Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO14G254 Micromonas commoda HOM05D007563 ORTHO05D009546 2.3e-37 158.3 74 100.0
Mapoly0067s0084 Marchantia polymorpha HOM05D007563 ORTHO05D009546 8.4e-16 86.7 67 55.2
Rhsim09G0069800 Rhododendron simsii HOM05D007563 ORTHO05D009546 8.4e-16 86.7 62 62.9
Zm00001eb248280 Zea mays HOM05D007563 ORTHO05D009546 1.4e-15 85.9 74 56.8
Os02g0635700 Oryza sativa ssp. japonica HOM05D007563 ORTHO05D009546 1.9e-15 85.5 74 58.1
ATR0618G415 Amborella trichopoda HOM05D007563 ORTHO05D009546 2.4e-15 85.1 66 59.1
CANSAT78G0704 Cannabis sativa HOM05D007563 ORTHO05D009546 4.2e-15 84.3 66 60.6
Nitab4.5_0000069g0150 Nicotiana tabacum HOM05D007563 ORTHO05D009546 4.2e-15 84.3 63 60.3
Solyc01g008260.4 Solanum lycopersicum HOM05D007563 ORTHO05D009546 4.2e-15 84.3 63 60.3
Sopen01g003780 Solanum pennellii HOM05D007563 ORTHO05D009546 4.2e-15 84.3 63 60.3
PGSC0003DMG400016398 Solanum tuberosum HOM05D007563 ORTHO05D009546 4.2e-15 84.3 63 60.3
AT5G08320 Arabidopsis thaliana HOM05D007563 ORTHO05D009546 5.4e-15 84.0 67 56.7
CAN.G282.47 Capsicum annuum HOM05D007563 ORTHO05D009546 5.4e-15 84.0 63 60.3
PGR044G2202 Punica granatum HOM05D007563 ORTHO05D009546 5.4e-15 84.0 63 58.7
QL03p034961 Quercus lobata HOM05D007563 ORTHO05D009546 5.4e-15 84.0 67 58.2
AL6G18750 Arabidopsis lyrata HOM05D007563 ORTHO05D009546 7.1e-15 83.6 62 61.3
C02p03530 Brassica napus HOM05D007563 ORTHO05D009546 9.3e-15 83.2 67 58.2
BolC2t06312H Brassica oleracea HOM05D007563 ORTHO05D009546 9.3e-15 83.2 67 58.2
BraA02t04951Z Brassica rapa HOM05D007563 ORTHO05D009546 9.3e-15 83.2 67 58.2
CSS0014548 Camellia sinensis var. sinensis HOM05D007563 ORTHO05D009546 1.2e-14 82.8 62 59.7
Carub.0006s0721 Capsella rubella HOM05D007563 ORTHO05D009546 1.2e-14 82.8 67 59.7
MBI03_g13825_MAGBIO Magnolia biondii HOM05D007563 ORTHO05D009546 1.2e-14 82.8 67 58.2
Potri.005G090400 Populus trichocarpa HOM05D007563 ORTHO05D009546 1.2e-14 82.8 62 61.3
THA.LOC104818377 Tarenaya hassleriana HOM05D007563 ORTHO05D009546 1.2e-14 82.8 61 59.0
vmacro15986 Vaccinium macrocarpon HOM05D007563 ORTHO05D009546 1.2e-14 82.8 62 59.7
AagrBONN_evm.TU.Sc2ySwM_368.3197 Anthoceros agrestis HOM05D007563 ORTHO05D009546 1.6e-14 82.4 66 60.6
SEGI_01872 Sequoiadendron giganteum HOM05D007563 ORTHO05D009546 1.6e-14 82.4 67 53.7
CiPaw.05G170900 Carya illinoinensis HOM05D007563 ORTHO05D009546 2.1e-14 82.0 62 61.3
Cre01.g041351 Chlamydomonas reinhardtii HOM05D007563 ORTHO05D009546 2.1e-14 82.0 66 56.1
Nitab4.5_0002387g0070 Nicotiana tabacum HOM05D007563 ORTHO05D009546 2.1e-14 82.0 63 58.7
Peaxi162Scf00021g02222 Petunia axillaris HOM05D007563 ORTHO05D009546 2.1e-14 82.0 63 58.7
