Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO14G438 Micromonas commoda HOM05D006501 ORTHO05D008241 3.1e-38 161.4 85 100.0
PRCOL_00002728 Prasinoderma coloniale HOM05D005851 ORTHO05D049091 5.3e-14 80.9 79 49.4
Cc08_g15900 Coffea canephora HOM05D006501 ORTHO05D008241 1.9e-08 62.4 85 44.7
PGR042G3674 Punica granatum HOM05D006501 ORTHO05D008241 2.5e-08 62.0 85 47.1
SEGI_07201 Sequoiadendron giganteum HOM05D006501 ORTHO05D008241 2.5e-08 62.0 85 45.9
Sc01g0010190 Simmondsia chinensis HOM05D006501 ORTHO05D008241 4.3e-08 61.2 85 44.7
Eucgr.E00849 Eucalyptus grandis HOM05D006501 ORTHO05D008241 5.7e-08 60.8 85 45.9
Hma1.2p1_0952F.1_g241030 Hydrangea macrophylla HOM05D006501 ORTHO05D008241 5.7e-08 60.8 85 44.7
Ciclev10022489m.g Citrus clementina HOM05D006501 ORTHO05D008241 7.4e-08 60.5 85 45.9
Actinidia22724 Actinidia chinensis HOM05D006501 ORTHO05D008241 9.7e-08 60.1 85 44.7
Actinidia27329 Actinidia chinensis HOM05D006501 ORTHO05D008241 9.7e-08 60.1 85 44.7
Cfa022928 Carpinus fangiana HOM05D006501 ORTHO05D008241 9.7e-08 60.1 85 44.7
Gohir.A08G100000 Gossypium hirsutum HOM05D006501 ORTHO05D008241 9.7e-08 60.1 85 44.7
Gohir.D08G131800 Gossypium hirsutum HOM05D006501 ORTHO05D008241 9.7e-08 60.1 85 44.7
Gorai.004G134700 Gossypium raimondii HOM05D006501 ORTHO05D008241 9.7e-08 60.1 85 44.7
HanXRQChr09g0256331 Helianthus annuus HOM05D006501 ORTHO05D008241 9.7e-08 60.1 85 44.7
Oeu009949.1 Olea europaea HOM05D006501 ORTHO05D008241 9.7e-08 60.1 85 45.9
Thecc.03G294700 Theobroma cacao HOM05D006501 ORTHO05D008241 9.7e-08 60.1 85 44.7
Prupe.5G116900 Prunus persica HOM05D006501 ORTHO05D008241 1.3e-07 59.7 85 44.7
Sabra03G0099700 Salix brachista HOM05D006501 ORTHO05D003403 1.3e-07 59.7 85 44.7
THA.LOC104809338 Tarenaya hassleriana HOM05D006501 ORTHO05D008241 1.3e-07 59.7 85 44.7
DCAR_005033 Daucus carota HOM05D006501 ORTHO05D008241 1.7e-07 59.3 85 44.7
Dinv37544 Davidia involucrata HOM05D006501 ORTHO05D008241 1.7e-07 59.3 85 43.5
Manes.02G011600 Manihot esculenta HOM05D006501 ORTHO05D008241 1.7e-07 59.3 85 44.7
AL2G10510 Arabidopsis lyrata HOM05D006501 ORTHO05D008241 2.2e-07 58.9 85 43.5
AT1G64355 Arabidopsis thaliana HOM05D006501 ORTHO05D008241 2.2e-07 58.9 85 43.5
Glyma.05G215800 Glycine max HOM05D006501 ORTHO05D008241 2.2e-07 58.9 85 43.5
MD14G1122900 Malus domestica HOM05D006501 ORTHO05D008241 2.2e-07 58.9 85 44.7
Phvul.002G297000 Phaseolus vulgaris HOM05D006501 ORTHO05D008241 2.2e-07 58.9 85 43.5
Rhsim07G0083200 Rhododendron simsii HOM05D006501 ORTHO05D008241 2.2e-07 58.9 85 43.5
Sp2g00400 Schrenkiella parvula HOM05D006501 ORTHO05D008241 2.2e-07 58.9 85 43.5
Sed0001613 Sechium edule HOM05D006501 ORTHO05D008241 2.2e-07 58.9 85 43.5
VMungo0251G3563 Vigna mungo HOM05D006501 ORTHO05D008241 2.2e-07 58.9 85 43.5
Atru.chr4.2141 Acer truncatum HOM05D006501 ORTHO05D008241 2.8e-07 58.5 85 44.7
CAN.G792.46 Capsicum annuum HOM05D006501 ORTHO05D008241 2.8e-07 58.5 85 43.5
PSO135G1023 Papaver somniferum HOM05D006501 ORTHO05D008241 2.8e-07 58.5 85 44.7
PSO384G3305 Papaver somniferum HOM05D006501 ORTHO05D008241 2.8e-07 58.5 85 44.7
Pp3c8_24130 Physcomitrium patens HOM05D006501 ORTHO05D008241 2.8e-07 58.5 85 43.5
unitig_46.g18618 Utricularia gibba HOM05D006501 ORTHO05D008241 2.8e-07 58.5 85 44.7
