Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO14G555 Micromonas commoda HOM05D006003 ORTHO05D007388 9.1e-181 636.7 310 100.0
Medtr2g073350 Medicago truncatula HOM05D006003 ORTHO05D007388 4.6e-47 192.6 280 41.1
Migut.M00692 Erythranthe guttata HOM05D006003 ORTHO05D007388 1.3e-46 191.0 282 42.2
MELO3C016117.2 Cucumis melo HOM05D006003 ORTHO05D007388 3.9e-46 189.5 282 40.8
CBR_g12698 Chara braunii HOM05D006003 ORTHO05D007388 1.5e-45 187.6 287 39.7
CsaV3_4G008190 Cucumis sativus L. HOM05D006003 ORTHO05D007388 1.5e-45 187.6 282 40.8
PGR031G3165 Punica granatum HOM05D006003 ORTHO05D007388 1.5e-45 187.6 283 42.8
ClCG07G010140 Citrullus lanatus HOM05D006003 ORTHO05D007388 1.9e-45 187.2 282 40.8
TPR.G12996 Trifolium pratense HOM05D006003 ORTHO05D007388 3.3e-45 186.4 278 40.6
Ca_03928_v3 Cicer arietinum L. HOM05D006003 ORTHO05D007388 5.6e-45 185.7 278 40.3
Ca_30126_v3 Cicer arietinum L. HOM05D006003 ORTHO05D007388 5.6e-45 185.7 278 40.3
Psat5g233200 Pisum sativum HOM05D006003 ORTHO05D007388 9.5e-45 184.9 279 40.9
AUR62019651 Chenopodium quinoa HOM05D006003 ORTHO05D007388 8.0e-44 181.8 283 40.3
PSO541G5634 Papaver somniferum HOM05D006003 ORTHO05D007388 8.0e-44 181.8 282 40.1
Glyma.13G264900 Glycine max HOM05D006003 ORTHO05D007388 1.1e-43 181.4 278 40.3
Pp3c14_23600 Physcomitrium patens HOM05D006003 ORTHO05D007388 1.4e-43 181.0 284 39.8
Lalb_Chr20g0109151 Lupinus albus HOM05D006003 ORTHO05D007388 1.8e-43 180.6 281 39.5
SGA_v2.0_scaffold181G39767 Striga asiatica HOM05D006003 ORTHO05D007388 1.8e-43 180.6 281 39.5
Cc05_g10700 Coffea canephora HOM05D006003 ORTHO05D007388 3.1e-43 179.9 288 39.6
Prupe.4G156400 Prunus persica HOM05D006003 ORTHO05D007388 3.1e-43 179.9 281 40.2
HPP92_006378 Vanilla planifolia HOM05D006003 ORTHO05D007388 3.1e-43 179.9 276 41.7
MSTRG.6692 Avicennia marina HOM05D006003 ORTHO05D007388 4.0e-43 179.5 280 41.4
PSO675G5422 Papaver somniferum HOM05D006003 ORTHO05D007388 4.0e-43 179.5 282 40.1
arahy.Tifrunner.gnm1.ann1.U60PIC Arachis hypogaea HOM05D006003 ORTHO05D007388 1.2e-42 177.9 277 39.0
MD11G1270100 Malus domestica HOM05D006003 ORTHO05D007388 1.5e-42 177.6 288 40.6
unitig_62.g23076 Utricularia gibba HOM05D006003 ORTHO05D007388 1.5e-42 177.6 287 39.0
Lj3g0000598 Lotus japonicus HOM05D006003 ORTHO05D007388 2.0e-42 177.2 279 39.8
SMO169G0094 Selaginella moellendorffii HOM05D006003 ORTHO05D007388 2.0e-42 177.2 286 39.5
Glyma.12G234000 Glycine max HOM05D006003 ORTHO05D007388 2.6e-42 176.8 278 39.2
Lj3g0003080 Lotus japonicus HOM05D006003 ORTHO05D007388 2.6e-42 176.8 279 39.4
Mapoly0214s0005 Marchantia polymorpha HOM05D006003 ORTHO05D007388 3.4e-42 176.4 291 39.2
Os09g0345700 Oryza sativa ssp. japonica HOM05D006003 ORTHO05D007388 3.4e-42 176.4 280 38.9
