Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO15G002 Micromonas commoda HOM05D006438 ORTHO05D007998 2.6e-288 995.0 617 100.0
Hund27192 Selenicereus undatus HOM05D006438 ORTHO05D007998 2.4e-15 88.2 226 31.9
CDE08G0794 Ceratophyllum demersum HOM05D006438 ORTHO05D007998 1.2e-14 85.9 210 31.4
AUR62023453 Chenopodium quinoa HOM05D006438 ORTHO05D007998 2.7e-14 84.7 226 32.3
SMO365G0083 Selaginella moellendorffii HOM05D006438 ORTHO05D007998 3.5e-14 84.3 387 26.1
SHI13317 Sapria himalayana HOM05D006438 ORTHO05D007998 1.0e-13 82.8 226 31.0
Aqoxy5G04279 Aquilegia oxysepala HOM05D006438 ORTHO05D007998 8.6e-13 79.7 222 27.9
Glyma.19G256300 Glycine max HOM05D006438 ORTHO05D007998 1.5e-12 79.0 224 30.4
TPR.G4682 Trifolium pratense HOM05D006438 ORTHO05D007998 1.5e-12 79.0 230 30.0
Prupe.2G189300 Prunus persica HOM05D006438 ORTHO05D007998 1.9e-12 78.6 204 29.9
QL11p022848 Quercus lobata HOM05D006438 ORTHO05D007998 1.9e-12 78.6 208 28.8
Phvul.006G113600 Phaseolus vulgaris HOM05D006438 ORTHO05D007998 2.5e-12 78.2 174 32.8
SalBow3G2635 Salvia bowleyana HOM05D006438 ORTHO05D007998 3.3e-12 77.8 260 28.8
AT3G61800 Arabidopsis thaliana HOM05D006438 ORTHO05D007998 4.3e-12 77.4 172 32.6
Glyma.03G257800 Glycine max HOM05D006438 ORTHO05D007998 4.3e-12 77.4 224 29.9
MSTRG.17348 Avicennia marina HOM05D006438 ORTHO05D007998 5.6e-12 77.0 173 31.2
Eucgr.A01924 Eucalyptus grandis HOM05D006438 ORTHO05D007998 7.3e-12 76.6 211 28.4
QL06p050047 Quercus lobata HOM05D006438 ORTHO05D007998 7.3e-12 76.6 208 28.4
BraA07t30216Z Brassica rapa HOM05D006438 ORTHO05D007998 9.5e-12 76.3 180 27.8
Peaxi162Scf00786g00012 Petunia axillaris HOM05D006438 ORTHO05D007998 9.5e-12 76.3 207 30.4
AL5G44360 Arabidopsis lyrata HOM05D006438 ORTHO05D007998 1.2e-11 75.9 172 32.0
BolC6t37959H Brassica oleracea HOM05D006438 ORTHO05D007998 1.2e-11 75.9 180 27.8
Nn1g00253 Nelumbo nucifera HOM05D006438 ORTHO05D007998 1.2e-11 75.9 174 29.9
Nn3g18981 Nelumbo nucifera HOM05D006438 ORTHO05D007998 1.6e-11 75.5 241 29.5
GSVIVG01027157001 Vitis vinifera HOM05D006438 ORTHO05D007998 1.6e-11 75.5 177 29.9
A07p25760 Brassica napus HOM05D006438 ORTHO05D007998 2.1e-11 75.1 180 27.8
C06p27980 Brassica napus HOM05D006438 ORTHO05D007998 2.1e-11 75.1 180 27.2
CARHR172130 Cardamine hirsuta HOM05D006438 ORTHO05D007998 2.8e-11 74.7 167 31.7
Ca_09510_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 2.8e-11 74.7 227 29.5
Ca_30059_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 2.8e-11 74.7 227 29.5
Nitab4.5_0013402g0010 Nicotiana tabacum HOM05D006438 ORTHO05D007998 2.8e-11 74.7 206 30.1
Thecc.01G341800 Theobroma cacao HOM05D006438 ORTHO05D007998 2.8e-11 74.7 214 29.4
Gohir.A08G125100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 3.6e-11 74.3 215 29.8