Lj3A848G48 Lonicera japonica HOM05D007563 ORTHO05D009546 2.7e-14 81.6 62 59.7
Ciclev10032938m.g Citrus clementina HOM05D007563 ORTHO05D009546 3.5e-14 81.3 60 61.7
ECA234G0294 Erigeron canadensis HOM05D007563 ORTHO05D009546 3.5e-14 81.3 60 60.0
Glyma.10G285700 Glycine max HOM05D007563 ORTHO05D009546 3.5e-14 81.3 67 55.2
CARHR204780 Cardamine hirsuta HOM05D007563 ORTHO05D009546 4.6e-14 80.9 61 60.7
COL.COLO4_33083 Corchorus olitorius HOM05D007563 ORTHO05D009546 6.0e-14 80.5 64 56.2
VMungo0720G1614 Vigna mungo HOM05D007563 ORTHO05D009546 6.0e-14 80.5 67 55.2
DCAR_026884 Daucus carota HOM05D007563 ORTHO05D009546 7.9e-14 80.1 60 60.0
Eucgr.J00882 Eucalyptus grandis HOM05D007563 ORTHO05D009546 7.9e-14 80.1 60 58.3
Thhalv10014924m.g Eutrema salsugineum HOM05D007563 ORTHO05D009546 7.9e-14 80.1 61 60.7
HanXRQChr16g0528531 Helianthus annuus HOM05D007563 ORTHO05D009546 7.9e-14 80.1 60 61.7
MD16G1243400 Malus domestica HOM05D007563 ORTHO05D009546 7.9e-14 80.1 60 58.3
Aa31LG3G18250 Aethionema arabicum HOM05D007563 ORTHO05D009546 1.0e-13 79.7 61 59.0
MSTRG.8089 Avicennia marina HOM05D007563 ORTHO05D009546 1.0e-13 79.7 70 55.7
Thecc.02G156900 Theobroma cacao HOM05D007563 ORTHO05D009546 1.0e-13 79.7 61 59.0
FAN12G1059 Fragaria x ananassa HOM05D007563 ORTHO05D009546 1.3e-13 79.3 60 60.0
Gohir.D13G060600 Gossypium hirsutum HOM05D007563 ORTHO05D009546 1.3e-13 79.3 61 57.4
RcHm_v2.0_Chr4g0398681 Rosa chinensis HOM05D007563 ORTHO05D009546 1.3e-13 79.3 60 60.0
TAR622G0982 Trochodendron aralioides HOM05D007563 ORTHO05D009546 1.3e-13 79.3 67 52.2
Duzib248G0691 Durio zibethinus HOM05D007563 ORTHO05D009546 1.8e-13 79.0 61 59.0
TWI53G1187 Tripterygium wilfordii HOM05D007563 ORTHO05D009546 1.8e-13 79.0 60 56.7
Gorai.013G068700 Gossypium raimondii HOM05D007563 ORTHO05D009546 2.3e-13 78.6 61 57.4
Nn3g18621 Nelumbo nucifera HOM05D007563 ORTHO05D009546 2.3e-13 78.6 67 53.7
Sp6g34630 Schrenkiella parvula HOM05D007563 ORTHO05D009546 2.3e-13 78.6 60 60.0
HPP92_005058 Vanilla planifolia HOM05D007563 ORTHO05D009546 2.3e-13 78.6 60 61.7
Gohir.A13G061300 Gossypium hirsutum HOM05D007563 ORTHO05D009546 3.0e-13 78.2 61 57.4
Phvul.007G015100 Phaseolus vulgaris HOM05D007563 ORTHO05D009546 3.0e-13 78.2 67 53.7
unitig_22.g6356 Utricularia gibba HOM05D007563 ORTHO05D009546 3.0e-13 78.2 60 61.7
PSO017G0076 Papaver somniferum HOM05D007563 ORTHO05D009546 3.9e-13 77.8 67 52.2
TPR.G4067 Trifolium pratense HOM05D007563 ORTHO05D009546 5.1e-13 77.4 70 51.4
FvH4_4g06750 Fragaria vesca HOM05D007563 ORTHO05D009546 6.7e-13 77.0 60 58.3
PSO478G0646 Papaver somniferum HOM05D007563 ORTHO05D009546 8.7e-13 76.6 67 53.7
