Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO15G246 Micromonas commoda HOM05D007149 ORTHO05D008956 7.7e-58 226.9 109 100.0
CDE11G0018 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 2.0e-13 79.3 71 49.3
AagrBONN_evm.TU.Sc2ySwM_228.1220 Anthoceros agrestis HOM05D007149 ORTHO05D008956 5.8e-13 77.8 69 47.8
PGR004G0481 Punica granatum HOM05D007149 ORTHO05D008956 5.8e-13 77.8 77 44.2
Ca_13737_v3 Cicer arietinum L. HOM05D007149 ORTHO05D008956 7.5e-13 77.4 71 47.9
Actinidia15873 Actinidia chinensis HOM05D007149 ORTHO05D008956 1.3e-12 76.6 71 47.9
CAN.G953.15 Capsicum annuum HOM05D007149 ORTHO05D008956 1.3e-12 76.6 72 47.2
Peaxi162Scf00501g00121 Petunia axillaris HOM05D007149 ORTHO05D008956 1.7e-12 76.3 71 46.5
Sabra17G0093700 Salix brachista HOM05D007149 ORTHO05D008956 1.7e-12 76.3 70 45.7
Psat1g079040 Pisum sativum HOM05D007149 ORTHO05D008956 2.2e-12 75.9 70 48.6
QL02p051591 Quercus lobata HOM05D007149 ORTHO05D008956 2.2e-12 75.9 71 45.1
ATR0665G039 Amborella trichopoda HOM05D007149 ORTHO05D008956 2.9e-12 75.5 71 45.1
Dinv34841 Davidia involucrata HOM05D007149 ORTHO05D008956 2.9e-12 75.5 80 43.8
Nn4g23775 Nelumbo nucifera HOM05D007149 ORTHO05D008956 2.9e-12 75.5 71 47.9
Sc11g0008240 Simmondsia chinensis HOM05D007149 ORTHO05D008956 2.9e-12 75.5 70 47.1
Solyc02g063085.1 Solanum lycopersicum HOM05D007149 ORTHO05D008956 2.9e-12 75.5 71 46.5
Thecc.04G136400 Theobroma cacao HOM05D007149 ORTHO05D008956 2.9e-12 75.5 70 48.6
GSVIVG01031069001 Vitis vinifera HOM05D007149 ORTHO05D008956 2.9e-12 75.5 72 43.1
CiPaw.04G040600 Carya illinoinensis HOM05D007149 ORTHO05D008956 3.7e-12 75.1 71 45.1
Glyma.19G046200 Glycine max HOM05D007149 ORTHO05D008956 3.7e-12 75.1 71 46.5
Gohir.A07G071500 Gossypium hirsutum HOM05D007149 ORTHO05D008956 3.7e-12 75.1 71 46.5
Gohir.D07G076000 Gossypium hirsutum HOM05D007149 ORTHO05D008956 3.7e-12 75.1 71 46.5
Gorai.001G080200 Gossypium raimondii HOM05D007149 ORTHO05D008956 3.7e-12 75.1 71 46.5
Lj2g0020616 Lotus japonicus HOM05D007149 ORTHO05D008956 3.7e-12 75.1 71 45.1
Aa31LG11G13550 Aethionema arabicum HOM05D007149 ORTHO05D008956 4.9e-12 74.7 71 47.9
CSS0003707 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 4.9e-12 74.7 71 45.1
Hma1.2p1_0550F.1_g177300 Hydrangea macrophylla HOM05D007149 ORTHO05D008956 4.9e-12 74.7 71 45.1
MD07G1095900 Malus domestica HOM05D007149 ORTHO05D008956 4.9e-12 74.7 71 46.5
MD17G1105000 Malus domestica HOM05D007149 ORTHO05D008956 4.9e-12 74.7 71 46.5
Potri.017G113401 Populus trichocarpa HOM05D007149 ORTHO05D008956 4.9e-12 74.7 70 45.7
Hund13727 Selenicereus undatus HOM05D007149 ORTHO05D008956 4.9e-12 74.7 71 43.7
Actinidia36312 Actinidia chinensis HOM05D007149 ORTHO05D008956 6.4e-12 74.3 71 46.5
Manes.01G108800 Manihot esculenta HOM05D007149 ORTHO05D008956 6.4e-12 74.3 71 43.7
vmacro05569 Vaccinium macrocarpon HOM05D007149 ORTHO05D008956 6.4e-12 74.3 68 47.1
Cpa.g.sc179.16 Carica papaya HOM05D007149 ORTHO05D008956 8.3e-12 73.9 71 46.5
DCAR_017207 Daucus carota HOM05D007149 ORTHO05D008956 8.3e-12 73.9 70 47.1
