Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO15G282 Micromonas commoda HOM05D005628 ORTHO05D007348 1.1e-201 706.4 359 100.0
PRCOL_00006430 Prasinoderma coloniale HOM05D005628 ORTHO05D007348 5.8e-54 215.7 360 36.1
Cre14.g624201 Chlamydomonas reinhardtii HOM05D005628 ORTHO05D007348 7.9e-27 125.6 354 27.7
DCAR_009514 Daucus carota HOM05D005628 ORTHO05D007348 8.2e-24 115.5 294 27.2
CBR_g26413 Chara braunii HOM05D005628 ORTHO05D007348 4.1e-23 113.2 269 27.5
THA.LOC104811445 Tarenaya hassleriana HOM05D005628 ORTHO05D007348 4.5e-22 109.8 280 26.8
Hma1.2p1_1598F.1_g292970 Hydrangea macrophylla HOM05D005628 ORTHO05D007348 1.0e-21 108.6 280 26.4
Ca_13486_v3 Cicer arietinum L. HOM05D005628 ORTHO05D007348 2.9e-21 107.1 311 25.7
PSO017G6535 Papaver somniferum HOM05D005628 ORTHO05D007348 2.9e-21 107.1 288 27.1
Dinv31894 Davidia involucrata HOM05D005628 ORTHO05D007348 5.0e-21 106.3 280 27.1
ATR0661G503 Amborella trichopoda HOM05D005628 ORTHO05D007348 1.1e-20 105.1 280 26.4
Atru.chr13.215 Acer truncatum HOM05D005628 ORTHO05D007348 1.4e-20 104.8 285 26.7
MD08G1007500 Malus domestica HOM05D005628 ORTHO05D007348 1.4e-20 104.8 293 24.6
Ciclev10001692m.g Citrus clementina HOM05D005628 ORTHO05D007348 1.9e-20 104.4 280 25.4
Rhsim07G0251100 Rhododendron simsii HOM05D005628 ORTHO05D007348 2.5e-20 104.0 304 25.0
Os07g0476900 Oryza sativa ssp. japonica HOM05D005628 ORTHO05D007348 3.2e-20 103.6 280 26.1
SEGI_09368 Sequoiadendron giganteum HOM05D005628 ORTHO05D007348 3.2e-20 103.6 300 25.0
COL.COLO4_26082 Corchorus olitorius HOM05D005628 ORTHO05D007348 4.2e-20 103.2 280 26.4
Lj5g0010043 Lotus japonicus HOM05D005628 ORTHO05D007348 4.2e-20 103.2 311 26.4
Nn5g30848 Nelumbo nucifera HOM05D005628 ORTHO05D007348 4.2e-20 103.2 313 25.9
MD15G1006700 Malus domestica HOM05D005628 ORTHO05D007348 5.5e-20 102.8 280 25.4
Mapoly0024s0029 Marchantia polymorpha HOM05D005628 ORTHO05D007348 5.5e-20 102.8 279 25.1
MSTRG.25277 Avicennia marina HOM05D005628 ORTHO05D007348 7.2e-20 102.4 290 24.8
AUR62036715 Chenopodium quinoa HOM05D005628 ORTHO05D007348 7.2e-20 102.4 285 26.7
Medtr1g026125 Medicago truncatula HOM05D005628 ORTHO05D007348 7.2e-20 102.4 280 26.4
PGR031G3420 Punica granatum HOM05D005628 ORTHO05D007348 7.2e-20 102.4 297 26.6
Lalb_Chr03g0033571 Lupinus albus HOM05D005628 ORTHO05D007348 9.4e-20 102.1 280 25.4
MBI05_g13277_MAGBIO Magnolia biondii HOM05D005628 ORTHO05D007348 9.4e-20 102.1 319 25.1
PSO170G4881 Papaver somniferum HOM05D005628 ORTHO05D007348 9.4e-20 102.1 280 25.7
