Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO14G289 Micromonas commoda HOM05D006491 ORTHO05D008412 3.2e-243 844.7 446 100.0
Cre14.g613450 Chlamydomonas reinhardtii HOM05D006491 ORTHO05D008412 1.2e-45 188.3 183 54.6
AagrBONN_evm.TU.Sc2ySwM_344.1093 Anthoceros agrestis HOM05D006491 ORTHO05D008412 1.2e-40 171.8 175 53.7
SMO358G0273 Selaginella moellendorffii HOM05D006491 ORTHO05D008412 4.6e-40 169.9 180 49.4
TWI63G0546 Tripterygium wilfordii HOM05D006491 ORTHO05D008412 1.5e-38 164.9 182 50.0
Migut.K00266 Erythranthe guttata HOM05D006491 ORTHO05D008412 5.6e-38 162.9 204 45.1
Psat4g010880 Pisum sativum HOM05D006491 ORTHO05D008412 2.1e-37 161.0 157 52.2
Rhsim03G0262200 Rhododendron simsii HOM05D006491 ORTHO05D008412 2.1e-37 161.0 187 47.6
CiPaw.07G187800 Carya illinoinensis HOM05D006491 ORTHO05D008412 3.6e-37 160.2 188 47.3
Dinv41291 Davidia involucrata HOM05D006491 ORTHO05D008412 3.6e-37 160.2 257 41.2
unitig_62.g23494 Utricularia gibba HOM05D006491 ORTHO05D008412 3.6e-37 160.2 189 49.2
HanXRQChr05g0136551 Helianthus annuus HOM05D006491 ORTHO05D008412 4.7e-37 159.8 175 50.3
Nn2g14424 Nelumbo nucifera HOM05D006491 ORTHO05D008412 4.7e-37 159.8 188 48.9
MSTRG.10725 Avicennia marina HOM05D006491 ORTHO05D008412 6.1e-37 159.5 176 49.4
Manes.14G150100 Manihot esculenta HOM05D006491 ORTHO05D008412 1.0e-36 158.7 185 47.0
Sabra18G0084000 Salix brachista HOM05D006491 ORTHO05D008412 1.0e-36 158.7 182 48.4
Ah.09g229650 Amaranthus hybridus HOM05D006491 ORTHO05D008412 1.4e-36 158.3 170 49.4
CSS0049223 Camellia sinensis var. sinensis HOM05D006491 ORTHO05D008412 1.4e-36 158.3 187 49.2
MELO3C017512.2 Cucumis melo HOM05D006491 ORTHO05D008412 1.4e-36 158.3 154 51.9
Pp3c9_21480 Physcomitrium patens HOM05D006491 ORTHO05D008412 1.4e-36 158.3 163 54.0
GSVIVG01029103001 Vitis vinifera HOM05D006491 ORTHO05D008412 1.4e-36 158.3 186 48.9
Actinidia25168 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.8e-36 157.9 189 47.6
PGR142G3664 Punica granatum HOM05D006491 ORTHO05D008412 1.8e-36 157.9 249 43.0
Medtr4g129150 Medicago truncatula HOM05D006491 ORTHO05D008412 2.3e-36 157.5 157 51.6
Actinidia17333 Actinidia chinensis HOM05D006491 ORTHO05D008412 3.1e-36 157.1 197 47.7
Aa31LG3G170 Aethionema arabicum HOM05D006491 ORTHO05D008412 3.1e-36 157.1 160 53.1
Ciclev10008637m.g Citrus clementina HOM05D006491 ORTHO05D008412 3.1e-36 157.1 155 52.9
ClCG06G012970 Citrullus lanatus HOM05D006491 ORTHO05D008412 4.0e-36 156.8 232 40.1
Atru.chr7.558 Acer truncatum HOM05D006491 ORTHO05D008412 5.2e-36 156.4 155 53.5
FvH4_4g08360 Fragaria vesca HOM05D006491 ORTHO05D008412 5.2e-36 156.4 154 50.0
MBI14_g24284_MAGBIO Magnolia biondii HOM05D006491 ORTHO05D008412 5.2e-36 156.4 160 51.2
FAN12G3371 Fragaria x ananassa HOM05D006491 ORTHO05D008412 6.8e-36 156.0 184 43.5
FAN22G1104 Fragaria x ananassa HOM05D006491 ORTHO05D008412 6.8e-36 156.0 184 43.5
Gohir.D08G096700 Gossypium hirsutum HOM05D006491 ORTHO05D008412 6.8e-36 156.0 155 54.2
Gorai.004G103700 Gossypium raimondii HOM05D006491 ORTHO05D008412 6.8e-36 156.0 155 54.2
Lj4g0007651 Lotus japonicus HOM05D006491 ORTHO05D008412 6.8e-36 156.0 157 51.0
PSO063G6711 Papaver somniferum HOM05D006491 ORTHO05D008412 6.8e-36 156.0 160 54.4
PSO782G2884 Papaver somniferum HOM05D006491 ORTHO05D008412 6.8e-36 156.0 160 54.4
