Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO15G129 Micromonas commoda HOM05D005662 ORTHO05D007004 2.5e-112 409.1 250 100.0
CBR_g40194 Chara braunii HOM05D005662 ORTHO05D007004 6.1e-26 122.1 259 34.4
SMO351G0592 Selaginella moellendorffii HOM05D005662 ORTHO05D007004 4.4e-24 115.9 185 36.8
Pp3c16_14910 Physcomitrium patens HOM05D005662 ORTHO05D007004 4.1e-22 109.4 237 31.2
Cre12.g538150 Chlamydomonas reinhardtii HOM05D005662 ORTHO05D007004 8.0e-18 95.1 245 30.6
Pp3c5_5760 Physcomitrium patens HOM05D005662 ORTHO05D007004 1.4e-17 94.4 245 32.7
MSTRG.8809 Avicennia marina HOM05D005662 ORTHO05D007004 1.5e-16 90.9 185 33.0
HanXRQChr16g0512531 Helianthus annuus HOM05D005662 ORTHO05D007004 2.0e-16 90.5 181 34.8
EL10Ac3g05805 Beta vulgaris HOM05D005662 ORTHO05D007004 2.6e-16 90.1 187 32.1
Mapoly0005s0155 Marchantia polymorpha HOM05D005662 ORTHO05D007004 2.6e-16 90.1 183 30.6
Potri.012G128500 Populus trichocarpa HOM05D005662 ORTHO05D007004 2.6e-16 90.1 189 32.8
ECA232G3412 Erigeron canadensis HOM05D005662 ORTHO05D007004 3.4e-16 89.7 183 30.6
Oeu039209.1 Olea europaea HOM05D005662 ORTHO05D007004 4.4e-16 89.4 191 32.5
MD01G1184800 Malus domestica HOM05D005662 ORTHO05D007004 7.5e-16 88.6 185 31.4
Nitab4.5_0000072g0480 Nicotiana tabacum HOM05D005662 ORTHO05D007004 7.5e-16 88.6 188 30.9
Potri.015G129900 Populus trichocarpa HOM05D005662 ORTHO05D007004 9.8e-16 88.2 183 32.8
Atru.chr1.651 Acer truncatum HOM05D005662 ORTHO05D007004 1.3e-15 87.8 186 31.7
BcaB07g29785 Brassica carinata HOM05D005662 ORTHO05D007004 1.3e-15 87.8 202 35.1
C02p62090 Brassica napus HOM05D005662 ORTHO05D007004 1.3e-15 87.8 174 35.1
SGA_v2.0_scaffold2G01165 Striga asiatica HOM05D005662 ORTHO05D007004 1.3e-15 87.8 193 32.6
A02p42240 Brassica napus HOM05D005662 ORTHO05D007004 1.7e-15 87.4 174 35.1
COL.COLO4_14166 Corchorus olitorius HOM05D005662 ORTHO05D007004 2.2e-15 87.0 213 28.2
MBI12_g31644_MAGBIO Magnolia biondii HOM05D005662 ORTHO05D007004 2.2e-15 87.0 193 30.1
Prupe.2G281200 Prunus persica HOM05D005662 ORTHO05D007004 2.2e-15 87.0 185 32.4
RcHm_v2.0_Chr1g0374961 Rosa chinensis HOM05D005662 ORTHO05D007004 2.2e-15 87.0 180 32.2
Aqoxy7G00656 Aquilegia oxysepala HOM05D005662 ORTHO05D007004 2.8e-15 86.7 168 31.0
MD07G1257000 Malus domestica HOM05D005662 ORTHO05D007004 2.8e-15 86.7 185 32.4
SGA_v2.0_scaffold486G52387 Striga asiatica HOM05D005662 ORTHO05D007004 2.8e-15 86.7 185 31.9
Thhalv10004861m.g Eutrema salsugineum HOM05D005662 ORTHO05D007004 3.7e-15 86.3 183 31.7
Lsat_1_v5_gn_8_9401 Lactuca sativa HOM05D005662 ORTHO05D007004 3.7e-15 86.3 185 30.3
