Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO14G442 Micromonas commoda HOM05D006848 ORTHO05D008445 6.6e-131 470.7 236 100.0
CANSAT80G2127 Cannabis sativa HOM05D006848 ORTHO05D008445 1.1e-29 134.4 220 36.8
CAN.G170.111 Capsicum annuum HOM05D006848 ORTHO05D008445 1.9e-29 133.7 202 40.1
Cc02_g27800 Coffea canephora HOM05D006848 ORTHO05D008445 1.9e-29 133.7 170 42.4
DCAR_029663 Daucus carota HOM05D006848 ORTHO05D008445 1.9e-29 133.7 181 43.6
Lj7A569T67 Lonicera japonica HOM05D006848 ORTHO05D008445 3.3e-29 132.9 171 42.7
PRCOL_00004469 Prasinoderma coloniale HOM05D006848 ORTHO05D008445 4.3e-29 132.5 183 38.3
SEGI_25651 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 7.3e-29 131.7 202 39.1
Aqoxy3G03705 Aquilegia oxysepala HOM05D006848 ORTHO05D008445 1.2e-28 131.0 195 40.0
HanXRQChr01g0016151 Helianthus annuus HOM05D006848 ORTHO05D008445 1.2e-28 131.0 177 42.9
Medtr3g028150 Medicago truncatula HOM05D006848 ORTHO05D008445 1.2e-28 131.0 170 42.9
Hma1.2p1_0312F.1_g121500 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 1.6e-28 130.6 176 41.5
Lsat_1_v5_gn_1_107841 Lactuca sativa HOM05D006848 ORTHO05D008445 1.6e-28 130.6 177 42.4
Nitab4.5_0002477g0050 Nicotiana tabacum HOM05D006848 ORTHO05D008445 1.6e-28 130.6 170 42.4
Nitab4.5_0000634g0080 Nicotiana tabacum HOM05D006848 ORTHO05D008445 2.1e-28 130.2 170 42.4
QL04p007215 Quercus lobata HOM05D006848 ORTHO05D008445 2.1e-28 130.2 180 41.7
Peaxi162Scf00347g00071 Petunia axillaris HOM05D006848 ORTHO05D008445 2.8e-28 129.8 177 42.4
Solyc01g087040.2 Solanum lycopersicum HOM05D006848 ORTHO05D008445 2.8e-28 129.8 167 43.7
AagrBONN_evm.TU.Sc2ySwM_228.3199 Anthoceros agrestis HOM05D006848 ORTHO05D008445 3.6e-28 129.4 200 38.0
Psat5g204320 Pisum sativum HOM05D006848 ORTHO05D008445 3.6e-28 129.4 170 42.4
Sed0006624 Sechium edule HOM05D006848 ORTHO05D008445 3.6e-28 129.4 203 39.4
EL10Ac2g03652 Beta vulgaris HOM05D006848 ORTHO05D008445 4.7e-28 129.0 197 39.1
Carub.0005s3015 Capsella rubella HOM05D006848 ORTHO05D008445 4.7e-28 129.0 218 38.1
Peaxi162Scf00428g00063 Petunia axillaris HOM05D006848 ORTHO05D008445 4.7e-28 129.0 201 39.3
Pp3c4_11800 Physcomitrium patens HOM05D006848 ORTHO05D008445 4.7e-28 129.0 199 39.7
TAR623G0094 Trochodendron aralioides HOM05D006848 ORTHO05D008445 4.7e-28 129.0 176 40.9
TAR623G0130 Trochodendron aralioides HOM05D006848 ORTHO05D008445 4.7e-28 129.0 176 40.9
FvH4_7g00900 Fragaria vesca HOM05D006848 ORTHO05D008445 6.2e-28 128.6 179 43.0
Sopen01g034120 Solanum pennellii HOM05D006848 ORTHO05D008445 6.2e-28 128.6 167 43.1
PGSC0003DMG400006872 Solanum tuberosum HOM05D006848 ORTHO05D008445 6.2e-28 128.6 215 38.6
ATR0605G006 Amborella trichopoda HOM05D006848 ORTHO05D008445 8.0e-28 128.3 197 36.5
PSO384G0049 Papaver somniferum HOM05D006848 ORTHO05D008445 1.0e-27 127.9 208 38.9
PGR031G3843 Punica granatum HOM05D006848 ORTHO05D008445 1.0e-27 127.9 200 37.0
Rhsim07G0054800 Rhododendron simsii HOM05D006848 ORTHO05D008445 1.4e-27 127.5 170 42.4
Sc10g0000020 Simmondsia chinensis HOM05D006848 ORTHO05D008445 1.8e-27 127.1 170 41.8
Eucgr.H02489 Eucalyptus grandis HOM05D006848 ORTHO05D008445 2.3e-27 126.7 170 40.6
CiPaw.13G004400 Carya illinoinensis HOM05D006848 ORTHO05D008445 4.0e-27 125.9 181 40.9
Potri.009G062500 Populus trichocarpa HOM05D006848 ORTHO05D008445 4.0e-27 125.9 203 39.9