CANSAT56G1876 Cannabis sativa HOM05D006003 ORTHO05D007388 4.4e-42 176.0 280 38.9
Prupe.4G156300 Prunus persica HOM05D006003 ORTHO05D007388 9.8e-42 174.9 284 40.1
TAR624G1186 Trochodendron aralioides HOM05D006003 ORTHO05D007388 9.8e-42 174.9 281 39.1
TWI39G0770 Tripterygium wilfordii HOM05D006003 ORTHO05D007388 1.7e-41 174.1 282 40.4
CSS0022288 Camellia sinensis var. sinensis HOM05D006003 ORTHO05D007388 2.9e-41 173.3 279 40.9
MD11G1270000 Malus domestica HOM05D006003 ORTHO05D007388 2.9e-41 173.3 282 40.4
Sabra11G0081200 Salix brachista HOM05D006003 ORTHO05D007388 2.9e-41 173.3 281 40.2
FvH4_3g17730 Fragaria vesca HOM05D006003 ORTHO05D007388 3.7e-41 172.9 282 39.4
CSS0003385 Camellia sinensis var. sinensis HOM05D006003 ORTHO05D007388 4.9e-41 172.6 279 40.5
Sed0005123 Sechium edule HOM05D006003 ORTHO05D007388 8.3e-41 171.8 282 39.4
Oeu005377.2 Olea europaea HOM05D006003 ORTHO05D007388 1.1e-40 171.4 279 38.4
GSVIVG01014095001 Vitis vinifera HOM05D006003 ORTHO05D007388 1.1e-40 171.4 282 39.7
Actinidia12605 Actinidia chinensis HOM05D006003 ORTHO05D007388 4.1e-40 169.5 281 39.9
Hma1.2p1_0050F.1_g028770 Hydrangea macrophylla HOM05D006003 ORTHO05D007388 4.1e-40 169.5 282 40.8
Gorai.002G047000 Gossypium raimondii HOM05D006003 ORTHO05D007388 5.4e-40 169.1 276 40.2
Manes.15G098700 Manihot esculenta HOM05D006003 ORTHO05D007388 5.4e-40 169.1 281 37.7
Gohir.A01G047600 Gossypium hirsutum HOM05D006003 ORTHO05D007388 7.0e-40 168.7 276 40.2
Sc16g0007750 Simmondsia chinensis HOM05D006003 ORTHO05D007388 7.0e-40 168.7 283 38.9
Atru.chr2.1967 Acer truncatum HOM05D006003 ORTHO05D007388 9.2e-40 168.3 280 39.3
Eucgr.F01368 Eucalyptus grandis HOM05D006003 ORTHO05D007388 9.2e-40 168.3 286 39.2
vmacro11973 Vaccinium macrocarpon HOM05D006003 ORTHO05D007388 9.2e-40 168.3 282 38.7
Atru.chr2.1938 Acer truncatum HOM05D006003 ORTHO05D007388 1.2e-39 167.9 280 39.6
FAN16G0946 Fragaria x ananassa HOM05D006003 ORTHO05D007388 1.2e-39 167.9 282 39.0
Sabra11G0076500 Salix brachista HOM05D006003 ORTHO05D007388 1.2e-39 167.9 280 40.0
Ah.04g164020 Amaranthus hybridus HOM05D006003 ORTHO05D007388 1.6e-39 167.5 281 38.4
ATR0602G094 Amborella trichopoda HOM05D006003 ORTHO05D007388 1.6e-39 167.5 279 40.9
DCAR_019616 Daucus carota HOM05D006003 ORTHO05D007388 1.6e-39 167.5 282 39.0
Dinv13362 Davidia involucrata HOM05D006003 ORTHO05D007388 2.1e-39 167.2 282 39.0
Potri.011G104400 Populus trichocarpa HOM05D006003 ORTHO05D007388 2.1e-39 167.2 281 39.1
ECA240G1635 Erigeron canadensis HOM05D006003 ORTHO05D007388 2.7e-39 166.8 282 38.7
FAN21G1616 Fragaria x ananassa HOM05D006003 ORTHO05D007388 2.7e-39 166.8 265 40.8
Nitab4.5_0000347g0030 Nicotiana tabacum HOM05D006003 ORTHO05D007388 2.7e-39 166.8 278 39.2
Rhsim06G0211900 Rhododendron simsii HOM05D006003 ORTHO05D007388 2.7e-39 166.8 282 39.0