PSO063G1116 Papaver somniferum HOM05D006438 ORTHO05D007998 3.6e-11 74.3 170 30.6
Haze_15664 Corylus avellana HOM05D006438 ORTHO05D007998 4.7e-11 73.9 174 31.0
Atru.chr5.676 Acer truncatum HOM05D006438 ORTHO05D007998 6.1e-11 73.6 230 28.7
Manes.13G078900 Manihot esculenta HOM05D006438 ORTHO05D007998 6.1e-11 73.6 203 28.6
Nitab4.5_0000172g0480 Nicotiana tabacum HOM05D006438 ORTHO05D007998 6.1e-11 73.6 206 30.1
Sc23g0002070 Simmondsia chinensis HOM05D006438 ORTHO05D007998 6.1e-11 73.6 230 29.6
Cfa003796 Carpinus fangiana HOM05D006438 ORTHO05D007998 8.0e-11 73.2 174 30.5
MD07G1150500 Malus domestica HOM05D006438 ORTHO05D007998 8.0e-11 73.2 207 29.0
HPP92_008818 Vanilla planifolia HOM05D006438 ORTHO05D007998 8.0e-11 73.2 220 27.3
EL10Ac1g00261 Beta vulgaris HOM05D006438 ORTHO05D007998 1.0e-10 72.8 231 30.7
CANSAT56G2224 Cannabis sativa HOM05D006438 ORTHO05D007998 1.0e-10 72.8 223 29.1
Carub.0005s2854 Capsella rubella HOM05D006438 ORTHO05D007998 1.0e-10 72.8 237 29.1
Duzib138G1266 Durio zibethinus HOM05D006438 ORTHO05D007998 1.0e-10 72.8 215 28.4
arahy.Tifrunner.gnm1.ann1.QN4XTT Arachis hypogaea HOM05D006438 ORTHO05D007998 1.4e-10 72.4 227 28.6
BcaC08g45168 Brassica carinata HOM05D006438 ORTHO05D007998 1.4e-10 72.4 180 27.8
VMungo0540G1767 Vigna mungo HOM05D006438 ORTHO05D007998 1.4e-10 72.4 214 29.0
ClCG06G001260 Citrullus lanatus HOM05D006438 ORTHO05D007998 1.8e-10 72.0 175 29.1
Ciclev10019221m.g Citrus clementina HOM05D006438 ORTHO05D007998 1.8e-10 72.0 173 31.8
Gohir.D08G146100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 1.8e-10 72.0 215 28.8
PSO170G3726 Papaver somniferum HOM05D006438 ORTHO05D007998 1.8e-10 72.0 170 30.0
Pp3c3_31410 Physcomitrium patens HOM05D006438 ORTHO05D007998 1.8e-10 72.0 174 28.7
PGR031G2090 Punica granatum HOM05D006438 ORTHO05D007998 1.8e-10 72.0 174 30.5
Gorai.004G151600 Gossypium raimondii HOM05D006438 ORTHO05D007998 2.3e-10 71.6 215 28.8
MBI07_g40678_MAGBIO Magnolia biondii HOM05D006438 ORTHO05D007998 2.3e-10 71.6 227 26.9
RcHm_v2.0_Chr1g0359811 Rosa chinensis HOM05D006438 ORTHO05D007998 2.3e-10 71.6 220 29.5
Sed0005284 Sechium edule HOM05D006438 ORTHO05D007998 2.3e-10 71.6 172 32.0
CiPaw.02G041100 Carya illinoinensis HOM05D006438 ORTHO05D007998 3.0e-10 71.2 212 28.8
Migut.B01878 Erythranthe guttata HOM05D006438 ORTHO05D007998 3.0e-10 71.2 239 28.9
Psat3g002440 Pisum sativum HOM05D006438 ORTHO05D007998 3.0e-10 71.2 227 29.5
TWI59G0942 Tripterygium wilfordii HOM05D006438 ORTHO05D007998 3.0e-10 71.2 227 28.6
Ah.05g179490 Amaranthus hybridus HOM05D006438 ORTHO05D007998 4.0e-10 70.9 173 30.1
Manes.13G077643 Manihot esculenta HOM05D006438 ORTHO05D007998 4.0e-10 70.9 235 28.5
Sabra14G0072800 Salix brachista HOM05D006438 ORTHO05D007998 4.0e-10 70.9 231 29.4
MELO3C022408.2 Cucumis melo HOM05D006438 ORTHO05D007998 5.2e-10 70.5 175 28.6