Psat6g233640 Pisum sativum HOM05D007563 ORTHO05D009546 8.7e-13 76.6 70 50.0
Prupe.1G070600 Prunus persica HOM05D007563 ORTHO05D009546 8.7e-13 76.6 59 57.6
Atru.chr11.1116 Acer truncatum HOM05D007563 ORTHO05D009546 1.1e-12 76.3 60 55.0
Cfa008765 Carpinus fangiana HOM05D007563 ORTHO05D009546 1.1e-12 76.3 59 57.6
CDE04G1527 Ceratophyllum demersum HOM05D007563 ORTHO05D009546 1.1e-12 76.3 74 50.0
Nitab4.5_0000069g0170 Nicotiana tabacum HOM05D007563 ORTHO05D009546 1.1e-12 76.3 63 57.1
EL10Ac9g22975 Beta vulgaris HOM05D007563 ORTHO05D009546 1.5e-12 75.9 63 54.0
AUR62017724 Chenopodium quinoa HOM05D007563 ORTHO05D009546 1.5e-12 75.9 63 55.6
Lsat_1_v5_gn_4_64620 Lactuca sativa HOM05D007563 ORTHO05D009546 1.5e-12 75.9 59 57.6
Lalb_Chr06g0163901 Lupinus albus HOM05D007563 ORTHO05D009546 1.5e-12 75.9 67 52.2
Medtr1g114370 Medicago truncatula HOM05D007563 ORTHO05D009546 1.5e-12 75.9 70 52.9
SMO201G0195 Selaginella moellendorffii HOM05D007563 ORTHO05D009546 1.5e-12 75.9 59 59.3
AUR62032956 Chenopodium quinoa HOM05D007563 ORTHO05D009546 2.5e-12 75.1 63 55.6
Ca_11254_v3 Cicer arietinum L. HOM05D007563 ORTHO05D009546 2.5e-12 75.1 70 50.0
Hund24382 Selenicereus undatus HOM05D007563 ORTHO05D009546 2.5e-12 75.1 70 52.9
Sc21g0003780 Simmondsia chinensis HOM05D007563 ORTHO05D009546 2.5e-12 75.1 67 52.2
GSVIVG01026146001 Vitis vinifera HOM05D007563 ORTHO05D009546 3.3e-12 74.7 67 53.7
Lj5g0022450 Lotus japonicus HOM05D007563 ORTHO05D009546 4.3e-12 74.3 60 55.0
Hma1.2p1_0513F.1_g169460 Hydrangea macrophylla HOM05D007563 ORTHO05D009546 7.4e-12 73.6 60 55.0
arahy.Tifrunner.gnm1.ann1.B4R3WF Arachis hypogaea HOM05D007563 ORTHO05D009546 2.8e-11 71.6 61 54.1
Aqoxy2G00835 Aquilegia oxysepala HOM05D007563 ORTHO05D009546 8.1e-11 70.1 60 56.7
CBR_g24157 Chara braunii HOM05D007563 ORTHO05D009546 1.1e-10 69.7 46 65.2
arahy.Tifrunner.gnm1.ann1.02I6X5 Arachis hypogaea HOM05D007563 ORTHO05D009546 1.4e-10 69.3 61 52.5
Pp3c13_24580 Physcomitrium patens HOM05D007563 ORTHO05D009546 3.1e-10 68.2 65 52.3
BcaC03g13222 Brassica carinata HOM05D007563 ORTHO05D009546 5.3e-10 67.4 50 62.0
Cc00_g07880 Coffea canephora HOM05D007563 ORTHO05D009546 1.0e-08 63.2 42 66.7
Sabra05G0074500 Salix brachista HOM05D007563 ORTHO05D009546 1.0e-08 63.2 43 65.1
Oeu013196.2 Olea europaea HOM05D007563 ORTHO05D009546 1.3e-08 62.8 94 38.3
PRCOL_00006925 Prasinoderma coloniale HOM05D007563 ORTHO05D009546 6.5e-08 60.5 42 64.3
Haze_11776 Corylus avellana HOM05D007563 ORTHO05D009546 2.5e-07 58.5 41 63.4
Migut.O00860 Erythranthe guttata HOM05D007563 ORTHO05D009546 1.6e-06 55.8 43 53.5


User provided reference genes

Program Settings