TAR374G0299 Trochodendron aralioides HOM05D005662 ORTHO05D007004 3.7e-15 86.3 262 28.2
Duzib084G0609 Durio zibethinus HOM05D005662 ORTHO05D007004 4.8e-15 85.9 178 31.5
Medtr4g033850 Medicago truncatula HOM05D005662 ORTHO05D007004 4.8e-15 85.9 174 29.9
Os03g0249300 Oryza sativa ssp. japonica HOM05D005662 ORTHO05D007004 4.8e-15 85.9 184 31.5
Sabra12G0096500 Salix brachista HOM05D005662 ORTHO05D007004 4.8e-15 85.9 189 32.3
Eucgr.K00149 Eucalyptus grandis HOM05D005662 ORTHO05D007004 6.3e-15 85.5 189 30.7
Peaxi162Scf01372g00048 Petunia axillaris HOM05D005662 ORTHO05D007004 6.3e-15 85.5 186 30.6
Actinidia25029 Actinidia chinensis HOM05D005662 ORTHO05D007004 8.3e-15 85.1 212 27.8
DCAR_015743 Daucus carota HOM05D005662 ORTHO05D007004 8.3e-15 85.1 184 32.1
Hma1.2p1_0654F.1_g196460 Hydrangea macrophylla HOM05D005662 ORTHO05D007004 1.1e-14 84.7 183 31.7
Ciclev10005797m.g Citrus clementina HOM05D005662 ORTHO05D007004 1.4e-14 84.3 183 30.1
Cc02_g04010 Coffea canephora HOM05D005662 ORTHO05D007004 1.4e-14 84.3 185 30.8
Nn4g26371 Nelumbo nucifera HOM05D005662 ORTHO05D007004 1.4e-14 84.3 188 31.9
Nitab4.5_0000481g0050 Nicotiana tabacum HOM05D005662 ORTHO05D007004 1.4e-14 84.3 186 30.6
THA.LOC104821401 Tarenaya hassleriana HOM05D005662 ORTHO05D007004 1.4e-14 84.3 170 32.4
Gohir.D07G210500 Gossypium hirsutum HOM05D005662 ORTHO05D007004 1.8e-14 84.0 210 29.5
Gorai.001G237900 Gossypium raimondii HOM05D005662 ORTHO05D007004 1.8e-14 84.0 210 29.5
unitig_37.g12504 Utricularia gibba HOM05D005662 ORTHO05D007004 1.8e-14 84.0 174 31.6
ATR0733G084 Amborella trichopoda HOM05D005662 ORTHO05D007004 2.4e-14 83.6 187 31.0
C03p64570 Brassica napus HOM05D000207 ORTHO05D001482 2.4e-14 83.6 170 35.9
BolC3t18716H Brassica oleracea HOM05D005662 ORTHO05D007004 2.4e-14 83.6 170 35.9
Dinv22971 Davidia involucrata HOM05D005662 ORTHO05D007004 2.4e-14 83.6 183 31.1
Duzib205G1232 Durio zibethinus HOM05D005662 ORTHO05D007004 2.4e-14 83.6 170 31.8
FvH4_7g28050 Fragaria vesca HOM05D005662 ORTHO05D007004 2.4e-14 83.6 186 31.2
PSO782G3258 Papaver somniferum HOM05D005662 ORTHO05D007004 2.4e-14 83.6 187 29.9
Zm00001eb224250 Zea mays HOM05D005662 ORTHO05D007004 2.4e-14 83.6 246 29.3
QL09p018886 Quercus lobata HOM05D005662 ORTHO05D007004 3.1e-14 83.2 183 30.6
TWI39G1176 Tripterygium wilfordii HOM05D005662 ORTHO05D007004 3.1e-14 83.2 176 29.5
Hund04625 Selenicereus undatus HOM05D005662 ORTHO05D007004 5.4e-14 82.4 184 34.8
SEGI_33447 Sequoiadendron giganteum HOM05D005662 ORTHO05D007004 5.4e-14 82.4 151 32.5
AL8G39110 Arabidopsis lyrata HOM05D005662 ORTHO05D007004 7.0e-14 82.0 183 30.6