EL10Ac8g18256 Beta vulgaris HOM05D006491 ORTHO05D008412 8.9e-36 155.6 185 47.0
RcHm_v2.0_Chr4g0404161 Rosa chinensis HOM05D006491 ORTHO05D008412 8.9e-36 155.6 184 43.5
Sp7g25960 Schrenkiella parvula HOM05D006491 ORTHO05D008412 8.9e-36 155.6 185 45.9
Actinidia14076 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.2e-35 155.2 195 47.2
Actinidia17330 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.2e-35 155.2 195 47.2
arahy.Tifrunner.gnm1.ann1.1P8XK5 Arachis hypogaea HOM05D006491 ORTHO05D008412 1.2e-35 155.2 183 48.1
arahy.Tifrunner.gnm1.ann1.E3AGAX Arachis hypogaea HOM05D006491 ORTHO05D008412 1.2e-35 155.2 183 48.1
Ca_21191_v3 Cicer arietinum L. HOM05D006491 ORTHO05D008412 1.2e-35 155.2 157 51.0
Os09g0428900 Oryza sativa ssp. japonica HOM05D006491 ORTHO05D008412 1.2e-35 155.2 154 53.9
Phvul.003G149900 Phaseolus vulgaris HOM05D006491 ORTHO05D008412 1.2e-35 155.2 188 45.2
TAR383G0527 Trochodendron aralioides HOM05D006491 ORTHO05D008412 1.2e-35 155.2 155 51.6
ECA236G3989 Erigeron canadensis HOM05D006491 ORTHO05D008412 1.5e-35 154.8 155 53.5
Cfa013536 Carpinus fangiana HOM05D006491 ORTHO05D008412 2.0e-35 154.5 182 49.5
Glyma.13G093000 Glycine max HOM05D006491 ORTHO05D008412 2.0e-35 154.5 192 45.3
Lsat_1_v5_gn_8_65441 Lactuca sativa HOM05D006491 ORTHO05D008412 2.0e-35 154.5 174 47.7
Lalb_Chr13g0300441 Lupinus albus HOM05D006491 ORTHO05D008412 2.0e-35 154.5 160 49.4
Prupe.1G095000 Prunus persica HOM05D006491 ORTHO05D008412 2.6e-35 154.1 161 49.7
QL02p096111 Quercus lobata HOM05D006491 ORTHO05D008412 2.6e-35 154.1 188 46.8
Duzib150G0568 Durio zibethinus HOM05D006491 ORTHO05D008412 3.4e-35 153.7 155 52.3
Mapoly0045s0079 Marchantia polymorpha HOM05D006491 ORTHO05D008412 3.4e-35 153.7 184 44.0
Thecc.09G163600 Theobroma cacao HOM05D006491 ORTHO05D008412 3.4e-35 153.7 194 46.9
DCAR_017948 Daucus carota HOM05D006491 ORTHO05D008412 5.8e-35 152.9 155 52.3
Thhalv10025588m.g Eutrema salsugineum HOM05D006491 ORTHO05D008412 5.8e-35 152.9 321 32.4
Potri.018G096900 Populus trichocarpa HOM05D006491 ORTHO05D008412 5.8e-35 152.9 182 47.3
ATR0580G190 Amborella trichopoda HOM05D006491 ORTHO05D008412 7.5e-35 152.5 161 50.9
CANSAT11G0137 Cannabis sativa HOM05D006491 ORTHO05D008412 7.5e-35 152.5 155 51.6
CsaV3_1G029540 Cucumis sativus L. HOM05D006491 ORTHO05D008412 7.5e-35 152.5 231 39.8
Sc14g0001140 Simmondsia chinensis HOM05D006491 ORTHO05D008412 7.5e-35 152.5 158 51.3
THA.LOC104817809 Tarenaya hassleriana HOM05D006491 ORTHO05D008412 7.5e-35 152.5 182 46.7
TPR.G5304 Trifolium pratense HOM05D006491 ORTHO05D008412 7.5e-35 152.5 157 51.0
VMungo1215G2097 Vigna mungo HOM05D006491 ORTHO05D008412 7.5e-35 152.5 195 44.1
Eucgr.C00197 Eucalyptus grandis HOM05D006491 ORTHO05D008412 9.8e-35 152.1 160 51.2
MCO01G751 Micromonas commoda HOM05D006491 ORTHO05D008412 2.2e-34 151.0 168 46.4
AL7G24610 Arabidopsis lyrata HOM05D006491 ORTHO05D008412 2.9e-34 150.6 320 31.9
AT4G28020 Arabidopsis thaliana HOM05D006491 ORTHO05D008412 2.9e-34 150.6 185 44.9
MD13G1262500 Malus domestica HOM05D006491 ORTHO05D008412 3.7e-34 150.2 185 46.5
Carub.0007s1278 Capsella rubella HOM05D006491 ORTHO05D008412 4.9e-34 149.8 185 44.3
CAN.G135.50 Capsicum annuum HOM05D006491 ORTHO05D008412 4.9e-34 149.8 194 44.8
COL.COLO4_16079 Corchorus olitorius HOM05D006491 ORTHO05D008412 4.9e-34 149.8 182 47.8