Potri.005G245700 Populus trichocarpa HOM05D005628 ORTHO05D007348 9.4e-20 102.1 280 25.7
CiPaw.07G143500 Carya illinoinensis HOM05D005628 ORTHO05D007348 1.2e-19 101.7 285 25.3
TAR376G1006 Trochodendron aralioides HOM05D005628 ORTHO05D007348 1.6e-19 101.3 285 24.9
vmacro04380 Vaccinium macrocarpon HOM05D005628 ORTHO05D007348 1.6e-19 101.3 308 24.7
arahy.Tifrunner.gnm1.ann1.KUZ5B2 Arachis hypogaea HOM05D005628 ORTHO05D007348 2.7e-19 100.5 280 26.8
HPP92_014531 Vanilla planifolia HOM05D005628 ORTHO05D007348 2.7e-19 100.5 280 26.1
Cfa014012 Carpinus fangiana HOM05D005628 ORTHO05D007348 3.6e-19 100.1 285 24.6
PSO210G2114 Papaver somniferum HOM05D005628 ORTHO05D007348 3.6e-19 100.1 280 25.7
Lj4C17T5 Lonicera japonica HOM05D005628 ORTHO05D007348 6.1e-19 99.4 288 24.0
PSO170G2194 Papaver somniferum HOM05D005628 ORTHO05D007348 6.1e-19 99.4 288 25.0
ECA232G2943 Erigeron canadensis HOM05D005628 ORTHO05D007348 1.0e-18 98.6 286 24.5
Manes.05G142400 Manihot esculenta HOM05D005628 ORTHO05D007348 1.0e-18 98.6 290 24.5
Oeu007384.1 Olea europaea HOM05D005628 ORTHO05D007348 1.0e-18 98.6 280 24.6
TWI56G0240 Tripterygium wilfordii HOM05D005628 ORTHO05D007348 1.4e-18 98.2 280 25.0
arahy.Tifrunner.gnm1.ann1.W1N14J Arachis hypogaea HOM05D005628 ORTHO05D007348 1.8e-18 97.8 280 26.4
Gohir.D05G185700 Gossypium hirsutum HOM05D005628 ORTHO05D007348 1.8e-18 97.8 280 25.0
Gorai.009G191100 Gossypium raimondii HOM05D005628 ORTHO05D007348 1.8e-18 97.8 280 25.0
Sabra05G0189800 Salix brachista HOM05D005628 ORTHO05D007348 1.8e-18 97.8 280 25.4
Thecc.08G051900 Theobroma cacao HOM05D005628 ORTHO05D007348 1.8e-18 97.8 280 25.0
Gohir.A05G182700 Gossypium hirsutum HOM05D005628 ORTHO05D007348 2.3e-18 97.4 280 25.0
Psat6g000840 Pisum sativum HOM05D005628 ORTHO05D007348 2.3e-18 97.4 280 26.1
Hund01723 Selenicereus undatus HOM05D005628 ORTHO05D007348 2.3e-18 97.4 289 24.9
Zm00001eb319950 Zea mays HOM05D005628 ORTHO05D007348 2.3e-18 97.4 312 26.0
Actinidia29770 Actinidia chinensis HOM05D005628 ORTHO05D007348 3.0e-18 97.1 280 25.4
RcHm_v2.0_Chr6g0303681 Rosa chinensis HOM05D005628 ORTHO05D007348 3.0e-18 97.1 280 23.6
EL10Ac1g02081 Beta vulgaris HOM05D005628 ORTHO05D007348 3.9e-18 96.7 280 25.4
Haze_22711 Corylus avellana HOM05D005628 ORTHO05D007348 3.9e-18 96.7 285 24.2
QL02p012950 Quercus lobata HOM05D005628 ORTHO05D007348 3.9e-18 96.7 286 24.5
Sed0003076 Sechium edule HOM05D005628 ORTHO05D007348 5.1e-18 96.3 280 24.6
Sc15g0004660 Simmondsia chinensis HOM05D005628 ORTHO05D007348 6.7e-18 95.9 303 24.1