CARHR276070 Cardamine hirsuta HOM05D005662 ORTHO05D007004 7.0e-14 82.0 184 32.1
Gohir.A07G204500 Gossypium hirsutum HOM05D005662 ORTHO05D007004 7.0e-14 82.0 185 30.8
PSO478G4436 Papaver somniferum HOM05D005662 ORTHO05D007004 7.0e-14 82.0 187 29.9
Thecc.03G160400 Theobroma cacao HOM05D005662 ORTHO05D007004 7.0e-14 82.0 170 30.0
Actinidia13561 Actinidia chinensis HOM05D005662 ORTHO05D007004 9.1e-14 81.6 257 27.2
AagrBONN_evm.TU.Sc2ySwM_368.1564 Anthoceros agrestis HOM05D005662 ORTHO05D007004 9.1e-14 81.6 101 47.5
SalBow4G2223 Salvia bowleyana HOM05D005662 ORTHO05D007004 9.1e-14 81.6 187 31.6
SalBow4G3324 Salvia bowleyana HOM05D005662 ORTHO05D007004 9.1e-14 81.6 187 31.6
AT5G62290 Arabidopsis thaliana HOM05D005662 ORTHO05D007004 1.2e-13 81.3 184 29.9
A06p29040 Brassica napus HOM05D000207 ORTHO05D001482 1.6e-13 80.9 170 35.3
BraA06t25849Z Brassica rapa HOM05D005662 ORTHO05D007004 1.6e-13 80.9 170 35.3
HPP92_004603 Vanilla planifolia HOM05D005662 ORTHO05D007004 1.6e-13 80.9 183 30.6
CSS0015308 Camellia sinensis var. sinensis HOM05D005662 ORTHO05D007004 2.0e-13 80.5 187 29.4
CANSAT56G2670 Cannabis sativa HOM05D005662 ORTHO05D007004 2.0e-13 80.5 184 31.5
HanXRQChr08g0223561 Helianthus annuus HOM05D005662 ORTHO05D007004 2.7e-13 80.1 183 28.4
CDE02G0217 Ceratophyllum demersum HOM05D005662 ORTHO05D007004 3.5e-13 79.7 178 29.8
Sopen03g023350 Solanum pennellii HOM05D005662 ORTHO05D007004 3.5e-13 79.7 186 28.0
Ca_00244_v3 Cicer arietinum L. HOM05D005662 ORTHO05D007004 4.5e-13 79.3 174 28.7
Ca_30761_v3 Cicer arietinum L. HOM05D005662 ORTHO05D007004 4.5e-13 79.3 174 28.7
PRCOL_00002770 Prasinoderma coloniale HOM05D005662 ORTHO05D007004 5.9e-13 79.0 236 29.7
PGSC0003DMG400023012 Solanum tuberosum HOM05D005662 ORTHO05D007004 5.9e-13 79.0 186 28.0
TAR375G0912 Trochodendron aralioides HOM05D005662 ORTHO05D007004 5.9e-13 79.0 185 30.3
Carub.0008s2298 Capsella rubella HOM05D005662 ORTHO05D007004 7.7e-13 78.6 184 29.3
Solyc03g083540.3 Solanum lycopersicum HOM05D005662 ORTHO05D007004 7.7e-13 78.6 184 27.2
Dinv28543 Davidia involucrata HOM05D005662 ORTHO05D007004 1.0e-12 78.2 183 30.1
Migut.F00442 Erythranthe guttata HOM05D005662 ORTHO05D007004 1.0e-12 78.2 185 31.4
Manes.06G137000 Manihot esculenta HOM05D005662 ORTHO05D007004 1.0e-12 78.2 183 31.1
Psat7g191960 Pisum sativum HOM05D005662 ORTHO05D007004 1.0e-12 78.2 243 26.3
Sp2g25490 Schrenkiella parvula HOM05D005662 ORTHO05D007004 1.0e-12 78.2 170 29.4
BraA02t09152Z Brassica rapa HOM05D005662 ORTHO05D007004 1.3e-12 77.8 190 32.1
