Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO15G119 Micromonas commoda HOM05D004553 ORTHO05D005426 7.4e-184 647.1 341 100.0
Potri.005G221700 Populus trichocarpa HOM05D004553 ORTHO05D005426 8.8e-52 208.4 322 45.7
Dinv34597 Davidia involucrata HOM05D004553 ORTHO05D005426 1.2e-51 208.0 321 45.5
Potri.002G041400 Populus trichocarpa HOM05D004553 ORTHO05D005426 4.4e-51 206.1 322 44.7
Nitab4.5_0000500g0290 Nicotiana tabacum HOM05D004553 ORTHO05D005426 5.7e-51 205.7 321 46.1
Nitab4.5_0009451g0050 Nicotiana tabacum HOM05D004553 ORTHO05D005426 5.7e-51 205.7 321 45.5
COL.COLO4_05596 Corchorus olitorius HOM05D004553 ORTHO05D005426 9.8e-51 204.9 320 43.4
Ah.02g111810 Amaranthus hybridus HOM05D004553 ORTHO05D005426 1.3e-50 204.5 337 43.6
TAR365G0062 Trochodendron aralioides HOM05D004553 ORTHO05D005426 1.3e-50 204.5 320 44.1
Actinidia21228 Actinidia chinensis HOM05D004553 ORTHO05D005426 2.2e-50 203.8 321 44.9
AUR62024744 Chenopodium quinoa HOM05D004553 ORTHO05D005426 3.7e-50 203.0 337 42.4
Actinidia23392 Actinidia chinensis HOM05D004553 ORTHO05D005426 6.3e-50 202.2 321 44.9
AUR62011903 Chenopodium quinoa HOM05D004553 ORTHO05D005426 6.3e-50 202.2 337 42.4
Sopen08g026340 Solanum pennellii HOM05D004553 ORTHO05D005426 1.4e-49 201.1 321 45.5
HanXRQChr10g0281111 Helianthus annuus HOM05D004553 ORTHO05D005426 1.8e-49 200.7 321 43.3
Peaxi162Scf00324g00032 Petunia axillaris HOM05D004553 ORTHO05D005426 1.8e-49 200.7 321 44.5
Rhsim01G0266400 Rhododendron simsii HOM05D004553 ORTHO05D005426 1.8e-49 200.7 321 44.5
Solyc08g077830.1 Solanum lycopersicum HOM05D004553 ORTHO05D005426 2.4e-49 200.3 321 45.5
Nitab4.5_0001839g0070 Nicotiana tabacum HOM05D004553 ORTHO05D005426 3.1e-49 199.9 321 45.5
CAN.G572.12 Capsicum annuum HOM05D004553 ORTHO05D005426 4.1e-49 199.5 321 44.5
Nn3g19599 Nelumbo nucifera HOM05D004553 ORTHO05D005426 4.1e-49 199.5 331 42.3
Ciclev10021217m.g Citrus clementina HOM05D004553 ORTHO05D005426 5.4e-49 199.1 320 42.5
Hma1.2p1_0273F.1_g109950 Hydrangea macrophylla HOM05D004553 ORTHO05D005426 5.4e-49 199.1 322 43.2
Prupe.8G227700 Prunus persica HOM05D004553 ORTHO05D005426 7.0e-49 198.7 320 42.2
MELO3C012740.2 Cucumis melo HOM05D004553 ORTHO05D005426 9.1e-49 198.4 319 43.3
Sed0015397 Sechium edule HOM05D004553 ORTHO05D005426 2.0e-48 197.2 323 42.7
CsaV3_7G026990 Cucumis sativus L. HOM05D004553 ORTHO05D005426 2.7e-48 196.8 320 42.5
Gohir.D07G217100 Gossypium hirsutum HOM05D004553 ORTHO05D005426 2.7e-48 196.8 322 42.9
MD10G1187900 Malus domestica HOM05D004553 ORTHO05D005426 2.7e-48 196.8 322 43.8
PGSC0003DMG400026216 Solanum tuberosum HOM05D004553 ORTHO05D005426 2.7e-48 196.8 321 43.9
Gorai.001G251500 Gossypium raimondii HOM05D004553 ORTHO05D005426 3.5e-48 196.4 322 42.9
Gohir.A07G211100 Gossypium hirsutum HOM05D004553 ORTHO05D005426 4.5e-48 196.1 322 42.9
Medtr7g096510 Medicago truncatula HOM05D004553 ORTHO05D005426 7.7e-48 195.3 322 43.8
Cre10.g435550 Chlamydomonas reinhardtii HOM05D004553 ORTHO05D005426 1.0e-47 194.9 336 41.4
ClCG09G008080 Citrullus lanatus HOM05D004553 ORTHO05D005426 1.0e-47 194.9 319 42.3
