Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO14G410 Micromonas commoda HOM05D007018 ORTHO05D008887 1.7e-115 419.5 225 100.0
Os02g0117200 Oryza sativa ssp. japonica HOM05D007018 ORTHO05D008887 6.7e-24 115.2 168 39.3
CsaV3_4G037440 Cucumis sativus L. HOM05D007018 ORTHO05D008887 1.1e-23 114.4 159 37.7
Ciclev10002616m.g Citrus clementina HOM05D007018 ORTHO05D008887 2.5e-23 113.2 149 41.6
TPR.G38107 Trifolium pratense HOM05D007018 ORTHO05D008887 3.3e-23 112.8 171 36.8
Lalb_Chr11g0061471 Lupinus albus HOM05D007018 ORTHO05D008887 4.3e-23 112.5 177 36.2
Sed0005335 Sechium edule HOM05D007018 ORTHO05D008887 1.3e-22 110.9 159 37.1
MELO3C017041.2 Cucumis melo HOM05D007018 ORTHO05D008887 1.7e-22 110.5 159 36.5
FAN18G2290 Fragaria x ananassa HOM05D007018 ORTHO05D008887 1.7e-22 110.5 176 35.2
Hma1.2p1_0699F.1_g205550 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 1.7e-22 110.5 152 37.5
Medtr3g115880 Medicago truncatula HOM05D007018 ORTHO05D008887 1.7e-22 110.5 150 38.7
PGR083G2064 Punica granatum HOM05D007018 ORTHO05D008887 1.7e-22 110.5 188 36.2
RcHm_v2.0_Chr7g0215941 Rosa chinensis HOM05D007018 ORTHO05D008887 1.7e-22 110.5 165 36.4
unitig_749.g13890 Utricularia gibba HOM05D007018 ORTHO05D008887 2.2e-22 110.2 186 34.4
arahy.Tifrunner.gnm1.ann1.UKS4G3 Arachis hypogaea HOM05D007018 ORTHO05D008887 2.8e-22 109.8 169 37.3
FvH4_5g25650 Fragaria vesca HOM05D007018 ORTHO05D008887 2.8e-22 109.8 176 35.2
Sabra05G0196700 Salix brachista HOM05D007018 ORTHO05D008887 2.8e-22 109.8 170 37.1
arahy.Tifrunner.gnm1.ann1.R1PR4F Arachis hypogaea HOM05D007018 ORTHO05D008887 4.8e-22 109.0 177 37.3
Psat5g009640 Pisum sativum HOM05D007018 ORTHO05D008887 4.8e-22 109.0 173 36.4
Prupe.5G008700 Prunus persica HOM05D007018 ORTHO05D008887 4.8e-22 109.0 159 37.7
TWI36G0062 Tripterygium wilfordii HOM05D007018 ORTHO05D008887 4.8e-22 109.0 161 36.0
FAN04G0342 Fragaria x ananassa HOM05D007018 ORTHO05D008887 6.3e-22 108.6 153 37.9
Glyma.06G016200 Glycine max HOM05D007018 ORTHO05D008887 6.3e-22 108.6 150 38.0
TAR625G1418 Trochodendron aralioides HOM05D007018 ORTHO05D008887 6.3e-22 108.6 157 36.3
Lj1g0008636 Lotus japonicus HOM05D007018 ORTHO05D008887 8.2e-22 108.2 170 37.6
Potri.005G253600 Populus trichocarpa HOM05D007018 ORTHO05D008887 8.2e-22 108.2 176 36.4
CDE05G1284 Ceratophyllum demersum HOM05D007018 ORTHO05D008887 1.1e-21 107.8 153 39.9
Sabra02G0005900 Salix brachista HOM05D007018 ORTHO05D008887 1.1e-21 107.8 164 36.6
Zm00001eb209390 Zea mays HOM05D007018 ORTHO05D008887 1.1e-21 107.8 164 37.2
Actinidia17062 Actinidia chinensis HOM05D007018 ORTHO05D008887 1.4e-21 107.5 167 36.5
Aqoxy6G01596 Aquilegia oxysepala HOM05D007018 ORTHO05D008887 1.4e-21 107.5 193 36.3
Lj4A809G49 Lonicera japonica HOM05D007018 ORTHO05D008887 1.4e-21 107.5 165 35.2
Sc26g0004680 Simmondsia chinensis HOM05D007018 ORTHO05D008887 1.4e-21 107.5 173 35.8
BolC8t47779H Brassica oleracea HOM05D007018 ORTHO05D008887 1.8e-21 107.1 157 35.0
CiPaw.08G075600 Carya illinoinensis HOM05D007018 ORTHO05D008887 1.8e-21 107.1 166 38.0