Phvul.004G064400 Phaseolus vulgaris HOM05D007149 ORTHO05D008956 8.3e-12 73.9 71 45.1
Ciclev10013207m.g Citrus clementina HOM05D007149 ORTHO05D008956 1.1e-11 73.6 71 43.7
Ah.10g037580 Amaranthus hybridus HOM05D007149 ORTHO05D008956 1.4e-11 73.2 71 45.1
CANSAT64G1005 Cannabis sativa HOM05D007149 ORTHO05D008956 1.4e-11 73.2 71 45.1
Os03g0257900 Oryza sativa ssp. japonica HOM05D007149 ORTHO05D008956 1.4e-11 73.2 71 46.5
unitig_899.g14509 Utricularia gibba HOM05D007149 ORTHO05D008956 1.4e-11 73.2 74 43.2
EL10Ac2g04594 Beta vulgaris HOM05D007149 ORTHO05D008956 1.9e-11 72.8 71 45.1
CSS0003918 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 1.9e-11 72.8 71 43.7
Cfa007939 Carpinus fangiana HOM05D007149 ORTHO05D008956 1.9e-11 72.8 71 43.7
FvH4_6g45250 Fragaria vesca HOM05D007149 ORTHO05D008956 1.9e-11 72.8 71 43.7
FAN09G4869 Fragaria x ananassa HOM05D007149 ORTHO05D008956 1.9e-11 72.8 71 43.7
FAN14G5255 Fragaria x ananassa HOM05D007149 ORTHO05D008956 1.9e-11 72.8 71 43.7
RcHm_v2.0_Chr2g0162971 Rosa chinensis HOM05D007149 ORTHO05D008956 1.9e-11 72.8 71 43.7
PGSC0003DMG400024179 Solanum tuberosum HOM05D007149 ORTHO05D008956 1.9e-11 72.8 67 44.8
Zm00001eb011230 Zea mays HOM05D007149 ORTHO05D008956 1.9e-11 72.8 71 45.1
arahy.Tifrunner.gnm1.ann1.2T9F1Z Arachis hypogaea HOM05D007149 ORTHO05D008956 2.4e-11 72.4 74 43.2
arahy.Tifrunner.gnm1.ann1.HVR4ZG Arachis hypogaea HOM05D007149 ORTHO05D008956 2.4e-11 72.4 74 43.2
CiPaw.03G060400 Carya illinoinensis HOM05D007149 ORTHO05D008956 2.4e-11 72.4 70 45.7
Medtr0024s0060 Medicago truncatula HOM05D007149 ORTHO05D008956 2.4e-11 72.4 70 47.1
Nn3g17784 Nelumbo nucifera HOM05D007149 ORTHO05D008956 2.4e-11 72.4 67 46.3
SMO356G0237 Selaginella moellendorffii HOM05D007149 ORTHO05D008956 2.4e-11 72.4 72 48.6
HPP92_011090 Vanilla planifolia HOM05D007149 ORTHO05D008956 2.4e-11 72.4 71 46.5
COL.COLO4_16183 Corchorus olitorius HOM05D007149 ORTHO05D008956 3.2e-11 72.0 71 45.1
Sp6g28070 Schrenkiella parvula HOM05D007149 ORTHO05D008956 3.2e-11 72.0 71 45.1
Eucgr.J01478 Eucalyptus grandis HOM05D007149 ORTHO05D008956 4.1e-11 71.6 70 45.7
AL6G26940 Arabidopsis lyrata HOM05D007149 ORTHO05D008956 5.4e-11 71.2 71 43.7
Carub.0006s1425 Capsella rubella HOM05D007149 ORTHO05D008956 5.4e-11 71.2 71 43.7
CARHR197250 Cardamine hirsuta HOM05D007149 ORTHO05D008956 5.4e-11 71.2 71 43.7
Thhalv10015129m.g Eutrema salsugineum HOM05D007149 ORTHO05D008956 5.4e-11 71.2 81 42.0
PRCOL_00003753 Prasinoderma coloniale HOM05D007149 ORTHO05D008956 5.4e-11 71.2 79 43.0
THA.LOC104803005 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 5.4e-11 71.2 70 44.3
AT5G16060 Arabidopsis thaliana HOM05D007149 ORTHO05D008956 7.0e-11 70.9 71 43.7
Cc07_g08920 Coffea canephora HOM05D007149 ORTHO05D008956 7.0e-11 70.9 68 47.1
CsaV3_5G039180 Cucumis sativus L. HOM05D007149 ORTHO05D008956 7.0e-11 70.9 78 42.3
TWI74G0718 Tripterygium wilfordii HOM05D007149 ORTHO05D008956 7.0e-11 70.9 71 43.7
Atru.chr8.867 Acer truncatum HOM05D007149 ORTHO05D008956 9.2e-11 70.5 71 42.3