Nitab4.5_0003230g0040 Nicotiana tabacum HOM05D006003 ORTHO05D007388 3.5e-39 166.4 280 38.9
Gohir.D01G038300 Gossypium hirsutum HOM05D006003 ORTHO05D007388 4.6e-39 166.0 261 41.4
HanXRQChr13g0389731 Helianthus annuus HOM05D006003 ORTHO05D007388 6.0e-39 165.6 283 37.5
FAN25G0059 Fragaria x ananassa HOM05D006003 ORTHO05D007388 7.8e-39 165.2 296 38.5
Oeu059254.1 Olea europaea HOM05D006003 ORTHO05D007388 7.8e-39 165.2 279 36.6
Peaxi162Scf00111g01321 Petunia axillaris HOM05D006003 ORTHO05D007388 1.3e-38 164.5 280 38.6
Thecc.07G133000 Theobroma cacao HOM05D006003 ORTHO05D007388 1.3e-38 164.5 279 38.4
TAR626G1650 Trochodendron aralioides HOM05D006003 ORTHO05D007388 1.7e-38 164.1 278 38.8
Lsat_1_v5_gn_9_100380 Lactuca sativa HOM05D006003 ORTHO05D007388 2.3e-38 163.7 273 37.7
Lj1C824T4 Lonicera japonica HOM05D006003 ORTHO05D007388 6.6e-38 162.2 280 38.9
Ciclev10021233m.g Citrus clementina HOM05D006003 ORTHO05D007388 1.1e-37 161.4 282 38.3
Eucgr.F03233 Eucalyptus grandis HOM05D006003 ORTHO05D007388 1.5e-37 161.0 286 37.1
HanXRQChr14g0439341 Helianthus annuus HOM05D006003 ORTHO05D007388 1.5e-37 161.0 282 36.9
CAN.G375.51 Capsicum annuum HOM05D006003 ORTHO05D007388 2.5e-37 160.2 263 39.9
Solyc07g062150.3 Solanum lycopersicum HOM05D006003 ORTHO05D007388 2.5e-37 160.2 278 37.8
EL10Ac4g08418 Beta vulgaris HOM05D006003 ORTHO05D007388 7.3e-37 158.7 288 36.5
Sopen07g030420 Solanum pennellii HOM05D006003 ORTHO05D007388 7.3e-37 158.7 278 37.4
PGR083G1570 Punica granatum HOM05D006003 ORTHO05D007388 9.5e-37 158.3 300 37.0
Aa31LG4G2370 Aethionema arabicum HOM05D006003 ORTHO05D007388 1.6e-36 157.5 279 37.3
Lj8A146G66 Lonicera japonica HOM05D006003 ORTHO05D007388 1.6e-36 157.5 302 37.1
BcaB05g25146 Brassica carinata HOM05D006003 ORTHO05D007388 2.1e-36 157.1 284 36.6
AL2G38990 Arabidopsis lyrata HOM05D006003 ORTHO05D007388 4.7e-36 156.0 281 37.4
BcaC08g47430 Brassica carinata HOM05D006003 ORTHO05D007388 4.7e-36 156.0 284 36.3
SalBow8G3868 Salvia bowleyana HOM05D006003 ORTHO05D007388 4.7e-36 156.0 279 36.2
BcaC03g15825 Brassica carinata HOM05D006003 ORTHO05D007388 6.2e-36 155.6 284 37.0
BolC2t09587H Brassica oleracea HOM05D006003 ORTHO05D007388 6.2e-36 155.6 284 37.0
CARHR072080 Cardamine hirsuta HOM05D006003 ORTHO05D007388 6.2e-36 155.6 291 37.1
C02p35670 Brassica napus HOM05D006003 ORTHO05D007388 8.1e-36 155.2 284 37.0
Sp5g33680 Schrenkiella parvula HOM05D006003 ORTHO05D007388 8.1e-36 155.2 284 36.6
AT1G78590 Arabidopsis thaliana HOM05D006003 ORTHO05D007388 2.3e-35 153.7 281 36.7
Cfa019519 Carpinus fangiana HOM05D006003 ORTHO05D007388 2.3e-35 153.7 282 38.3
Phvul.005G076600 Phaseolus vulgaris HOM05D006003 ORTHO05D007388 2.3e-35 153.7 223 43.0
PGSC0003DMG400007060 Solanum tuberosum HOM05D006003 ORTHO05D007388 3.1e-35 153.3 271 36.5