FAN13G0505 Fragaria x ananassa HOM05D007018 ORTHO05D008887 1.8e-21 107.1 153 36.6
Gohir.D01G088700 Gossypium hirsutum HOM05D007018 ORTHO05D008887 2.4e-21 106.7 156 38.5
HPP92_012484 Vanilla planifolia HOM05D007018 ORTHO05D008887 2.4e-21 106.7 170 35.9
SGA_v2.0_scaffold366G50030 Striga asiatica HOM05D007018 ORTHO05D008887 3.1e-21 106.3 185 34.6
VMungo1309G2102 Vigna mungo HOM05D007018 ORTHO05D008887 3.1e-21 106.3 149 37.6
CANSAT25G2394 Cannabis sativa HOM05D007018 ORTHO05D008887 4.1e-21 105.9 170 34.7
CSS0014140 Camellia sinensis var. sinensis HOM05D007018 ORTHO05D008887 5.3e-21 105.5 159 35.8
Duzib093G1136 Durio zibethinus HOM05D007018 ORTHO05D008887 5.3e-21 105.5 153 37.9
Migut.C00367 Erythranthe guttata HOM05D007018 ORTHO05D008887 5.3e-21 105.5 166 36.7
Gorai.002G114400 Gossypium raimondii HOM05D007018 ORTHO05D008887 5.3e-21 105.5 156 38.5
GSVIVG01013398001 Vitis vinifera HOM05D007018 ORTHO05D008887 5.3e-21 105.5 167 35.3
Atru.chr13.101 Acer truncatum HOM05D007018 ORTHO05D008887 6.9e-21 105.1 164 37.2
Gohir.A01G103400 Gossypium hirsutum HOM05D007018 ORTHO05D008887 6.9e-21 105.1 156 38.5
QL02p015150 Quercus lobata HOM05D007018 ORTHO05D008887 6.9e-21 105.1 164 37.2
A08p07720 Brassica napus HOM05D007018 ORTHO05D008887 9.1e-21 104.8 157 34.4
BraA08t32785Z Brassica rapa HOM05D007018 ORTHO05D008887 9.1e-21 104.8 157 34.4
CAN.G311.135 Capsicum annuum HOM05D007018 ORTHO05D008887 9.1e-21 104.8 192 35.4
Dinv31968 Davidia involucrata HOM05D007018 ORTHO05D008887 9.1e-21 104.8 171 35.1
BcaC07g37460 Brassica carinata HOM05D007018 ORTHO05D008887 1.2e-20 104.4 157 34.4
C08p09340 Brassica napus HOM05D007018 ORTHO05D008887 1.2e-20 104.4 157 34.4
Sp1g32030 Schrenkiella parvula HOM05D007018 ORTHO05D008887 1.5e-20 104.0 167 32.9
TAR633G0270 Trochodendron aralioides HOM05D007018 ORTHO05D008887 1.5e-20 104.0 157 35.0
BcaB04g17781 Brassica carinata HOM05D007018 ORTHO05D008887 2.0e-20 103.6 157 33.8
FAN08G2873 Fragaria x ananassa HOM05D007018 ORTHO05D008887 2.0e-20 103.6 153 36.6
AT1G42480 Arabidopsis thaliana HOM05D007018 ORTHO05D008887 2.6e-20 103.2 178 31.5
MD06G1006600 Malus domestica HOM05D007018 ORTHO05D008887 2.6e-20 103.2 159 37.7
THA.LOC104806916 Tarenaya hassleriana HOM05D007018 ORTHO05D008887 3.4e-20 102.8 169 33.1
DCAR_022937 Daucus carota HOM05D007018 ORTHO05D008887 4.5e-20 102.4 174 33.3
Eucgr.F01791 Eucalyptus grandis HOM05D007018 ORTHO05D008887 4.5e-20 102.4 177 33.9
Nn5g31007 Nelumbo nucifera HOM05D007018 ORTHO05D008887 5.9e-20 102.1 177 33.3
Carub.0001s3428 Capsella rubella HOM05D007018 ORTHO05D008887 7.7e-20 101.7 173 31.2
Haze_22833 Corylus avellana HOM05D007018 ORTHO05D008887 7.7e-20 101.7 151 37.1
PGSC0003DMG400009913 Solanum tuberosum HOM05D007018 ORTHO05D008887 7.7e-20 101.7 185 34.6
CARHR292440 Cardamine hirsuta HOM05D007018 ORTHO05D008887 1.0e-19 101.3 175 32.0
AL1G51350 Arabidopsis lyrata HOM05D007018 ORTHO05D008887 1.3e-19 100.9 175 31.4
Thhalv10004993m.g Eutrema salsugineum HOM05D007018 ORTHO05D008887 1.3e-19 100.9 175 31.4