Cfa002394 Carpinus fangiana HOM05D004553 ORTHO05D005426 1.7e-47 194.1 320 42.8
Os12g0626100 Oryza sativa ssp. japonica HOM05D004553 ORTHO05D005426 1.7e-47 194.1 320 41.9
PGR044G0761 Punica granatum HOM05D004553 ORTHO05D005426 2.2e-47 193.7 320 42.5
Sed0016387 Sechium edule HOM05D004553 ORTHO05D005426 2.2e-47 193.7 320 42.2
Haze_24589 Corylus avellana HOM05D004553 ORTHO05D005426 2.9e-47 193.4 320 42.8
Haze_24593 Corylus avellana HOM05D004553 ORTHO05D005426 2.9e-47 193.4 320 42.8
MBI17_g17502_MAGBIO Magnolia biondii HOM05D004553 ORTHO05D005426 2.9e-47 193.4 321 43.6
TPR.G5760 Trifolium pratense HOM05D004553 ORTHO05D005426 2.9e-47 193.4 320 41.9
Migut.D00406 Erythranthe guttata HOM05D004553 ORTHO05D005426 1.1e-46 191.4 322 43.5
MD05G1201100 Malus domestica HOM05D004553 ORTHO05D005426 2.5e-46 190.3 322 42.5
SGA_v2.0_scaffold31G12652 Striga asiatica HOM05D004553 ORTHO05D005426 7.2e-46 188.7 342 40.6
TPR.G18834 Trifolium pratense HOM05D004553 ORTHO05D005426 2.1e-45 187.2 320 40.9
Aqoxy5G00280 Aquilegia oxysepala HOM05D004553 ORTHO05D005426 2.8e-45 186.8 320 41.6
vmacro03822 Vaccinium macrocarpon HOM05D004553 ORTHO05D005426 2.8e-45 186.8 337 42.7
Manes.05G087500 Manihot esculenta HOM05D004553 ORTHO05D005426 3.0e-44 183.3 320 41.6
Cc03_g10870 Coffea canephora HOM05D004553 ORTHO05D005426 1.2e-43 181.4 321 43.6
PSO675G7515 Papaver somniferum HOM05D004553 ORTHO05D005426 1.7e-42 177.6 320 40.6
Sabra02G0033000 Salix brachista HOM05D004553 ORTHO05D005426 1.7e-42 177.6 320 39.1
MSTRG.3646 Avicennia marina HOM05D004553 ORTHO05D005426 2.2e-42 177.2 321 42.1
Atru.chr5.1915 Acer truncatum HOM05D004553 ORTHO05D005426 2.8e-42 176.8 322 41.0
GSVIVG01028297001 Vitis vinifera HOM05D004553 ORTHO05D005426 2.8e-42 176.8 321 40.5
Psat3g059120 Pisum sativum HOM05D004553 ORTHO05D005426 4.9e-42 176.0 320 40.6
CBR_g46193 Chara braunii HOM05D004553 ORTHO05D005426 1.1e-41 174.9 323 39.0
Hund09587 Selenicereus undatus HOM05D004553 ORTHO05D005426 1.1e-41 174.9 320 40.0
Lsat_1_v5_gn_9_9101 Lactuca sativa HOM05D004553 ORTHO05D005426 1.4e-41 174.5 321 40.5
Lj1A269G34 Lonicera japonica HOM05D004553 ORTHO05D005426 1.8e-41 174.1 322 41.6
Duzib138G1605 Durio zibethinus HOM05D004553 ORTHO05D005426 3.1e-41 173.3 322 40.1
EL10Ac5g10427 Beta vulgaris HOM05D004553 ORTHO05D005426 5.4e-41 172.6 337 39.5
VMungo1383G1775 Vigna mungo HOM05D004553 ORTHO05D005426 7.0e-41 172.2 320 39.4
PRCOL_00005471 Prasinoderma coloniale HOM05D004553 ORTHO05D005426 9.2e-41 171.8 333 38.7
Ca_02526_v3 Cicer arietinum L. HOM05D004553 ORTHO05D005426 1.2e-40 171.4 320 39.7
DCAR_012530 Daucus carota HOM05D004553 ORTHO05D005426 2.0e-40 170.6 320 39.1
TWI12G0019 Tripterygium wilfordii HOM05D004553 ORTHO05D005426 2.0e-40 170.6 320 39.4
Glyma.03G161100 Glycine max HOM05D004553 ORTHO05D005426 3.5e-40 169.9 320 40.0
Phvul.001G159000 Phaseolus vulgaris HOM05D004553 ORTHO05D005426 3.5e-40 169.9 320 39.1
TAR636G3311 Trochodendron aralioides HOM05D004553 ORTHO05D005426 3.5e-40 169.9 320 39.4
