Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO15G063 Micromonas commoda HOM05D006476 ORTHO05D008178 2.2e-131 472.2 230 100.0
Cre17.g727100 Chlamydomonas reinhardtii HOM05D006476 ORTHO05D008178 3.3e-18 96.3 98 41.8
Psat7g247200 Pisum sativum HOM05D006476 ORTHO05D008178 3.3e-10 69.7 58 43.1
Mapoly0062s0099 Marchantia polymorpha HOM05D006476 ORTHO05D008178 4.3e-10 69.3 75 37.3
Pp3c1_41280 Physcomitrium patens HOM05D006476 ORTHO05D008178 4.3e-10 69.3 70 38.6
ClCG10G022410 Citrullus lanatus HOM05D006476 ORTHO05D008178 7.4e-10 68.6 119 26.1
CDE04G2527 Ceratophyllum demersum HOM05D006476 ORTHO05D008178 9.6e-10 68.2 74 36.5
Medtr4g014600 Medicago truncatula HOM05D006476 ORTHO05D008178 1.3e-09 67.8 58 39.7
VMungo0331G1781 Vigna mungo HOM05D006476 ORTHO05D008178 2.1e-09 67.0 58 43.1
arahy.Tifrunner.gnm1.ann1.36T17X Arachis hypogaea HOM05D006476 ORTHO05D008178 2.8e-09 66.6 68 39.7
Ca_20338_v3 Cicer arietinum L. HOM05D006476 ORTHO05D008178 2.8e-09 66.6 58 39.7
Actinidia29077 Actinidia chinensis HOM05D006476 ORTHO05D008178 3.7e-09 66.2 114 32.5
Phvul.010G065700 Phaseolus vulgaris HOM05D006476 ORTHO05D008178 3.7e-09 66.2 58 43.1
TPR.G5241 Trifolium pratense HOM05D006476 ORTHO05D008178 3.7e-09 66.2 58 43.1
arahy.Tifrunner.gnm1.ann1.39JBYW Arachis hypogaea HOM05D006476 ORTHO05D008178 4.8e-09 65.9 58 43.1
arahy.Tifrunner.gnm1.ann1.86RN6H Arachis hypogaea HOM05D006476 ORTHO05D008178 4.8e-09 65.9 58 43.1
Glyma.01G124200 Glycine max HOM05D006476 ORTHO05D008178 4.8e-09 65.9 58 43.1
Glyma.03G050400 Glycine max HOM05D006476 ORTHO05D008178 4.8e-09 65.9 58 43.1
Lj3A863T42 Lonicera japonica HOM05D006476 ORTHO05D008178 4.8e-09 65.9 58 44.8
Potri.016G123900 Populus trichocarpa HOM05D006476 ORTHO05D008178 4.8e-09 65.9 58 43.1
Sabra16G0118700 Salix brachista HOM05D006476 ORTHO05D008178 4.8e-09 65.9 58 43.1
SMO364G0439 Selaginella moellendorffii HOM05D006476 ORTHO05D008178 8.1e-09 65.1 62 38.7
Aqoxy1G01315 Aquilegia oxysepala HOM05D006476 ORTHO05D008178 1.1e-08 64.7 58 39.7
Cc06_g00920 Coffea canephora HOM05D006476 ORTHO05D008178 1.1e-08 64.7 68 36.8
Migut.L02041 Erythranthe guttata HOM05D006476 ORTHO05D008178 1.1e-08 64.7 119 31.1
Hund10946 Selenicereus undatus HOM05D006476 ORTHO05D008178 1.1e-08 64.7 66 39.4
CSS0013060 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 1.4e-08 64.3 58 41.4
CSS0023949 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 1.4e-08 64.3 58 41.4
AagrBONN_evm.TU.Sc2ySwM_344.2114 Anthoceros agrestis HOM05D006476 ORTHO05D008178 1.8e-08 63.9 65 36.9
Cfa017133 Carpinus fangiana HOM05D006476 ORTHO05D008178 1.8e-08 63.9 66 36.4
Ciclev10011480m.g Citrus clementina HOM05D006476 ORTHO05D008178 1.8e-08 63.9 58 39.7
COL.COLO4_14474 Corchorus olitorius HOM05D006476 ORTHO05D008178 1.8e-08 63.9 68 35.3
Prupe.6G283400 Prunus persica HOM05D006476 ORTHO05D008178 1.8e-08 63.9 58 39.7
Sed0000477 Sechium edule HOM05D006476 ORTHO05D008178 1.8e-08 63.9 58 37.9
TAR633G1736 Trochodendron aralioides HOM05D006476 ORTHO05D008178 1.8e-08 63.9 58 39.7
CiPaw.10G160000 Carya illinoinensis HOM05D006476 ORTHO05D008178 2.4e-08 63.5 58 39.7
MELO3C009137.2 Cucumis melo HOM05D006476 ORTHO05D008178 2.4e-08 63.5 58 37.9