CsaV3_7G031150 Cucumis sativus L. HOM05D006848 ORTHO05D008445 6.8e-27 125.2 213 38.0
Eucgr.G03390 Eucalyptus grandis HOM05D006848 ORTHO05D008445 6.8e-27 125.2 214 36.4
Glyma.15G273300 Glycine max HOM05D006848 ORTHO05D008445 6.8e-27 125.2 222 37.8
MBI01_g27616_MAGBIO Magnolia biondii HOM05D006848 ORTHO05D008445 6.8e-27 125.2 176 40.9
Sabra09G0046200 Salix brachista HOM05D006848 ORTHO05D008445 6.8e-27 125.2 189 39.7
SMO217G0004 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 6.8e-27 125.2 167 39.5
SMO356G0122 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 6.8e-27 125.2 167 39.5
TPR.G12217 Trifolium pratense HOM05D006848 ORTHO05D008445 6.8e-27 125.2 170 40.6
VMungo1080G1360 Vigna mungo HOM05D006848 ORTHO05D008445 6.8e-27 125.2 197 39.6
PSO135G0340 Papaver somniferum HOM05D006848 ORTHO05D008445 8.9e-27 124.8 208 38.5
HPP92_007477 Vanilla planifolia HOM05D006848 ORTHO05D008445 8.9e-27 124.8 167 42.5
Ca_14368_v3 Cicer arietinum L. HOM05D006848 ORTHO05D008445 1.5e-26 124.0 170 40.0
ClCG09G004240 Citrullus lanatus HOM05D006848 ORTHO05D008445 1.5e-26 124.0 214 38.3
Haze_03213 Corylus avellana HOM05D006848 ORTHO05D008445 1.5e-26 124.0 181 39.8
unitig_750.g28451 Utricularia gibba HOM05D006848 ORTHO05D008445 2.0e-26 123.6 170 40.6
Zm00001eb034740 Zea mays HOM05D006848 ORTHO05D008445 2.0e-26 123.6 177 40.7
AUR62009377 Chenopodium quinoa HOM05D006848 ORTHO05D008445 3.4e-26 122.9 177 40.7
Migut.B01319 Erythranthe guttata HOM05D006848 ORTHO05D008445 3.4e-26 122.9 181 39.2
Oeu036185.1 Olea europaea HOM05D006848 ORTHO05D008445 3.4e-26 122.9 181 38.1
SalBow5G3403 Salvia bowleyana HOM05D006848 ORTHO05D008445 3.4e-26 122.9 177 39.5
CARHR291430 Cardamine hirsuta HOM05D006848 ORTHO05D008445 4.4e-26 122.5 203 38.4
MELO3C023542.2 Cucumis melo HOM05D006848 ORTHO05D008445 4.4e-26 122.5 176 40.3
MD07G1008600 Malus domestica HOM05D006848 ORTHO05D008445 4.4e-26 122.5 170 40.6
AL5G46400 Arabidopsis lyrata HOM05D006848 ORTHO05D008445 5.8e-26 122.1 171 42.1
Gohir.A08G053600 Gossypium hirsutum HOM05D006848 ORTHO05D008445 7.5e-26 121.7 178 40.4
COL.COLO4_23924 Corchorus olitorius HOM05D006848 ORTHO05D008445 9.8e-26 121.3 170 40.6
Lalb_Chr01g0015361 Lupinus albus HOM05D006848 ORTHO05D008445 9.8e-26 121.3 177 40.7
Mapoly0075s0034 Marchantia polymorpha HOM05D006848 ORTHO05D008445 9.8e-26 121.3 168 41.7
A03p27190 Brassica napus HOM05D006848 ORTHO05D008445 1.3e-25 120.9 204 37.3
BraA03t11932Z Brassica rapa HOM05D006848 ORTHO05D008445 1.3e-25 120.9 204 37.3
Duzib138G1675 Durio zibethinus HOM05D006848 ORTHO05D008445 1.3e-25 120.9 212 35.8
Glyma.08G154300 Glycine max HOM05D006848 ORTHO05D008445 1.3e-25 120.9 170 41.2
Gohir.D08G063100 Gossypium hirsutum HOM05D006848 ORTHO05D008445 1.3e-25 120.9 186 38.7
Gorai.004G065300 Gossypium raimondii HOM05D006848 ORTHO05D008445 1.3e-25 120.9 186 38.7
BcaC01g04883 Brassica carinata HOM05D006848 ORTHO05D008445 1.7e-25 120.6 172 41.3
BolC3t15604H Brassica oleracea HOM05D006848 ORTHO05D008445 1.7e-25 120.6 172 41.3
Thecc.01G412000 Theobroma cacao HOM05D006848 ORTHO05D008445 1.7e-25 120.6 214 36.4
Ciclev10032624m.g Citrus clementina HOM05D006848 ORTHO05D008445 2.2e-25 120.2 170 39.4
Atru.chr11.2648 Acer truncatum HOM05D006848 ORTHO05D008445 2.9e-25 119.8 172 39.5
CDE05G1882 Ceratophyllum demersum HOM05D006848 ORTHO05D008445 3.7e-25 119.4 221 36.2
