.2 237 45.6
RcHm_v2.0_Chr7g0179701 Rosa chinensis HOM05D006519 ORTHO05D008306 2.8e-39 166.8 239 47.3
Sc12g0005660 Simmondsia chinensis HOM05D006519 ORTHO05D008306 2.8e-39 166.8 237 44.7
Ca_21889_v3 Cicer arietinum L. HOM05D006519 ORTHO05D008306 4.7e-39 166.0 233 43.3
GSVIVG01007824001 Vitis vinifera HOM05D006519 ORTHO05D008306 4.7e-39 166.0 238 45.0
Cre09.g394584 Chlamydomonas reinhardtii HOM05D006519 ORTHO05D008306 8.1e-39 165.2 308 38.0
FvH4_5g16400 Fragaria vesca HOM05D006519 ORTHO05D008306 8.1e-39 165.2 239 46.4
FAN18G3891 Fragaria x ananassa HOM05D006519 ORTHO05D008306 8.1e-39 165.2 239 46.4
SMO236G0037 Selaginella moellendorffii HOM05D006519 ORTHO05D008306 1.8e-38 164.1 234 43.6
Oeu016332.2 Olea europaea HOM05D006519 ORTHO05D008306 2.3e-38 163.7 239 45.2
Aa31sc174G50 Aethionema arabicum HOM05D006519 ORTHO05D008306 3.1e-38 163.3 251 42.6
PGSC0003DMG400024585 Solanum tuberosum HOM05D006519 ORTHO05D008306 4.0e-38 162.9 239 44.8
Thecc.03G004500 Theobroma cacao HOM05D006519 ORTHO05D008306 5.2e-38 162.5 230 45.2
MSTRG.11426 Avicennia marina HOM05D006519 ORTHO05D008306 6.8e-38 162.2 255 45.1
Solyc03g113860.2 Solanum lycopersicum HOM05D006519 ORTHO05D008306 6.8e-38 162.2 256 43.4
Cc04_g13570 Coffea canephora HOM05D006519 ORTHO05D008306 8.9e-38 161.8 239 44.8
Sopen03g032910 Solanum pennellii HOM05D006519 ORTHO05D008306 1.5e-37 161.0 256 43.4
CAN.G853.13 Capsicum annuum HOM05D006519 ORTHO05D008306 2.0e-37 160.6 257 42.8
Migut.I00056 Erythranthe guttata HOM05D006519 ORTHO05D008306 2.6e-37 160.2 261 42.1
Eucgr.B00339 Eucalyptus grandis HOM05D006519 ORTHO05D008306 4.4e-37 159.5 217 47.0
EL10Ac5g10829 Beta vulgaris HOM05D006519 ORTHO05D008306 7.6e-37 158.7 283 39.2
AUR62008282 Chenopodium quinoa HOM05D006519 ORTHO05D008306 9.9e-37 158.3 226 44.7
AL8G24100 Arabidopsis lyrata HOM05D006519 ORTHO05D008306 1.3e-36 157.9 215 46.0
PSO591G0501 Papaver somniferum HOM05D006519 ORTHO05D008306 1.9e-35 154.1 280 40.4
SalBow5G0752 Salvia bowleyana HOM05D006519 ORTHO05D008306 4.1e-35 152.9 283 39.9
SalBow5G4476 Salvia bowleyana HOM05D006519 ORTHO05D008306 5.4e-35 152.5 283 39.9
Thhalv10014373m.g Eutrema salsugineum HOM05D006519 ORTHO05D008306 7.1e-35 152.1 255 41.6
AagrBONN_evm.TU.Sc2ySwM_228.2029 Anthoceros agrestis HOM05D006519 ORTHO05D008306 4.6e-34 149.4 173 50.9
Phvul.003G197000 Phaseolus vulgaris HOM05D006519 ORTHO05D008306 7.8e-34 148.7 203 46.3
Peaxi162Scf00017g02523 Petunia axillaris HOM05D006519 ORTHO05D008306 3.9e-33 146.4 217 45.2
Atru.chr9.2404 Acer truncatum HOM05D006519 ORTHO05D008306 6.6e-33 145.6 258 39.9
AUR62031043 Chenopodium quinoa HOM05D006519 ORTHO05D008306 8.1e-31 138.7 169 47.3
SGA_v2.0_scaffold467G52031 Striga asiatica HOM05D006519 ORTHO05D008306 3.1e-30 136.7 210 42.4
