Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO15G227 Micromonas commoda HOM05D006191 ORTHO05D007660 2.1e-50 202.2 111 100.0
CDE02G2705 Ceratophyllum demersum HOM05D006191 ORTHO05D007660 4.3e-16 88.2 67 70.1
Nn7g36644 Nelumbo nucifera HOM05D000965 ORTHO05D000842 4.3e-16 88.2 101 52.5
PRCOL_00002293 Prasinoderma coloniale HOM05D006191 ORTHO05D007660 4.3e-16 88.2 72 56.9
Glyma.08G302200 Glycine max HOM05D006191 ORTHO05D007660 1.6e-15 86.3 67 68.7
AagrBONN_evm.TU.Sc2ySwM_362.136 Anthoceros agrestis HOM05D006191 ORTHO05D007660 2.8e-15 85.5 67 70.1
Pp3c9_12820 Physcomitrium patens HOM05D006191 ORTHO05D007660 2.8e-15 85.5 69 63.8
Lj6g0026433 Lotus japonicus HOM05D006191 ORTHO05D007660 3.7e-15 85.1 67 67.2
Nn2g14883 Nelumbo nucifera HOM05D006191 ORTHO05D007660 3.7e-15 85.1 67 67.2
Pp3c15_6032 Physcomitrium patens HOM05D006191 ORTHO05D007660 3.7e-15 85.1 69 63.8
TPR.G8494 Trifolium pratense HOM05D006191 ORTHO05D007660 3.7e-15 85.1 67 68.7
Ciclev10017371m.g Citrus clementina HOM05D006191 ORTHO05D007660 6.3e-15 84.3 73 63.0
Medtr3g434780 Medicago truncatula HOM05D006191 ORTHO05D007660 6.3e-15 84.3 67 68.7
Prupe.4G268400 Prunus persica HOM05D006191 ORTHO05D007660 6.3e-15 84.3 75 62.7
Atru.chr12.1349 Acer truncatum HOM05D006191 ORTHO05D007660 8.2e-15 84.0 67 68.7
Atru.chr3.2798 Acer truncatum HOM05D006191 ORTHO05D007660 8.2e-15 84.0 73 63.0
Thecc.10G162100 Theobroma cacao HOM05D006191 ORTHO05D007660 8.2e-15 84.0 67 68.7
Carub.0003s0749 Capsella rubella HOM05D006191 ORTHO05D007660 1.1e-14 83.6 73 60.3
MBI13_g01622_MAGBIO Magnolia biondii HOM05D006191 ORTHO05D007660 1.4e-14 83.2 67 67.2
MD00G1126200 Malus domestica HOM05D006191 ORTHO05D007660 1.4e-14 83.2 73 63.0
MD00G1154200 Malus domestica HOM05D006191 ORTHO05D007660 1.4e-14 83.2 73 63.0
Cre01.g010500 Chlamydomonas reinhardtii HOM05D006191 ORTHO05D007660 1.8e-14 82.8 73 47.9
COL.COLO4_04799 Corchorus olitorius HOM05D006191 ORTHO05D007660 1.8e-14 82.8 68 64.7
Manes.01G180500 Manihot esculenta HOM05D006191 ORTHO05D007660 1.8e-14 82.8 67 67.2
A03p35550 Brassica napus HOM05D006191 ORTHO05D007660 3.1e-14 82.0 67 62.7
C03p43190 Brassica napus HOM05D006191 ORTHO05D007660 3.1e-14 82.0 67 62.7
BolC3t16588H Brassica oleracea HOM05D006191 ORTHO05D007660 3.1e-14 82.0 67 62.7
BraA03t12731Z Brassica rapa HOM05D006191 ORTHO05D007660 3.1e-14 82.0 67 62.7
DCAR_002114 Daucus carota HOM05D006191 ORTHO05D007660 4.1e-14 81.6 67 65.7
Lalb_Chr07g0183161 Lupinus albus HOM05D006191 ORTHO05D007660 4.1e-14 81.6 67 67.2
Sp3g06830 Schrenkiella parvula HOM05D006191 ORTHO05D007660 4.1e-14 81.6 73 57.5
Mapoly0046s0044 Marchantia polymorpha HOM05D006191 ORTHO05D007660 5.3e-14 81.3 67 67.2