FAN10G1997 Fragaria x ananassa HOM05D006848 ORTHO05D008445 3.7e-25 119.4 173 41.6
vmacro13656 Vaccinium macrocarpon HOM05D006848 ORTHO05D008445 3.7e-25 119.4 214 35.5
Cpa.g.sc386.5 Carica papaya HOM05D006848 ORTHO05D008445 4.9e-25 119.0 213 33.8
TWI09G1547 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 4.9e-25 119.0 198 37.4
TWI53G1868 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 4.9e-25 119.0 200 38.5
THA.LOC104819691 Tarenaya hassleriana HOM05D006848 ORTHO05D008445 8.3e-25 118.2 178 38.2
BcaB01g02988 Brassica carinata HOM05D006848 ORTHO05D008445 1.1e-24 117.9 205 38.0
CBR_g23941 Chara braunii HOM05D006848 ORTHO05D008445 2.4e-24 116.7 223 32.3
RcHm_v2.0_Chr3g0473601 Rosa chinensis HOM05D006848 ORTHO05D008445 3.2e-24 116.3 190 37.9
AUR62023058 Chenopodium quinoa HOM05D006848 ORTHO05D008445 4.1e-24 115.9 171 40.4
MD02G1313800 Malus domestica HOM05D006848 ORTHO05D008445 5.4e-24 115.5 182 37.9
Nn113s43373 Nelumbo nucifera HOM05D006848 ORTHO05D008445 7.8e-23 111.7 158 41.1
Nn2g15435 Nelumbo nucifera HOM05D006848 ORTHO05D008445 7.8e-23 111.7 158 41.1
ECA248G3622 Erigeron canadensis HOM05D006848 ORTHO05D008445 1.3e-22 110.9 199 36.7
C03p32680 Brassica napus HOM05D006848 ORTHO05D008445 3.0e-22 109.8 150 42.7
Manes.10G144600 Manihot esculenta HOM05D006848 ORTHO05D008445 3.0e-22 109.8 166 40.4
Phvul.005G020200 Phaseolus vulgaris HOM05D006848 ORTHO05D008445 5.0e-22 109.0 206 35.9
SGA_v2.0_scaffold167G38443 Striga asiatica HOM05D006848 ORTHO05D008445 8.6e-22 108.2 172 36.6
FAN01G1688 Fragaria x ananassa HOM05D006848 ORTHO05D008445 1.1e-21 107.8 179 39.1
Prupe.2G012000 Prunus persica HOM05D006848 ORTHO05D008445 1.1e-21 107.8 170 38.2
arahy.Tifrunner.gnm1.ann1.27LE56 Arachis hypogaea HOM05D006848 ORTHO05D008445 2.1e-20 103.6 208 34.1
Dinv43453 Davidia involucrata HOM05D006848 ORTHO05D008445 2.1e-20 103.6 136 41.2
FAN06G1876 Fragaria x ananassa HOM05D006848 ORTHO05D008445 2.1e-20 103.6 177 39.0
Aa31LG10G17430 Aethionema arabicum HOM05D006848 ORTHO05D008445 4.7e-20 102.4 144 41.0
arahy.Tifrunner.gnm1.ann1.9ZN1DC Arachis hypogaea HOM05D006848 ORTHO05D008445 4.7e-20 102.4 170 36.5
Thhalv10006361m.g Eutrema salsugineum HOM05D006848 ORTHO05D008445 8.1e-20 101.7 208 33.7
Sp1g00010 Schrenkiella parvula HOM05D006848 ORTHO05D008445 1.1e-19 101.3 173 38.7
Sp5g00040 Schrenkiella parvula HOM05D006848 ORTHO05D008445 1.1e-19 101.3 173 38.7
Os08g0504500 Oryza sativa ssp. japonica HOM05D006848 ORTHO05D008445 2.3e-19 100.1 167 36.5
Lj1g0010524 Lotus japonicus HOM05D006848 ORTHO05D008445 4.0e-19 99.4 174 36.8
Cre03.g198850 Chlamydomonas reinhardtii HOM05D006848 ORTHO05D008445 1.9e-16 90.5 199 31.2
AT3G63540 Arabidopsis thaliana HOM05D006848 ORTHO05D008445 2.4e-16 90.1 140 40.7
SEGI_20764 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 7.3e-13 78.6 91 42.9
Actinidia36713 Actinidia chinensis HOM05D006848 ORTHO05D008445 9.5e-13 78.2 131 40.5
Actinidia24670 Actinidia chinensis HOM05D006848 ORTHO05D008445 9.9e-10 68.2 106 43.4
CDE05G3657 Ceratophyllum demersum HOM05D000031 ORTHO05D008445 1.7e-09 67.4 126 36.5
RcHm_v2.0_Chr1g0315791 Rosa chinensis HOM05D006848 ORTHO05D008445 5.4e-08 62.4 106 37.7
Hma1.2p1_0137F.1_g062450 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 2.1e-07 60.5 108 38.9


User provided reference genes

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