PSO541G4149 Papaver somniferum HOM05D007018 ORTHO05D008887 1.3e-19 100.9 198 36.9
Solyc04g082590.3 Solanum lycopersicum HOM05D007018 ORTHO05D008887 1.3e-19 100.9 183 35.0
MSTRG.993 Avicennia marina HOM05D007018 ORTHO05D008887 1.7e-19 100.5 183 35.0
HanXRQChr08g0216381 Helianthus annuus HOM05D007018 ORTHO05D008887 1.7e-19 100.5 172 35.5
ClCG11G018850 Citrullus lanatus HOM05D007018 ORTHO05D008887 2.9e-19 99.8 159 35.2
Manes.18G003600 Manihot esculenta HOM05D007018 ORTHO05D008887 2.9e-19 99.8 153 34.6
ECA233G6114 Erigeron canadensis HOM05D000716 ORTHO05D002658 3.8e-19 99.4 154 33.8
Rhsim06G0005000 Rhododendron simsii HOM05D007018 ORTHO05D008887 3.8e-19 99.4 177 33.3
Cc04_g01910 Coffea canephora HOM05D007018 ORTHO05D008887 5.0e-19 99.0 169 34.3
Phvul.009G006300 Phaseolus vulgaris HOM05D007018 ORTHO05D008887 5.0e-19 99.0 171 32.2
Ca_15400_v3 Cicer arietinum L. HOM05D007018 ORTHO05D008887 6.5e-19 98.6 118 41.5
COL.COLO4_37754 Corchorus olitorius HOM05D007018 ORTHO05D008887 6.5e-19 98.6 132 41.7
Sopen04g036220 Solanum pennellii HOM05D007018 ORTHO05D008887 6.5e-19 98.6 176 34.7
Peaxi162Scf00680g00121 Petunia axillaris HOM05D007018 ORTHO05D008887 8.5e-19 98.2 185 34.6
Aa31sc108G20 Aethionema arabicum HOM05D007018 ORTHO05D008887 3.2e-18 96.3 175 31.4
Lsat_1_v5_gn_8_27360 Lactuca sativa HOM05D007018 ORTHO05D008887 9.4e-18 94.7 190 31.1
ATR0807G118 Amborella trichopoda HOM05D007018 ORTHO05D008887 1.4e-16 90.9 135 35.6
vmacro21785 Vaccinium macrocarpon HOM05D007018 ORTHO05D008887 1.4e-16 90.9 92 48.9
Cre16.g661700 Chlamydomonas reinhardtii HOM05D007018 ORTHO05D008887 1.8e-16 90.5 204 34.3
AUR62035144 Chenopodium quinoa HOM05D007018 ORTHO05D008887 5.1e-16 89.0 87 55.2
Hma1.2p1_0699F.1_g205540 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 5.1e-16 89.0 127 36.2
Pp3c3_21490 Physcomitrium patens HOM05D007018 ORTHO05D008887 6.7e-16 88.6 203 31.5
SalBow7G2934 Salvia bowleyana HOM05D007018 ORTHO05D008887 6.7e-16 88.6 143 34.3
AagrBONN_evm.TU.Sc2ySwM_228.4250 Anthoceros agrestis HOM05D007018 ORTHO05D008887 1.5e-15 87.4 88 47.7
EL10Ac1g01910 Beta vulgaris HOM05D007018 ORTHO05D008887 2.0e-15 87.0 70 60.0
AUR62042577 Chenopodium quinoa HOM05D007018 ORTHO05D008887 1.4e-13 80.9 87 52.9
Nitab4.5_0009646g0030 Nicotiana tabacum HOM05D007018 ORTHO05D008887 2.4e-13 80.1 89 47.2
Manes.13G069000 Manihot esculenta HOM05D007018 ORTHO05D008887 1.7e-11 73.9 119 33.6
Actinidia15510 Actinidia chinensis HOM05D007018 ORTHO05D008887 3.8e-11 72.8 119 32.8
Thecc.08G062700 Theobroma cacao HOM05D007018 ORTHO05D008887 2.5e-10 70.1 119 33.6
PRCOL_00006317 Prasinoderma coloniale HOM05D007018 ORTHO05D008887 7.2e-10 68.6 143 28.7
HPP92_001689 Vanilla planifolia HOM05D007018 ORTHO05D008887 1.8e-08 63.9 166 26.5
SEGI_04341 Sequoiadendron giganteum HOM05D007018 ORTHO05D008887 4.0e-08 62.8 58 53.4
Hund05090 Selenicereus undatus HOM05D007018 ORTHO05D008887 2.6e-07 60.1 44 65.9
AUR62042580 Chenopodium quinoa HOM05D007018 ORTHO05D008887 3.7e-06 56.2 55 56.4


User provided reference genes

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