SGA_v2.0_scaffold145G36102 Striga asiatica HOM05D005628 ORTHO05D007348 8.8e-18 95.5 275 26.2
CANSAT64G0481 Cannabis sativa HOM05D005628 ORTHO05D007348 1.5e-17 94.7 280 23.6
CiPaw.08G069300 Carya illinoinensis HOM05D005628 ORTHO05D007348 1.5e-17 94.7 263 26.6
Aqoxy5G01095 Aquilegia oxysepala HOM05D005628 ORTHO05D007348 2.0e-17 94.4 286 24.5
Prupe.1G359300 Prunus persica HOM05D005628 ORTHO05D007348 2.0e-17 94.4 280 24.3
CAN.G311.75 Capsicum annuum HOM05D005628 ORTHO05D007348 3.3e-17 93.6 280 23.6
Migut.C00901 Erythranthe guttata HOM05D005628 ORTHO05D007348 3.3e-17 93.6 287 24.7
Lsat_1_v5_gn_0_661 Lactuca sativa HOM05D005628 ORTHO05D007348 3.3e-17 93.6 273 25.3
PGSC0003DMG400009956 Solanum tuberosum HOM05D005628 ORTHO05D007348 3.3e-17 93.6 278 23.0
Solyc04g081970.3 Solanum lycopersicum HOM05D005628 ORTHO05D007348 4.4e-17 93.2 278 23.0
Sopen04g035620 Solanum pennellii HOM05D005628 ORTHO05D007348 4.4e-17 93.2 278 23.0
Cpa.g.sc26.263 Carica papaya HOM05D005628 ORTHO05D007348 5.7e-17 92.8 280 24.3
Cc10_g01120 Coffea canephora HOM05D005628 ORTHO05D007348 5.7e-17 92.8 280 25.4
Duzib116G0718 Durio zibethinus HOM05D005628 ORTHO05D007348 5.7e-17 92.8 272 24.3
Sp5g31200 Schrenkiella parvula HOM05D005628 ORTHO05D007348 5.7e-17 92.8 280 23.9
TWI36G0492 Tripterygium wilfordii HOM05D005628 ORTHO05D007348 5.7e-17 92.8 280 23.9
AT1G76080 Arabidopsis thaliana HOM05D005628 ORTHO05D007348 9.7e-17 92.0 281 26.0
CsaV3_2G024440 Cucumis sativus L. HOM05D005628 ORTHO05D007348 9.7e-17 92.0 312 24.4
FAN27G2668 Fragaria x ananassa HOM05D005628 ORTHO05D007348 9.7e-17 92.0 290 23.1
AL2G36120 Arabidopsis lyrata HOM05D005628 ORTHO05D007348 1.3e-16 91.7 281 26.0
CSS0034642 Camellia sinensis var. sinensis HOM05D005628 ORTHO05D007348 1.3e-16 91.7 280 23.6
Thhalv10018920m.g Eutrema salsugineum HOM05D005628 ORTHO05D007348 1.3e-16 91.7 323 25.4
HanXRQChr05g0146641 Helianthus annuus HOM05D005628 ORTHO05D007348 1.3e-16 91.7 286 24.1
VMungo0647G1170 Vigna mungo HOM05D005628 ORTHO05D007348 1.3e-16 91.7 274 24.5
AUR62013879 Chenopodium quinoa HOM05D005628 ORTHO05D007348 2.2e-16 90.9 229 27.1
Carub.0002s2297 Capsella rubella HOM05D005628 ORTHO05D007348 2.8e-16 90.5 281 26.0
FvH4_2g37930 Fragaria vesca HOM05D005628 ORTHO05D007348 2.8e-16 90.5 290 22.8
A07p41640 Brassica napus HOM05D005628 ORTHO05D007348 3.7e-16 90.1 280 24.3
C06p50020 Brassica napus HOM05D005628 ORTHO05D007348 3.7e-16 90.1 280 24.3
FAN15G2092 Fragaria x ananassa HOM05D005628 ORTHO05D007348 4.8e-16 89.7 290 23.1