unitig_62.g23572 Utricularia gibba HOM05D006519 ORTHO05D008306 3.1e-30 136.7 194 44.3
COL.COLO4_04635 Corchorus olitorius HOM05D006519 ORTHO05D008306 7.6e-29 132.1 206 42.2
Hma1.2p1_0002F.1_g002810 Hydrangea macrophylla HOM05D006519 ORTHO05D008306 7.6e-29 132.1 149 51.7
Rhsim12G0161700 Rhododendron simsii HOM05D006519 ORTHO05D008306 8.4e-28 128.6 193 42.5
MD14G1186100 Malus domestica HOM05D006519 ORTHO05D008306 2.4e-22 110.5 170 41.8
HPP92_010835 Vanilla planifolia HOM05D006519 ORTHO05D008306 1.2e-21 108.2 174 40.2
MD13G1183500 Malus domestica HOM05D006519 ORTHO05D008306 4.4e-21 106.3 142 43.7
vmacro16588 Vaccinium macrocarpon HOM05D006519 ORTHO05D008306 4.4e-21 106.3 173 42.8
Manes.06G100700 Manihot esculenta HOM05D006519 ORTHO05D008306 5.8e-21 105.9 152 42.8
MD14G1186900 Malus domestica HOM05D006519 ORTHO05D008306 1.7e-20 104.4 167 44.3
Lj9C454G3 Lonicera japonica HOM05D006519 ORTHO05D008306 1.4e-19 101.3 237 32.1
Hma1.2p1_0002F.1_g002800 Hydrangea macrophylla HOM05D006519 ORTHO05D008306 2.1e-18 97.4 123 44.7
SEGI_15669 Sequoiadendron giganteum HOM05D006519 ORTHO05D008306 6.0e-18 95.9 124 46.0
VMungo1215G1861 Vigna mungo HOM05D006519 ORTHO05D008306 7.8e-18 95.5 169 38.5
Os06g0239000 Oryza sativa ssp. japonica HOM05D006519 ORTHO05D008306 3.0e-17 93.6 103 49.5
Nitab4.5_0001642g0020 Nicotiana tabacum HOM05D006519 ORTHO05D008306 1.9e-16 90.9 137 42.3
PRCOL_00000545 Prasinoderma coloniale HOM05D006519 ORTHO05D008306 1.9e-16 90.9 239 32.6
Cpa.g.sc35.56 Carica papaya HOM05D006519 ORTHO05D008306 9.0e-14 82.0 103 47.6
C05p16930 Brassica napus HOM05D006519 ORTHO05D008306 1.7e-12 77.8 101 42.6
CDE06G0478 Ceratophyllum demersum HOM05D006519 ORTHO05D008306 1.7e-12 77.8 84 47.6
arahy.Tifrunner.gnm1.ann1.KZGX7R Arachis hypogaea HOM05D006519 ORTHO05D008306 6.4e-12 75.9 109 37.6
arahy.Tifrunner.gnm1.ann1.J4WABN Arachis hypogaea HOM05D006519 ORTHO05D008306 1.9e-11 74.3 95 38.9
CBR_g30328 Chara braunii HOM05D000019 ORTHO05D000048 6.0e-10 69.3 103 42.7
Glyma.17G093302 Glycine max HOM05D006519 ORTHO05D008306 1.5e-08 64.7 99 40.4
HanXRQChr11g0328331 Helianthus annuus HOM05D006519 ORTHO05D008306 3.3e-08 63.5 87 41.4
Nitab4.5_0001642g0010 Nicotiana tabacum HOM05D006519 ORTHO05D008306 7.4e-08 62.4 106 42.5
arahy.Tifrunner.gnm1.ann1.9L22J7 Arachis hypogaea HOM05D006519 ORTHO05D014446 3.7e-07 60.1 104 32.7
Actinidia19081 Actinidia chinensis HOM05D006519 ORTHO05D008306 1.8e-06 57.8 141 32.6
arahy.Tifrunner.gnm1.ann1.RNN7F2 Arachis hypogaea HOM05D006519 ORTHO05D008306 2.4e-06 57.4 80 43.8
BcaC05g25762 Brassica carinata HOM05D006519 ORTHO05D008306 9.0e-06 55.5 82 39.0
SEGI_16810 Sequoiadendron giganteum HOM05D006519 ORTHO05D008306 9.0e-06 55.5 46 65.2


User provided reference genes

Program Settings