CsaV3_6G007190 Cucumis sativus L. HOM05D006438 ORTHO05D007998 5.2e-10 70.5 175 28.6
arahy.Tifrunner.gnm1.ann1.TZA1ET Arachis hypogaea HOM05D006438 ORTHO05D007998 6.8e-10 70.1 227 28.2
Solyc01g096030.4 Solanum lycopersicum HOM05D006438 ORTHO05D007998 6.8e-10 70.1 206 28.6
Sopen01g039750 Solanum pennellii HOM05D006438 ORTHO05D007998 6.8e-10 70.1 206 28.6
PGSC0003DMG400000230 Solanum tuberosum HOM05D006438 ORTHO05D007998 6.8e-10 70.1 206 28.6
MD01G1082100 Malus domestica HOM05D006438 ORTHO05D007998 8.9e-10 69.7 208 28.4
Sp5g01570 Schrenkiella parvula HOM05D006438 ORTHO05D007998 8.9e-10 69.7 211 27.5
DCAR_005393 Daucus carota HOM05D006438 ORTHO05D007998 1.5e-09 68.9 226 28.3
Dinv32596 Davidia involucrata HOM05D006438 ORTHO05D007998 1.5e-09 68.9 229 29.3
Actinidia20246 Actinidia chinensis HOM05D006438 ORTHO05D007998 2.0e-09 68.6 225 28.4
Aa31LG10G15790 Aethionema arabicum HOM05D006438 ORTHO05D007998 2.0e-09 68.6 208 27.4
ECA236G2598 Erigeron canadensis HOM05D006438 ORTHO05D007998 2.0e-09 68.6 214 27.6
Lalb_Chr18g0044491 Lupinus albus HOM05D006438 ORTHO05D007998 2.0e-09 68.6 226 28.3
Potri.002G171600 Populus trichocarpa HOM05D006438 ORTHO05D007998 2.0e-09 68.6 231 27.3
AUR62004500 Chenopodium quinoa HOM05D006438 ORTHO05D007998 2.6e-09 68.2 188 30.3
CAN.G1415.26 Capsicum annuum HOM05D006438 ORTHO05D007998 3.4e-09 67.8 203 29.1
Lj1g0004073 Lotus japonicus HOM05D006438 ORTHO05D007998 3.4e-09 67.8 221 28.1
Medtr7g117420 Medicago truncatula HOM05D006438 ORTHO05D007998 4.4e-09 67.4 175 28.6
Lj7A500T115 Lonicera japonica HOM05D006438 ORTHO05D007998 5.7e-09 67.0 229 29.7
Cpa.g.sc96.25 Carica papaya HOM05D006438 ORTHO05D007998 7.5e-09 66.6 245 27.8
CSS0029538 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 9.8e-09 66.2 222 28.4
FAN01G1234 Fragaria x ananassa HOM05D006438 ORTHO05D007998 9.8e-09 66.2 222 28.4
Rhsim07G0003900 Rhododendron simsii HOM05D006438 ORTHO05D007998 1.3e-08 65.9 224 26.3
FAN10G0107 Fragaria x ananassa HOM05D006438 ORTHO05D007998 2.9e-08 64.7 242 27.7
FAN10G3447 Fragaria x ananassa HOM05D006438 ORTHO05D007998 2.9e-08 64.7 242 27.7
Cc10_g13840 Coffea canephora HOM05D006438 ORTHO05D007998 4.9e-08 63.9 247 27.9
FvH4_7g16650 Fragaria vesca HOM05D006438 ORTHO05D007998 1.8e-07 62.0 242 26.9
unitig_37.g12626 Utricularia gibba HOM05D006438 ORTHO05D007998 3.2e-07 61.2 441 22.9
Mapoly0002s0048 Marchantia polymorpha HOM05D006438 ORTHO05D007998 4.1e-07 60.8 403 24.8
SEGI_11798 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 5.4e-07 60.5 142 28.9
SGA_v2.0_scaffold5G03022 Striga asiatica HOM05D006438 ORTHO05D007998 5.9e-06 57.0 414 24.4
vmacro13165 Vaccinium macrocarpon HOM05D006438 ORTHO05D007998 5.9e-06 57.0 316 24.1


User provided reference genes

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