AagrBONN_evm.TU.Sc2ySwM_362.747 Anthoceros agrestis HOM05D006501 ORTHO05D008241 3.7e-07 58.2 85 42.4
Aqoxy7G00141 Aquilegia oxysepala HOM05D006501 ORTHO05D008241 3.7e-07 58.2 85 43.5
CSS0007891 Camellia sinensis var. sinensis HOM05D006501 ORTHO05D008241 3.7e-07 58.2 85 42.4
Nn3g19061 Nelumbo nucifera HOM05D006501 ORTHO05D008241 3.7e-07 58.2 85 43.5
Nitab4.5_0006656g0030 Nicotiana tabacum HOM05D006501 ORTHO05D008241 3.7e-07 58.2 85 43.5
Potri.003G138500 Populus trichocarpa HOM05D006501 ORTHO05D008241 3.7e-07 58.2 85 43.5
HPP92_004586 Vanilla planifolia HOM05D006501 ORTHO05D000003 3.7e-07 58.2 85 43.5
GSVIVG01019510001 Vitis vinifera HOM05D006501 ORTHO05D003403 3.7e-07 58.2 85 43.5
BolC9t54619H Brassica oleracea HOM05D006501 ORTHO05D008241 4.8e-07 57.8 85 42.4
BraA09t37076Z Brassica rapa HOM05D006501 ORTHO05D008241 4.8e-07 57.8 85 42.4
CDE10G1320 Ceratophyllum demersum HOM05D000199 ORTHO05D001448 4.8e-07 57.8 85 44.7
Ca_17489_v3 Cicer arietinum L. HOM05D006501 ORTHO05D008241 4.8e-07 57.8 85 42.4
Lalb_Chr05g0224191 Lupinus albus HOM05D006501 ORTHO05D008241 4.8e-07 57.8 85 42.4
Medtr8g099345 Medicago truncatula HOM05D006501 ORTHO05D008241 4.8e-07 57.8 85 42.4
Solyc08g008270.4 Solanum lycopersicum HOM05D006501 ORTHO05D008241 4.8e-07 57.8 85 43.5
Sopen08g004120 Solanum pennellii HOM05D006501 ORTHO05D008241 4.8e-07 57.8 85 43.5
TPR.G3451 Trifolium pratense HOM05D006501 ORTHO05D008241 4.8e-07 57.8 85 42.4
ClCG01G001980 Citrullus lanatus HOM05D006501 ORTHO05D008241 6.3e-07 57.4 85 42.4
COL.COLO4_10671 Corchorus olitorius HOM05D006501 ORTHO05D008241 6.3e-07 57.4 85 42.4
MELO3C005743.2 Cucumis melo HOM05D006501 ORTHO05D008241 6.3e-07 57.4 85 42.4
CsaV3_5G002110 Cucumis sativus L. HOM05D006501 ORTHO05D008241 6.3e-07 57.4 85 42.4
Lj4g0012209 Lotus japonicus HOM05D006501 ORTHO05D008241 6.3e-07 57.4 85 42.4
Peaxi162Scf00102g01748 Petunia axillaris HOM05D006501 ORTHO05D008241 6.3e-07 57.4 85 43.5
Hund11400 Selenicereus undatus HOM05D006501 ORTHO05D008241 6.3e-07 57.4 85 42.4
Psat7g027120 Pisum sativum HOM05D006501 ORTHO05D008241 8.2e-07 57.0 85 41.2
PGSC0003DMG400005788 Solanum tuberosum HOM05D006501 ORTHO05D008241 8.2e-07 57.0 85 42.4
TWI60G0228 Tripterygium wilfordii HOM05D006501 ORTHO05D008241 8.2e-07 57.0 85 43.5
MSTRG.25662 Avicennia marina HOM05D006501 ORTHO05D008241 1.1e-06 56.6 85 42.4
CANSAT21G0520 Cannabis sativa HOM05D006501 ORTHO05D008241 1.1e-06 56.6 85 41.2
MD06G1104000 Malus domestica HOM05D006501 ORTHO05D008241 1.1e-06 56.6 82 45.1
RcHm_v2.0_Chr7g0195201 Rosa chinensis HOM05D006501 ORTHO05D008241 1.1e-06 56.6 85 42.4
Mapoly0049s0020 Marchantia polymorpha HOM05D006501 ORTHO05D008241 1.4e-06 56.2 85 42.4
COL.COLO4_10669 Corchorus olitorius HOM05D006501 ORTHO05D008241 1.8e-06 55.8 85 42.4
Migut.A00672 Erythranthe guttata HOM05D006501 ORTHO05D008241 2.4e-06 55.5 82 42.7
Sed0024637 Sechium edule HOM05D006501 ORTHO05D008241 3.1e-06 55.1 85 42.4
Cre08.g376450 Chlamydomonas reinhardtii HOM05D006501 ORTHO05D008241 4.1e-06 54.7 85 37.6
vmacro13905 Vaccinium macrocarpon HOM05D006501 ORTHO05D008241 4.1e-06 54.7 86 41.9
Zm00001eb296420 Zea mays HOM05D006501 ORTHO05D008241 9.1e-06 53.5 85 43.5


User provided reference genes

Program Settings