BcaB04g21265 Brassica carinata HOM05D006191 ORTHO05D007660 6.9e-14 80.9 67 62.7
Oeu030629.1 Olea europaea HOM05D006191 ORTHO05D007660 6.9e-14 80.9 67 65.7
PSO339G4970 Papaver somniferum HOM05D006191 ORTHO05D007660 6.9e-14 80.9 67 65.7
PSO384G4772 Papaver somniferum HOM05D006191 ORTHO05D007660 6.9e-14 80.9 67 65.7
Aqoxy2G00346 Aquilegia oxysepala HOM05D006191 ORTHO05D007660 9.0e-14 80.5 67 59.7
CSS0014439 Camellia sinensis var. sinensis HOM05D006191 ORTHO05D007660 9.0e-14 80.5 67 65.7
Duzib106G0217 Durio zibethinus HOM05D006191 ORTHO05D007660 9.0e-14 80.5 67 65.7
Duzib128G0357 Durio zibethinus HOM05D006191 ORTHO05D007660 9.0e-14 80.5 67 65.7
Glyma.18G117700 Glycine max HOM05D006191 ORTHO05D007660 9.0e-14 80.5 66 68.2
Gohir.A10G183900 Gossypium hirsutum HOM05D006191 ORTHO05D007660 9.0e-14 80.5 67 65.7
Gohir.D10G191200 Gossypium hirsutum HOM05D006191 ORTHO05D007660 9.0e-14 80.5 67 65.7
Gohir.D13G004600 Gossypium hirsutum HOM05D006191 ORTHO05D007660 9.0e-14 80.5 67 65.7
Gorai.011G214000 Gossypium raimondii HOM05D006191 ORTHO05D007660 9.0e-14 80.5 67 65.7
Oeu001494.1 Olea europaea HOM05D006191 ORTHO05D007660 9.0e-14 80.5 67 65.7
PGR031G0246 Punica granatum HOM05D006191 ORTHO05D007660 9.0e-14 80.5 67 65.7
SMO301G0059 Selaginella moellendorffii HOM05D006191 ORTHO05D007660 9.0e-14 80.5 67 65.7
TWI38G0245 Tripterygium wilfordii HOM05D006191 ORTHO05D007660 9.0e-14 80.5 67 65.7
TWI63G0884 Tripterygium wilfordii HOM05D006191 ORTHO05D007660 9.0e-14 80.5 67 65.7
TAR623G0607 Trochodendron aralioides HOM05D006191 ORTHO05D007660 9.0e-14 80.5 67 65.7
BolC5t34598H Brassica oleracea HOM05D006191 ORTHO05D007660 1.2e-13 80.1 73 54.8
Eucgr.J01186 Eucalyptus grandis HOM05D006191 ORTHO05D007660 1.2e-13 80.1 67 64.2
Hma1.2p1_0115F.1_g055930 Hydrangea macrophylla HOM05D006191 ORTHO05D007660 1.2e-13 80.1 67 65.7
Potri.009G071900 Populus trichocarpa HOM05D006191 ORTHO05D007660 1.2e-13 80.1 67 65.7
Sabra09G0054200 Salix brachista HOM05D006191 ORTHO05D007660 1.2e-13 80.1 67 65.7
HPP92_025477 Vanilla planifolia HOM05D006191 ORTHO05D007660 1.2e-13 80.1 67 65.7
GSVIVG01037255001 Vitis vinifera HOM05D006191 ORTHO05D007660 1.2e-13 80.1 67 65.7
A05p40330 Brassica napus HOM05D006191 ORTHO05D007660 1.5e-13 79.7 73 56.2
CiPaw.14G114100 Carya illinoinensis HOM05D006191 ORTHO05D007660 1.5e-13 79.7 67 64.2
Peaxi162Scf00004g04011 Petunia axillaris HOM05D006191 ORTHO05D007660 1.5e-13 79.7 67 64.2
Potri.001G277100 Populus trichocarpa HOM05D006191 ORTHO05D007660 1.5e-13 79.7 67 64.2
THA.LOC104819131 Tarenaya hassleriana HOM05D006191 ORTHO05D007660 1.5e-13 79.7 67 64.2
C05p59410 Brassica napus HOM05D006191 ORTHO05D007660 2.0e-13 79.3 73 54.8