CANSAT21G2336 Cannabis sativa HOM05D004553 ORTHO05D005426 5.9e-40 169.1 319 40.1
Lalb_Chr20g0107851 Lupinus albus HOM05D004553 ORTHO05D005426 5.9e-40 169.1 320 38.8
ATR0794G102 Amborella trichopoda HOM05D004553 ORTHO05D005426 1.3e-39 167.9 324 39.8
A09p50940 Brassica napus HOM05D004553 ORTHO05D005426 1.3e-39 167.9 320 39.4
BraA09t40540Z Brassica rapa HOM05D004553 ORTHO05D005426 1.3e-39 167.9 320 39.4
CiPaw.03G261300 Carya illinoinensis HOM05D004553 ORTHO05D005426 1.3e-39 167.9 320 38.8
Sp5g04540 Schrenkiella parvula HOM05D004553 ORTHO05D005426 1.7e-39 167.5 320 39.7
Psat0s2295g0120 Pisum sativum HOM05D004553 ORTHO05D005426 2.3e-39 167.2 320 38.8
AT3G58180 Arabidopsis thaliana HOM05D004553 ORTHO05D005426 3.8e-39 166.4 320 38.8
BcaC07g40188 Brassica carinata HOM05D004553 ORTHO05D005426 3.8e-39 166.4 320 39.1
Zm00001eb259150 Zea mays HOM05D004553 ORTHO05D005426 3.8e-39 166.4 319 38.9
Carub.0005s2503 Capsella rubella HOM05D004553 ORTHO05D005426 1.1e-38 164.9 321 39.3
THA.LOC104802841 Tarenaya hassleriana HOM05D004553 ORTHO05D005426 3.3e-38 163.3 320 37.8
BcaC07g40268 Brassica carinata HOM05D004553 ORTHO05D005426 4.3e-38 162.9 320 38.1
Cpa.g.sc50.47 Carica papaya HOM05D004553 ORTHO05D005426 4.3e-38 162.9 320 38.4
HPP92_007745 Vanilla planifolia HOM05D004553 ORTHO05D005426 5.6e-38 162.5 328 37.5
Os12g0163300 Oryza sativa ssp. japonica HOM05D004553 ORTHO05D005426 7.3e-38 162.2 320 37.8
FAN20G1146 Fragaria x ananassa HOM05D004553 ORTHO05D005426 9.5e-38 161.8 320 37.5
FAN27G3448 Fragaria x ananassa HOM05D004553 ORTHO05D005426 1.2e-37 161.4 320 37.2
Aa31LG10G12900 Aethionema arabicum HOM05D004553 ORTHO05D005426 2.1e-37 160.6 325 37.2
DCAR_009311 Daucus carota HOM05D004553 ORTHO05D005426 2.1e-37 160.6 320 39.4
arahy.Tifrunner.gnm1.ann1.9FA7V6 Arachis hypogaea HOM05D004553 ORTHO05D005426 3.6e-37 159.8 320 37.2
BolC6t37683H Brassica oleracea HOM05D004553 ORTHO05D005426 3.6e-37 159.8 320 37.2
FvH4_2g22010 Fragaria vesca HOM05D004553 ORTHO05D005426 3.6e-37 159.8 320 37.2
Oeu025823.1 Olea europaea HOM05D004553 ORTHO05D005426 3.6e-37 159.8 322 39.1
BolC8t50975H Brassica oleracea HOM05D004553 ORTHO05D005426 4.7e-37 159.5 321 38.3
QL09p037745 Quercus lobata HOM05D004553 ORTHO05D005426 4.7e-37 159.5 320 36.9
BcaC08g44904 Brassica carinata HOM05D004553 ORTHO05D005426 6.1e-37 159.1 320 37.2
RcHm_v2.0_Chr6g0288871 Rosa chinensis HOM05D004553 ORTHO05D005426 6.1e-37 159.1 320 37.2
ECA247G2484 Erigeron canadensis HOM05D004553 ORTHO05D005426 8.0e-37 158.7 269 42.8
unitig_8.g3887 Utricularia gibba HOM05D004553 ORTHO05D005426 8.0e-37 158.7 319 37.9
BcaB02g07544 Brassica carinata HOM05D004553 ORTHO05D005426 1.0e-36 158.3 320 38.1
Thecc.01G262600 Theobroma cacao HOM05D004553 ORTHO05D005426 1.0e-36 158.3 270 42.2
Pp3c11_17490 Physcomitrium patens HOM05D004553 ORTHO05D005426 1.8e-36 157.5 321 38.0
Haze_27369 Corylus avellana HOM05D004553 ORTHO05D005426 4.0e-36 156.4 309 37.5
TWI18G0975 Tripterygium wilfordii HOM05D004553 ORTHO05D005426 1.5e-35 154.5 316 37.7
FAN15G2654 Fragaria x ananassa HOM05D004553 ORTHO05D005426 3.4e-35 153.3 327 36.7