FAN20G0939 Fragaria x ananassa HOM05D005628 ORTHO05D007348 4.8e-16 89.7 290 22.8
PSO648G0024 Papaver somniferum HOM05D005628 ORTHO05D007348 4.8e-16 89.7 274 24.8
PSO648G0070 Papaver somniferum HOM05D005628 ORTHO05D007348 4.8e-16 89.7 274 24.8
PSO648G0080 Papaver somniferum HOM05D005628 ORTHO05D007348 4.8e-16 89.7 274 24.8
PSO795G0001 Papaver somniferum HOM05D005628 ORTHO05D007348 4.8e-16 89.7 274 24.8
Aa31LG4G6200 Aethionema arabicum HOM05D005628 ORTHO05D007348 6.3e-16 89.4 280 23.6
BolC6t40041H Brassica oleracea HOM05D005628 ORTHO05D007348 6.3e-16 89.4 280 23.9
BraA07t31693Z Brassica rapa HOM05D005628 ORTHO05D007348 8.2e-16 89.0 317 24.0
Glyma.14G222500 Glycine max HOM05D005628 ORTHO05D007348 8.2e-16 89.0 311 23.2
ClCG08G014020 Citrullus lanatus HOM05D005628 ORTHO05D007348 1.4e-15 88.2 280 23.6
Phvul.001G002100 Phaseolus vulgaris HOM05D005628 ORTHO05D007348 1.4e-15 88.2 273 23.8
PSO339G4729 Papaver somniferum HOM05D005628 ORTHO05D007348 1.8e-15 87.8 273 25.3
Pp3c13_21520 Physcomitrium patens HOM05D005628 ORTHO05D007348 3.1e-15 87.0 223 23.3
BcaC08g47300 Brassica carinata HOM05D005628 ORTHO05D007348 4.1e-15 86.7 280 23.6
CARHR069620 Cardamine hirsuta HOM05D005628 ORTHO05D007348 4.1e-15 86.7 281 25.3
TPR.G26414 Trifolium pratense HOM05D005628 ORTHO05D007348 4.1e-15 86.7 256 25.8
unitig_749.g13905 Utricularia gibba HOM05D005628 ORTHO05D007348 4.1e-15 86.7 344 23.5
BcaC08g47301 Brassica carinata HOM05D005628 ORTHO05D007348 5.3e-15 86.3 242 25.2
MELO3C011340.2 Cucumis melo HOM05D005628 ORTHO05D007348 5.3e-15 86.3 278 24.1
Lj9P400T45 Lonicera japonica HOM05D005628 ORTHO05D007348 9.1e-15 85.5 271 24.4
BcaC08g47294 Brassica carinata HOM05D005628 ORTHO05D007348 1.2e-11 75.1 280 23.2
Peaxi162Scf00174g00813 Petunia axillaris HOM05D005628 ORTHO05D007348 1.6e-11 74.7 181 26.0
CDE02G2619 Ceratophyllum demersum HOM05D005628 ORTHO05D007348 3.6e-11 73.6 207 24.6
Nitab4.5_0003030g0070 Nicotiana tabacum HOM05D005628 ORTHO05D007348 3.6e-11 73.6 181 25.4
Ah.00g000640 Amaranthus hybridus HOM05D005628 ORTHO05D007348 6.7e-10 69.3 161 28.6
Migut.B00054 Erythranthe guttata HOM05D005628 ORTHO05D007348 8.8e-10 68.9 231 26.4
BcaC03g15644 Brassica carinata HOM05D005628 ORTHO05D007348 8.2e-08 62.4 157 25.5
A02p20420 Brassica napus HOM05D005628 ORTHO05D007348 1.1e-07 62.0 112 29.5
C02p33470 Brassica napus HOM05D005628 ORTHO05D007348 1.8e-07 61.2 98 29.6
BolC2t09357H Brassica oleracea HOM05D005628 ORTHO05D007348 1.8e-07 61.2 157 26.1


User provided reference genes

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