CsaV3_3G033460 Cucumis sativus L. HOM05D006476 ORTHO05D008178 2.4e-08 63.5 58 39.7
Gohir.A01G229200 Gossypium hirsutum HOM05D006476 ORTHO05D008178 2.4e-08 63.5 58 39.7
Gohir.D01G219100 Gossypium hirsutum HOM05D006476 ORTHO05D008178 2.4e-08 63.5 58 39.7
Gorai.002G265900 Gossypium raimondii HOM05D006476 ORTHO05D008178 2.4e-08 63.5 58 39.7
Haze_21064 Corylus avellana HOM05D006476 ORTHO05D008178 3.1e-08 63.2 58 39.7
Duzib093G1646 Durio zibethinus HOM05D006476 ORTHO05D008178 3.1e-08 63.2 68 35.3
MSTRG.10202 Avicennia marina HOM05D006476 ORTHO05D008178 4.0e-08 62.8 57 42.1
Cpa.g.sc162.36 Carica papaya HOM05D006476 ORTHO05D008178 4.0e-08 62.8 58 37.9
HanXRQChr10g0287121 Helianthus annuus HOM05D006476 ORTHO05D008178 4.0e-08 62.8 58 44.8
Atru.chr8.2316 Acer truncatum HOM05D006476 ORTHO05D008178 5.3e-08 62.4 58 37.9
Nn2g10977 Nelumbo nucifera HOM05D006476 ORTHO05D008178 5.3e-08 62.4 58 37.9
GSVIVG01030297001 Vitis vinifera HOM05D006476 ORTHO05D008178 5.3e-08 62.4 58 37.9
AUR62030513 Chenopodium quinoa HOM05D006476 ORTHO05D008178 6.9e-08 62.0 68 36.8
Lalb_Chr12g0207111 Lupinus albus HOM05D006476 ORTHO05D008178 6.9e-08 62.0 58 39.7
QL07p034180 Quercus lobata HOM05D006476 ORTHO05D008178 6.9e-08 62.0 58 37.9
Sc07g0006480 Simmondsia chinensis HOM05D006476 ORTHO05D008178 6.9e-08 62.0 118 29.7
Lj3g0015173 Lotus japonicus HOM05D006476 ORTHO05D008178 9.0e-08 61.6 68 38.2
Nitab4.5_0000230g0070 Nicotiana tabacum HOM05D006476 ORTHO05D008178 9.0e-08 61.6 58 39.7
Gohir.A04G095014 Gossypium hirsutum HOM05D006476 ORTHO05D008178 1.2e-07 61.2 58 37.9
Gohir.D04G134700 Gossypium hirsutum HOM05D006476 ORTHO05D008178 1.2e-07 61.2 58 37.9
Gorai.012G118300 Gossypium raimondii HOM05D006476 ORTHO05D008178 1.2e-07 61.2 58 37.9
Manes.09G110300 Manihot esculenta HOM05D006476 ORTHO05D008178 1.2e-07 61.2 58 43.1
Thecc.05G008700 Theobroma cacao HOM05D006476 ORTHO05D008178 1.2e-07 61.2 58 37.9
AT5G01590 Arabidopsis thaliana HOM05D006476 ORTHO05D008178 1.5e-07 60.8 58 37.9
CARHR211940 Cardamine hirsuta HOM05D006476 ORTHO05D008178 1.5e-07 60.8 58 37.9
DCAR_018674 Daucus carota HOM05D006476 ORTHO05D008178 1.5e-07 60.8 58 39.7
PSO349G0327 Papaver somniferum HOM05D006476 ORTHO05D008178 1.5e-07 60.8 58 36.2
PSO765G0213 Papaver somniferum HOM05D006476 ORTHO05D008178 1.5e-07 60.8 58 36.2
CANSAT35G1014 Cannabis sativa HOM05D006476 ORTHO05D008178 2.0e-07 60.5 68 35.3
Carub.0006s0024 Capsella rubella HOM05D006476 ORTHO05D008178 2.0e-07 60.5 58 37.9
CAN.G1194.2 Capsicum annuum HOM05D006476 ORTHO05D008178 2.0e-07 60.5 58 37.9
Nitab4.5_0004676g0040 Nicotiana tabacum HOM05D006476 ORTHO05D008178 2.0e-07 60.5 58 37.9
Peaxi162Scf01132g00347 Petunia axillaris HOM05D006476 ORTHO05D008178 2.0e-07 60.5 58 37.9
RcHm_v2.0_Chr3g0461841 Rosa chinensis HOM05D006476 ORTHO05D008178 2.0e-07 60.5 57 38.6
Sp6g40850 Schrenkiella parvula HOM05D006476 ORTHO05D008178 2.0e-07 60.5 58 37.9
PGSC0003DMG400029192 Solanum tuberosum HOM05D006476 ORTHO05D008178 2.0e-07 60.5 58 37.9
Aa31LG1G23210 Aethionema arabicum HOM05D006476 ORTHO05D008178 2.6e-07 60.1 68 32.4
AL6G10460 Arabidopsis lyrata HOM05D006476 ORTHO05D008178 2.6e-07 60.1 58 36.2