CANSAT54G1797 Cannabis sativa HOM05D006191 ORTHO05D007660 2.0e-13 79.3 67 64.2
CAN.G484.24 Capsicum annuum HOM05D006191 ORTHO05D007660 2.0e-13 79.3 67 64.2
CARHR082640 Cardamine hirsuta HOM05D006191 ORTHO05D007660 2.0e-13 79.3 67 59.7
Dinv05064 Davidia involucrata HOM05D006191 ORTHO05D007660 2.0e-13 79.3 67 64.2
Sopen12g034350 Solanum pennellii HOM05D006191 ORTHO05D007660 2.0e-13 79.3 67 64.2
MELO3C014567.2 Cucumis melo HOM05D006191 ORTHO05D007660 2.6e-13 79.0 67 64.2
CsaV3_6G039080 Cucumis sativus L. HOM05D006191 ORTHO05D007660 2.6e-13 79.0 67 64.2
Duzib114G0719 Durio zibethinus HOM05D006191 ORTHO05D007660 2.6e-13 79.0 67 64.2
Lsat_1_v5_gn_2_33900 Lactuca sativa HOM05D006191 ORTHO05D007660 2.6e-13 79.0 67 62.7
Cpa.g.sc3.359 Carica papaya HOM05D006191 ORTHO05D007660 3.4e-13 78.6 67 65.7
Gorai.013G005000 Gossypium raimondii HOM05D006191 ORTHO05D007660 3.4e-13 78.6 67 64.2
Sopen11g024870 Solanum pennellii HOM05D006191 ORTHO05D007660 3.4e-13 78.6 67 64.2
PGSC0003DMG400031241 Solanum tuberosum HOM05D006191 ORTHO05D007660 3.4e-13 78.6 67 64.2
Migut.D00650 Erythranthe guttata HOM05D006191 ORTHO05D007660 4.5e-13 78.2 67 62.7
Nitab4.5_0004018g0100 Nicotiana tabacum HOM05D006191 ORTHO05D007660 4.5e-13 78.2 67 61.2
Sed0001199 Sechium edule HOM05D006191 ORTHO05D007660 4.5e-13 78.2 67 62.7
THA.LOC104825593 Tarenaya hassleriana HOM05D006191 ORTHO05D007660 4.5e-13 78.2 67 62.7
Aa31LG5G18460 Aethionema arabicum HOM05D006191 ORTHO05D007660 5.9e-13 77.8 67 61.2
HanXRQChr06g0182571 Helianthus annuus HOM05D006191 ORTHO05D007660 5.9e-13 77.8 67 62.7
CDE04G1776 Ceratophyllum demersum HOM05D003123 ORTHO05D003492 7.6e-13 77.4 46 69.6
Potri.003G197801 Populus trichocarpa HOM05D006191 ORTHO05D007660 7.6e-13 77.4 67 65.7
Potri.T125106 Populus trichocarpa HOM05D006191 ORTHO05D007660 7.6e-13 77.4 67 65.7
BcaC05g29581 Brassica carinata HOM05D006191 ORTHO05D007660 1.0e-12 77.0 73 53.4
BcaC09g47957 Brassica carinata HOM05D006191 ORTHO05D007660 1.0e-12 77.0 73 54.8
BolC1t05519H Brassica oleracea HOM05D006191 ORTHO05D007660 1.0e-12 77.0 73 54.8
Thhalv10022475m.g Eutrema salsugineum HOM05D006191 ORTHO05D007660 1.0e-12 77.0 67 61.2
QL01p017491 Quercus lobata HOM05D006191 ORTHO05D007660 1.3e-12 76.6 67 62.7
CAN.G1850.1 Capsicum annuum HOM05D006191 ORTHO05D007660 1.7e-12 76.3 67 62.7
Thhalv10021870m.g Eutrema salsugineum HOM05D006191 ORTHO05D007660 1.7e-12 76.3 67 61.2
ATR0745G066 Amborella trichopoda HOM05D006191 ORTHO05D007660 2.2e-12 75.9 73 58.9
ClCG02G022950 Citrullus lanatus HOM05D006191 ORTHO05D007660 2.9e-12 75.5 47 66.0
Sc11g0006400 Simmondsia chinensis HOM05D006191 ORTHO05D007660 2.9e-12 75.5 67 61.2
EL10Ac2g02816 Beta vulgaris HOM05D006191 ORTHO05D007660 5.0e-12 74.7 67 65.7