TPR.G15119 Trifolium pratense HOM05D005662 ORTHO05D007004 1.3e-12 77.8 174 28.2
GSVIVG01018540001 Vitis vinifera HOM05D005662 ORTHO05D007004 2.3e-12 77.0 183 30.1
CiPaw.03G096300 Carya illinoinensis HOM05D005662 ORTHO05D007004 2.9e-12 76.6 238 26.1
Aa31LG11G1300 Aethionema arabicum HOM05D005662 ORTHO05D007004 3.8e-12 76.3 170 33.5
vmacro06774 Vaccinium macrocarpon HOM05D005662 ORTHO05D007004 8.6e-12 75.1 185 27.6
PGR142G0586 Punica granatum HOM05D005662 ORTHO05D007004 4.2e-11 72.8 258 28.7
Glyma.14G044000 Glycine max HOM05D005662 ORTHO05D007004 9.5e-11 71.6 187 25.1
Glyma.09G233200 Glycine max HOM05D005662 ORTHO05D007004 1.2e-10 71.2 175 25.1
Sed0027239 Sechium edule HOM05D005662 ORTHO05D007004 1.2e-10 71.2 186 26.3
Zm00001eb010690 Zea mays HOM05D005662 ORTHO05D007004 1.2e-10 71.2 182 28.6
Lalb_Chr04g0260971 Lupinus albus HOM05D005662 ORTHO05D007004 3.6e-10 69.7 199 26.1
Os10g0170000 Oryza sativa ssp. japonica HOM05D005662 ORTHO05D007004 3.6e-10 69.7 207 27.5
Ah.13g067320 Amaranthus hybridus HOM05D005662 ORTHO05D007004 6.1e-10 68.9 100 38.0
Phvul.011G004300 Phaseolus vulgaris HOM05D005662 ORTHO05D007004 6.1e-10 68.9 170 25.3
arahy.Tifrunner.gnm1.ann1.QSR7PX Arachis hypogaea HOM05D005662 ORTHO05D007004 8.0e-10 68.6 184 28.3
Sabra15G0143400 Salix brachista HOM05D005662 ORTHO05D007004 8.0e-10 68.6 101 39.6
PSO063G7367 Papaver somniferum HOM05D005662 ORTHO05D007004 1.4e-09 67.8 104 39.4
arahy.Tifrunner.gnm1.ann1.93Q1AU Arachis hypogaea HOM05D005662 ORTHO05D007004 2.3e-09 67.0 181 28.7
MELO3C005412.2 Cucumis melo HOM05D005662 ORTHO05D007004 2.3e-09 67.0 183 25.7
Lsat_1_v5_gn_9_52481 Lactuca sativa HOM05D005662 ORTHO05D007004 2.3e-09 67.0 106 39.6
VMungo1127G2067 Vigna mungo HOM05D005662 ORTHO05D007004 4.0e-09 66.2 170 24.7
Lalb_Chr15g0077021 Lupinus albus HOM05D005662 ORTHO05D007004 5.2e-09 65.9 173 26.6
arahy.Tifrunner.gnm1.ann1.TMT042 Arachis hypogaea HOM05D005662 ORTHO05D007004 8.8e-09 65.1 181 27.6
arahy.Tifrunner.gnm1.ann1.LZP622 Arachis hypogaea HOM05D005662 ORTHO05D007004 1.2e-08 64.7 181 28.2
Lj3g0023650 Lotus japonicus HOM05D005662 ORTHO05D007004 1.5e-08 64.3 139 26.6
Sc13g0007790 Simmondsia chinensis HOM05D005662 ORTHO05D007004 7.5e-08 62.0 102 37.3
Cpa.g.sc130.1 Carica papaya HOM05D005662 ORTHO05D007004 2.2e-07 60.5 93 37.6
Cfa008223 Carpinus fangiana HOM05D000922 ORTHO05D007004 8.3e-07 58.5 131 28.2
Rhsim03G0170700 Rhododendron simsii HOM05D005662 ORTHO05D007004 1.1e-06 58.2 235 24.7
Haze_13835 Corylus avellana HOM05D005662 ORTHO05D007004 7.0e-06 55.5 129 27.1


User provided reference genes

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