FAN24G1077 Fragaria x ananassa HOM05D004553 ORTHO05D005426 4.4e-35 152.9 327 36.4
AL5G39880 Arabidopsis lyrata HOM05D004553 ORTHO05D005426 1.3e-34 151.4 320 37.8
Eucgr.K03287 Eucalyptus grandis HOM05D004553 ORTHO05D005426 4.9e-34 149.4 320 36.6
Thhalv10006107m.g Eutrema salsugineum HOM05D004553 ORTHO05D005426 4.9e-34 149.4 320 37.5
C08p33760 Brassica napus HOM05D004553 ORTHO05D005426 8.3e-34 148.7 321 37.4
C06p25240 Brassica napus HOM05D004553 ORTHO05D005426 1.1e-33 148.3 320 36.2
PSO541G5588 Papaver somniferum HOM05D004553 ORTHO05D005426 1.1e-33 148.3 320 36.9
A07p23970 Brassica napus HOM05D004553 ORTHO05D005426 3.2e-33 146.7 320 36.9
arahy.Tifrunner.gnm1.ann1.59X69N Arachis hypogaea HOM05D004553 ORTHO05D005426 4.1e-33 146.4 320 35.9
BraA07t30048Z Brassica rapa HOM05D004553 ORTHO05D005426 1.2e-32 144.8 320 35.6
Mapoly0065s0014 Marchantia polymorpha HOM05D004553 ORTHO05D005426 1.2e-32 144.8 283 38.5
AagrBONN_evm.TU.Sc2ySwM_117.1472 Anthoceros agrestis HOM05D004553 ORTHO05D005426 1.6e-32 144.4 322 35.7
arahy.Tifrunner.gnm1.ann1.1I5KFR Arachis hypogaea HOM05D004553 ORTHO05D005426 1.6e-32 144.4 320 35.3
AagrBONN_evm.TU.Sc2ySwM_228.3863 Anthoceros agrestis HOM05D004553 ORTHO05D005426 7.8e-32 142.1 322 35.7
arahy.Tifrunner.gnm1.ann1.6P10V3 Arachis hypogaea HOM05D004553 ORTHO05D005426 7.8e-32 142.1 320 34.7
PSO832G2284 Papaver somniferum HOM05D004553 ORTHO05D005426 1.0e-31 141.7 320 36.2
SalBow6G2244 Salvia bowleyana HOM05D004553 ORTHO05D005426 6.6e-31 139.0 321 37.1
vmacro06125 Vaccinium macrocarpon HOM05D004553 ORTHO05D005426 6.8e-28 129.0 324 34.6
Sc05g0000780 Simmondsia chinensis HOM05D004553 ORTHO05D005426 5.8e-27 125.9 240 40.8
SMO304G0012 Selaginella moellendorffii HOM05D004553 ORTHO05D005426 1.2e-24 118.2 321 33.0
vmacro02641 Vaccinium macrocarpon HOM05D004553 ORTHO05D005426 1.6e-24 117.9 322 33.2
Psat0s2087g0120 Pisum sativum HOM05D004553 ORTHO05D005426 3.9e-23 113.2 120 50.0
CDE04G1470 Ceratophyllum demersum HOM05D004553 ORTHO05D005426 3.6e-21 106.7 120 50.0
Psat2g052960 Pisum sativum HOM05D004553 ORTHO05D005426 4.0e-20 103.2 151 43.0
CARHR168560 Cardamine hirsuta HOM05D004553 ORTHO05D005426 1.3e-18 98.2 241 34.4
Psat0s2088g0080 Pisum sativum HOM05D004553 ORTHO05D005426 1.6e-16 91.3 97 51.5
Glyma.19G162800 Glycine max HOM05D001448 ORTHO05D005781 4.6e-16 89.7 279 32.3
AT3G62530 Arabidopsis thaliana HOM05D004553 ORTHO05D005426 7.8e-16 89.0 162 38.3
HPP92_007825 Vanilla planifolia HOM05D004553 ORTHO05D005426 2.6e-11 73.9 239 31.0
SEGI_01794 Sequoiadendron giganteum HOM05D004553 ORTHO05D005426 7.6e-11 72.4 78 53.8
SEGI_33857 Sequoiadendron giganteum HOM05D004553 ORTHO05D005426 4.6e-08 63.2 164 31.7
Nn1g02691 Nelumbo nucifera HOM05D004553 ORTHO05D005426 8.6e-07 58.9 161 31.1
CDE04G0333 Ceratophyllum demersum HOM05D004553 ORTHO05D005426 1.1e-06 58.5 63 52.4
AagrBONN_evm.TU.Sc2ySwM_228.2479 Anthoceros agrestis HOM05D004553 ORTHO05D005426 2.5e-06 57.4 75 46.7


User provided reference genes

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