BcaB01g06105 Brassica carinata HOM05D006476 ORTHO05D008178 2.6e-07 60.1 58 36.2
BcaB01g06237 Brassica carinata HOM05D006476 ORTHO05D008178 2.6e-07 60.1 58 36.2
A03p00230 Brassica napus HOM05D006476 ORTHO05D008178 2.6e-07 60.1 58 36.2
C03p00370 Brassica napus HOM05D006476 ORTHO05D008178 2.6e-07 60.1 58 36.2
BolC3t12605H Brassica oleracea HOM05D006476 ORTHO05D008178 2.6e-07 60.1 58 36.2
BraA03t09413Z Brassica rapa HOM05D006476 ORTHO05D008178 2.6e-07 60.1 58 36.2
Eucgr.A00607 Eucalyptus grandis HOM05D006476 ORTHO05D008178 2.6e-07 60.1 58 41.4
Thhalv10013251m.g Eutrema salsugineum HOM05D006476 ORTHO05D008178 2.6e-07 60.1 58 36.2
Oeu038728.1 Olea europaea HOM05D006476 ORTHO05D008178 3.4e-07 59.7 58 41.4
HPP92_001920 Vanilla planifolia HOM05D006476 ORTHO05D008178 3.4e-07 59.7 52 38.5
CAN.G168.26 Capsicum annuum HOM05D006476 ORTHO05D008178 4.5e-07 59.3 58 36.2
Dinv10268 Davidia involucrata HOM05D006476 ORTHO05D008178 4.5e-07 59.3 57 38.6
Dinv12144 Davidia involucrata HOM05D006476 ORTHO05D008178 4.5e-07 59.3 57 38.6
Hma1.2p1_0479F.1_g161560 Hydrangea macrophylla HOM05D006476 ORTHO05D008178 4.5e-07 59.3 57 38.6
SEGI_26269 Sequoiadendron giganteum HOM05D006476 ORTHO05D008178 4.5e-07 59.3 57 40.4
Solyc09g013100.3 Solanum lycopersicum HOM05D006476 ORTHO05D008178 4.5e-07 59.3 58 36.2
Sopen09g006940 Solanum pennellii HOM05D006476 ORTHO05D008178 4.5e-07 59.3 58 36.2
ECA247G0212 Erigeron canadensis HOM05D006476 ORTHO05D008178 5.8e-07 58.9 58 41.4
unitig_26.g9345 Utricularia gibba HOM05D006476 ORTHO05D008178 5.8e-07 58.9 58 41.4
MD12G1177900 Malus domestica HOM05D006476 ORTHO05D008178 7.6e-07 58.5 58 36.2
Ah.12g058950 Amaranthus hybridus HOM05D006476 ORTHO05D008178 1.0e-06 58.2 52 42.3
EL10Ac5g12509 Beta vulgaris HOM05D006476 ORTHO05D008178 1.0e-06 58.2 62 37.1
Solyc09g015470.4 Solanum lycopersicum HOM05D006476 ORTHO05D008178 1.3e-06 57.8 57 36.8
CBR_g7951 Chara braunii HOM05D006476 ORTHO05D008178 2.2e-06 57.0 94 30.9
ATR0789G002 Amborella trichopoda HOM05D006476 ORTHO05D008178 2.9e-06 56.6 57 36.8
FvH4_6g10790 Fragaria vesca HOM05D006476 ORTHO05D008178 2.9e-06 56.6 57 36.8
FAN05G3786 Fragaria x ananassa HOM05D006476 ORTHO05D008178 2.9e-06 56.6 57 36.8
FAN05G4924 Fragaria x ananassa HOM05D006476 ORTHO05D008178 2.9e-06 56.6 57 36.8
FAN09G2591 Fragaria x ananassa HOM05D006476 ORTHO05D008178 2.9e-06 56.6 57 36.8
FAN09G3668 Fragaria x ananassa HOM05D006476 ORTHO05D008178 2.9e-06 56.6 57 36.8
FAN14G4129 Fragaria x ananassa HOM05D006476 ORTHO05D008178 2.9e-06 56.6 57 36.8
PGR031G1226 Punica granatum HOM05D006476 ORTHO05D008178 2.9e-06 56.6 58 36.2
PRCOL_00007100 Prasinoderma coloniale HOM05D006476 ORTHO05D008178 3.8e-06 56.2 107 29.0
SGA_v2.0_scaffold110G31194 Striga asiatica HOM05D006476 ORTHO05D008178 3.8e-06 56.2 48 50.0
THA.LOC104816184 Tarenaya hassleriana HOM05D006476 ORTHO05D008178 3.8e-06 56.2 58 31.0
TWI53G1048 Tripterygium wilfordii HOM05D006476 ORTHO05D008178 3.8e-06 56.2 58 36.2
Lsat_1_v5_gn_9_37301 Lactuca sativa HOM05D006476 ORTHO05D008178 8.4e-06 55.1 58 37.9


User provided reference genes

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