BolC8t48733H Brassica oleracea HOM05D006491 ORTHO05D008412 6.4e-34 149.4 158 50.0
BraA08t33984Z Brassica rapa HOM05D006491 ORTHO05D008412 6.4e-34 149.4 185 45.4
PRCOL_00001913 Prasinoderma coloniale HOM05D006491 ORTHO05D008412 6.4e-34 149.4 189 48.7
A08p20250 Brassica napus HOM05D006491 ORTHO05D008412 8.3e-34 149.1 185 45.4
Sopen11g003610 Solanum pennellii HOM05D006491 ORTHO05D008412 1.1e-33 148.7 197 43.1
Aqoxy7G03183 Aquilegia oxysepala HOM05D006491 ORTHO05D008412 1.4e-33 148.3 160 50.0
BcaB03g12553 Brassica carinata HOM05D006491 ORTHO05D008412 1.4e-33 148.3 158 49.4
Solyc11g007750.3 Solanum lycopersicum HOM05D006491 ORTHO05D008412 1.4e-33 148.3 197 43.7
Sed0015960 Sechium edule HOM05D006491 ORTHO05D008412 1.9e-33 147.9 142 51.4
BcaC07g38308 Brassica carinata HOM05D006491 ORTHO05D008412 2.4e-33 147.5 185 44.9
C08p10580 Brassica napus HOM05D006491 ORTHO05D008412 2.4e-33 147.5 185 44.9
Hma1.2p1_0921F.1_g236670 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 2.4e-33 147.5 178 46.6
Nitab4.5_0000593g0170 Nicotiana tabacum HOM05D006491 ORTHO05D008412 2.4e-33 147.5 197 44.2
Cpa.g.sc450.5 Carica papaya HOM05D006491 ORTHO05D008412 4.1e-33 146.7 202 44.1
Gohir.A08G070300 Gossypium hirsutum HOM05D006491 ORTHO05D008412 4.1e-33 146.7 155 52.3
Nitab4.5_0003408g0120 Nicotiana tabacum HOM05D006491 ORTHO05D008412 4.1e-33 146.7 197 43.7
PGSC0003DMG401027355 Solanum tuberosum HOM05D006491 ORTHO05D008412 4.1e-33 146.7 198 42.9
CARHR235700 Cardamine hirsuta HOM05D006491 ORTHO05D008412 7.0e-33 146.0 185 44.3
Haze_22140 Corylus avellana HOM05D006491 ORTHO05D008412 7.0e-33 146.0 193 46.6
Lj9A730G48 Lonicera japonica HOM05D006491 ORTHO05D008412 9.2e-33 145.6 184 45.7
Zm00001eb313540 Zea mays HOM05D006491 ORTHO05D008412 2.0e-32 144.4 236 41.9
vmacro06036 Vaccinium macrocarpon HOM05D006491 ORTHO05D008412 2.3e-31 141.0 203 40.4
Oeu043515.2 Olea europaea HOM05D006491 ORTHO05D008412 2.5e-30 137.5 182 44.5
Cc06_g13780 Coffea canephora HOM05D006491 ORTHO05D008412 3.3e-30 137.1 194 39.7
Peaxi162Scf00113g00085 Petunia axillaris HOM05D006491 ORTHO05D008412 3.3e-30 137.1 161 47.2
Glyma.17G067500 Glycine max HOM05D006491 ORTHO05D008412 8.1e-29 132.5 157 46.5
SGA_v2.0_scaffold242G44263 Striga asiatica HOM05D006491 ORTHO05D008412 2.5e-22 110.9 151 43.7
MELO3C026731.2 Cucumis melo HOM05D006491 ORTHO05D008412 5.6e-22 109.8 143 42.7
AUR62039980 Chenopodium quinoa HOM05D006491 ORTHO05D008412 7.3e-22 109.4 157 39.5
AUR62040289 Chenopodium quinoa HOM05D006491 ORTHO05D008412 7.3e-22 109.4 157 39.5
SEGI_13660 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 1.6e-21 108.2 110 53.6
Hund26385 Selenicereus undatus HOM05D006491 ORTHO05D008412 1.8e-20 104.8 152 39.5
FAN07G0899 Fragaria x ananassa HOM05D006491 ORTHO05D008412 8.9e-20 102.4 183 35.0
CDE05G0295 Ceratophyllum demersum HOM05D006491 ORTHO05D008412 6.4e-18 96.3 183 35.5
Peaxi162Scf00532g00051 Petunia axillaris HOM05D006491 ORTHO05D008412 6.0e-16 89.7 191 32.5
SGA_v2.0_scaffold242G44258 Striga asiatica HOM05D006491 ORTHO05D008412 7.3e-14 82.8 71 56.3
arahy.Tifrunner.gnm1.ann1.6S8GSB Arachis hypogaea HOM05D006491 ORTHO05D008412 9.6e-14 82.4 110 44.5
SEGI_21199 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 6.0e-08 63.2 64 45.3


User provided reference genes

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