BcaC04g18912 Brassica carinata HOM05D007149 ORTHO05D008956 9.2e-11 70.5 71 45.1
A10p23000 Brassica napus HOM05D007149 ORTHO05D008956 9.2e-11 70.5 71 45.1
C09p60970 Brassica napus HOM05D007149 ORTHO05D008956 9.2e-11 70.5 71 45.1
BolC9t58944H Brassica oleracea HOM05D007149 ORTHO05D008956 9.2e-11 70.5 71 45.1
BraA10t44369Z Brassica rapa HOM05D007149 ORTHO05D008956 9.2e-11 70.5 71 45.1
Migut.H00206 Erythranthe guttata HOM05D007149 ORTHO05D008956 9.2e-11 70.5 71 43.7
BcaB08g36883 Brassica carinata HOM05D007149 ORTHO05D008956 1.2e-10 70.1 70 45.7
Lalb_Chr04g0257361 Lupinus albus HOM05D007149 ORTHO05D008956 1.2e-10 70.1 71 45.1
THA.LOC104827153 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 1.2e-10 70.1 71 43.7
PSO782G5258 Papaver somniferum HOM05D007149 ORTHO05D008956 1.6e-10 69.7 70 44.3
PSO063G3907 Papaver somniferum HOM05D007149 ORTHO05D008956 2.0e-10 69.3 70 44.3
MELO3C022093.2 Cucumis melo HOM05D007149 ORTHO05D008956 2.7e-10 68.9 70 44.3
Lsat_1_v5_gn_3_78860 Lactuca sativa HOM05D007149 ORTHO05D008956 2.7e-10 68.9 70 44.3
Sopen02g014160 Solanum pennellii HOM05D007149 ORTHO05D008956 2.7e-10 68.9 59 47.5
HanXRQChr12g0376461 Helianthus annuus HOM05D007149 ORTHO05D008956 3.5e-10 68.6 70 44.3
Nitab4.5_0001569g0020 Nicotiana tabacum HOM05D007149 ORTHO05D008956 3.5e-10 68.6 59 45.8
Prupe.3G238900 Prunus persica HOM05D007149 ORTHO05D008956 3.5e-10 68.6 59 47.5
Aa31LG2G17140 Aethionema arabicum HOM05D007149 ORTHO05D008956 4.6e-10 68.2 59 49.2
Sed0025185 Sechium edule HOM05D007149 ORTHO05D008956 4.6e-10 68.2 70 42.9
Aqoxy3G03934 Aquilegia oxysepala HOM05D007149 ORTHO05D008956 6.0e-10 67.8 70 42.9
FAN09G3419 Fragaria x ananassa HOM05D007149 ORTHO05D008956 1.0e-09 67.0 78 37.2
FAN02G3200 Fragaria x ananassa HOM05D007149 ORTHO05D008956 1.7e-09 66.2 59 44.1
AUR62014527 Chenopodium quinoa HOM05D007149 ORTHO05D008956 2.3e-09 65.9 59 45.8
SalBow6G3599 Salvia bowleyana HOM05D007149 ORTHO05D008956 2.3e-09 65.9 59 44.1
Mapoly0073s0075 Marchantia polymorpha HOM05D007149 ORTHO05D008956 5.0e-09 64.7 59 45.8
SHI30170 Sapria himalayana HOM05D007149 ORTHO05D008956 1.1e-08 63.5 56 48.2
CDE05G2183 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 1.9e-08 62.8 56 50.0
Pp3c20_17910 Physcomitrium patens HOM05D007149 ORTHO05D008956 4.3e-08 61.6 68 39.7
TPR.G32450 Trifolium pratense HOM05D007149 ORTHO05D008956 4.3e-08 61.6 56 50.0
Haze_14138 Corylus avellana HOM05D007149 ORTHO05D008956 7.3e-08 60.8 58 44.8
ECA246G4376 Erigeron canadensis HOM05D007149 ORTHO05D008956 1.2e-07 60.1 58 43.1
SalBow3G3356 Salvia bowleyana HOM05D007149 ORTHO05D008956 2.1e-07 59.3 57 45.6
Duzib133G0440 Durio zibethinus HOM05D007149 ORTHO05D008956 3.6e-07 58.5 56 46.4
HPP92_011107 Vanilla planifolia HOM05D007149 ORTHO05D008956 4.7e-07 58.2 56 48.2
Carub.0055s0008 Capsella rubella HOM05D007149 ORTHO05D008956 8.0e-07 57.4 56 44.6
ClCG11G005400 Citrullus lanatus HOM05D007149 ORTHO05D008956 8.9e-06 53.9 55 43.6


User provided reference genes

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