C06p52490 Brassica napus HOM05D006003 ORTHO05D007388 4.0e-35 152.9 284 36.6
THA.LOC104813991 Tarenaya hassleriana HOM05D006003 ORTHO05D007388 5.2e-35 152.5 283 36.4
A02p22240 Brassica napus HOM05D006003 ORTHO05D007388 6.8e-35 152.1 284 36.6
Carub.0002s2544 Capsella rubella HOM05D006003 ORTHO05D007388 8.9e-35 151.8 281 37.0
BolC6t40268H Brassica oleracea HOM05D006003 ORTHO05D007388 1.2e-34 151.4 284 36.3
BraA02t07230Z Brassica rapa HOM05D006003 ORTHO05D007388 2.6e-34 150.2 287 35.9
Thhalv10018897m.g Eutrema salsugineum HOM05D006003 ORTHO05D007388 3.4e-34 149.8 284 35.6
MBI06_g08515_MAGBIO Magnolia biondii HOM05D006003 ORTHO05D007388 3.4e-34 149.8 278 36.7
BraA07t31893Z Brassica rapa HOM05D006003 ORTHO05D007388 5.8e-34 149.1 287 35.9
A07p43860 Brassica napus HOM05D006003 ORTHO05D007388 7.5e-34 148.7 287 35.9
QL08p024148 Quercus lobata HOM05D006003 ORTHO05D007388 7.5e-34 148.7 282 36.9
Haze_09249 Corylus avellana HOM05D006003 ORTHO05D007388 3.2e-32 143.3 282 36.5
THA.LOC104808088 Tarenaya hassleriana HOM05D006003 ORTHO05D007388 3.2e-32 143.3 284 34.9
Sc03g0010720 Simmondsia chinensis HOM05D006003 ORTHO05D007388 9.2e-32 141.7 281 33.5
SHI27565 Sapria himalayana HOM05D006003 ORTHO05D007388 2.1e-31 140.6 260 37.3
COL.COLO4_17472 Corchorus olitorius HOM05D006003 ORTHO05D007388 6.0e-31 139.0 222 41.0
Cpa.g.sc77.63 Carica papaya HOM05D006003 ORTHO05D007388 1.3e-30 137.9 282 33.7
Zm00001eb098430 Zea mays HOM05D006003 ORTHO05D007388 3.9e-30 136.3 192 42.7
Nn6g34421 Nelumbo nucifera HOM05D006003 ORTHO05D007388 2.5e-29 133.7 214 42.1
CDE10G0670 Ceratophyllum demersum HOM05D000595 ORTHO05D001274 4.3e-29 132.9 236 39.8
CDE04G1397 Ceratophyllum demersum HOM05D006003 ORTHO05D007388 2.8e-28 130.2 219 40.6
MD03G1247500 Malus domestica HOM05D006003 ORTHO05D007388 1.1e-27 128.3 252 37.3
Duzib268G1415 Durio zibethinus HOM05D006003 ORTHO05D007388 8.9e-27 125.2 212 40.1
Dinv26706 Davidia involucrata HOM05D006003 ORTHO05D007388 1.2e-26 124.8 208 40.4
CiPaw.11G156000 Carya illinoinensis HOM05D006003 ORTHO05D007388 9.9e-26 121.7 216 41.2
RcHm_v2.0_Chr5g0029511 Rosa chinensis HOM05D006003 ORTHO05D007388 6.0e-15 85.9 96 50.0
MD03G1248900 Malus domestica HOM05D006003 ORTHO05D007388 1.0e-14 85.1 161 40.4
PRCOL_00004450 Prasinoderma coloniale HOM05D006003 ORTHO05D007388 8.7e-14 82.0 292 30.1
FAN11G1972 Fragaria x ananassa HOM05D006003 ORTHO05D007388 3.4e-10 70.1 133 33.1
SalBow7G3240 Salvia bowleyana HOM05D006003 ORTHO05D007388 4.2e-08 63.2 130 35.4
RcHm_v2.0_Chr5g0029501 Rosa chinensis HOM05D006003 ORTHO05D007388 2.1e-07 60.8 108 36.1
AUR62039577 Chenopodium quinoa HOM05D006003 ORTHO05D007388 2.7e-07 60.5 107 33.6


User provided reference genes

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