BraA01t04352Z Brassica rapa HOM05D006191 ORTHO05D007660 5.0e-12 74.7 73 53.4
Haze_23211 Corylus avellana HOM05D000001 ORTHO05D000003 5.0e-12 74.7 47 63.8
ECA238G0093 Erigeron canadensis HOM05D006191 ORTHO05D007660 5.0e-12 74.7 67 61.2
Solyc12g099705.1 Solanum lycopersicum HOM05D006191 ORTHO05D007660 5.0e-12 74.7 90 51.1
Zm00001eb432230 Zea mays HOM05D006191 ORTHO05D007660 6.5e-12 74.3 69 63.8
Lalb_Chr04g0264081 Lupinus albus HOM05D006191 ORTHO05D007660 1.1e-11 73.6 61 68.9
Psat5g217760 Pisum sativum HOM05D006191 ORTHO05D007660 1.1e-11 73.6 61 68.9
TPR.G17809 Trifolium pratense HOM05D006191 ORTHO05D007660 1.1e-11 73.6 60 70.0
Solyc11g150142.1 Solanum lycopersicum HOM05D006191 ORTHO05D007660 1.4e-11 73.2 63 61.9
Actinidia23986 Actinidia chinensis HOM05D006191 ORTHO05D007660 1.9e-11 72.8 63 65.1
AUR62037186 Chenopodium quinoa HOM05D006191 ORTHO05D007660 1.9e-11 72.8 47 66.0
AT3G07910 Arabidopsis thaliana HOM05D006191 ORTHO05D007660 2.5e-11 72.4 69 59.4
Medtr3g017440 Medicago truncatula HOM05D006191 ORTHO05D007660 2.5e-11 72.4 62 66.1
Lalb_Chr25g0282111 Lupinus albus HOM05D006191 ORTHO05D007660 4.2e-11 71.6 61 67.2
arahy.Tifrunner.gnm1.ann1.MB5P1Q Arachis hypogaea HOM05D006191 ORTHO05D007660 9.4e-11 70.5 61 67.2
Glyma.04G138500 Glycine max HOM05D006191 ORTHO05D007660 9.4e-11 70.5 61 65.6
Sabra16G0171200 Salix brachista HOM05D006191 ORTHO05D007660 9.4e-11 70.5 70 58.6
Cfa010050 Carpinus fangiana HOM05D000477 ORTHO05D000338 1.2e-10 70.1 70 57.1
Phvul.005G027500 Phaseolus vulgaris HOM05D006191 ORTHO05D007660 1.6e-10 69.7 61 65.6
arahy.Tifrunner.gnm1.ann1.HDQ2FX Arachis hypogaea HOM05D006191 ORTHO05D007660 2.1e-10 69.3 61 65.6
Lj3g0010990 Lotus japonicus HOM05D006191 ORTHO05D007660 3.6e-10 68.6 61 65.6
Zm00001eb068350 Zea mays HOM05D006191 ORTHO05D007660 3.6e-10 68.6 63 63.5
FvH4_3g28030 Fragaria vesca HOM05D006191 ORTHO05D007660 1.0e-09 67.0 67 52.2
FAN16G3748 Fragaria x ananassa HOM05D006191 ORTHO05D007660 1.0e-09 67.0 67 52.2
FAN21G2777 Fragaria x ananassa HOM05D006191 ORTHO05D007660 1.0e-09 67.0 67 52.2
FAN25G1591 Fragaria x ananassa HOM05D006191 ORTHO05D007660 1.0e-09 67.0 67 52.2
RcHm_v2.0_Chr5g0050711 Rosa chinensis HOM05D006191 ORTHO05D007660 1.0e-09 67.0 67 52.2
BcaC09g47961 Brassica carinata HOM05D006191 ORTHO05D007660 1.8e-09 66.2 59 59.3
Cc01_g05600 Coffea canephora HOM05D006191 ORTHO05D007660 5.1e-09 64.7 65 55.4
Gohir.A13G004900 Gossypium hirsutum HOM05D006191 ORTHO05D007660 1.9e-08 62.8 74 54.1
Rhsim01G0194500 Rhododendron simsii HOM05D000189 ORTHO05D000474 6.3e-07 57.8 35 65.7


User provided reference genes

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