Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO14G174 Micromonas commoda HOM05D004498 ORTHO05D005300 2.6e-270 934.9 488 100.0
Mapoly0124s0016 Marchantia polymorpha HOM05D004498 ORTHO05D005300 8.2e-51 205.7 521 31.7
ATR0745G086 Amborella trichopoda HOM05D004498 ORTHO05D005300 2.0e-49 201.1 438 34.9
Migut.D02110 Erythranthe guttata HOM05D004498 ORTHO05D005300 3.4e-49 200.3 430 34.7
Migut.G01103 Erythranthe guttata HOM05D004498 ORTHO05D005300 4.5e-49 199.9 430 33.7
Solyc05g051630.4 Solanum lycopersicum HOM05D004498 ORTHO05D005300 5.9e-49 199.5 507 31.6
Atru.chr1.817 Acer truncatum HOM05D004498 ORTHO05D005300 1.1e-47 195.3 434 33.4
SMO200G0031 Selaginella moellendorffii HOM05D004498 ORTHO05D005300 3.2e-47 193.7 517 31.1
Cc02_g04430 Coffea canephora HOM05D004498 ORTHO05D005300 7.2e-47 192.6 508 31.9
Eucgr.G03077 Eucalyptus grandis HOM05D004498 ORTHO05D005300 2.7e-46 190.7 435 32.9
Manes.14G037200 Manihot esculenta HOM05D004498 ORTHO05D005300 2.7e-46 190.7 512 31.2
Ciclev10004737m.g Citrus clementina HOM05D004498 ORTHO05D005300 4.6e-46 189.9 444 34.0
CAN.G937.4 Capsicum annuum HOM05D004498 ORTHO05D005300 1.0e-45 188.7 508 30.1
Gorai.008G215300 Gossypium raimondii HOM05D004498 ORTHO05D005300 1.0e-45 188.7 465 34.0
Gohir.D12G200100 Gossypium hirsutum HOM05D004498 ORTHO05D005300 1.4e-45 188.3 467 32.1
Gohir.A12G197600 Gossypium hirsutum HOM05D004498 ORTHO05D005300 1.8e-45 188.0 486 32.9
Thecc.03G153100 Theobroma cacao HOM05D004498 ORTHO05D005300 1.8e-45 188.0 471 32.3
Cfa008145 Carpinus fangiana HOM05D004498 ORTHO05D005300 2.3e-45 187.6 465 32.9
Actinidia24991 Actinidia chinensis HOM05D004498 ORTHO05D005300 2.0e-44 184.5 472 30.3
Hma1.2p1_0432F.1_g151900 Hydrangea macrophylla HOM05D004498 ORTHO05D005300 2.6e-44 184.1 473 31.7
Sed0003630 Sechium edule HOM05D004498 ORTHO05D005300 5.7e-44 183.0 512 30.3
Sc15g0000230 Simmondsia chinensis HOM05D004498 ORTHO05D005300 9.7e-44 182.2 514 30.9
TAR375G0984 Trochodendron aralioides HOM05D004498 ORTHO05D005300 9.7e-44 182.2 473 31.9
COL.COLO4_14097 Corchorus olitorius HOM05D004498 ORTHO05D005300 1.3e-43 181.8 464 31.7
SalBow7G0508 Salvia bowleyana HOM05D004498 ORTHO05D005300 1.3e-43 181.8 424 32.1
QL09p005249 Quercus lobata HOM05D004498 ORTHO05D005300 1.7e-43 181.4 466 32.0
GSVIVG01014038001 Vitis vinifera HOM05D004498 ORTHO05D005300 1.7e-43 181.4 474 31.2
Phvul.011G007100 Phaseolus vulgaris HOM05D004498 ORTHO05D005300 2.8e-43 180.6 464 32.3
CiPaw.03G020300 Carya illinoinensis HOM05D004498 ORTHO05D005300 3.7e-43 180.3 470 31.7
ClCG07G016840 Citrullus lanatus HOM05D004498 ORTHO05D005300 6.3e-43 179.5 506 31.0
THA.LOC104819414 Tarenaya hassleriana HOM05D004498 ORTHO05D005300 6.3e-43 179.5 519 31.2
Aqoxy3G03912 Aquilegia oxysepala HOM05D004498 ORTHO05D005300 1.1e-42 178.7 494 30.4
Migut.G01144 Erythranthe guttata HOM05D004498 ORTHO05D005300 1.1e-42 178.7 406 33.7
Glyma.09G230400 Glycine max HOM05D004498 ORTHO05D005300 1.1e-42 178.7 473 31.3
Lj8A44G33 Lonicera japonica HOM05D004498 ORTHO05D005300 1.1e-42 178.7 419 33.7
AT5G07630 Arabidopsis thaliana HOM05D004498 ORTHO05D005300 1.4e-42 178.3 436 31.9
Carub.0006s0661 Capsella rubella HOM05D004498 ORTHO05D005300 1.4e-42 178.3 512 31.4
ECA233G4878 Erigeron canadensis HOM05D004498 ORTHO05D005300 1.4e-42 178.3 511 28.8
CsaV3_4G004040 Cucumis sativus L. HOM05D004498 ORTHO05D005300 1.8e-42 177.9 465 31.8
Potri.001G126200 Populus trichocarpa HOM05D004498 ORTHO05D005300 1.8e-42 177.9 464 31.2
HanXRQChr05g0142551 Helianthus annuus HOM05D004498 ORTHO05D005300 3.1e-42 177.2 424 31.6
Psat6g142360 Pisum sativum HOM05D004498 ORTHO05D005300 3.1e-42 177.2 453 31.6
Thhalv10013248m.g Eutrema salsugineum HOM05D004498 ORTHO05D005300 4.1e-42 176.8 434 31.3
PSO210G0611 Papaver somniferum HOM05D004498 ORTHO05D005300 5.3e-42 176.4 428 32.2
PGR119G0143 Punica granatum HOM05D004498 ORTHO05D005300 6.9e-42 176.0 431 31.6
Psat6g116600 Pisum sativum HOM05D004498 ORTHO05D005300 9.1e-42 175.6 448 32.1
BcaC06g32495 Brassica carinata HOM05D004498 ORTHO05D005300 1.2e-41 175.3 429 31.5
Sp6g35240 Schrenkiella parvula HOM05D004498 ORTHO05D005300 1.2e-41 175.3 436 31.9
TPR.G3665 Trifolium pratense HOM05D004498 ORTHO05D005300 1.5e-41 174.9 465 31.4
BcaC03g13193 Brassica carinata HOM05D004498 ORTHO05D005300 2.0e-41 174.5 436 31.9
C02p03220 Brassica napus HOM05D004498 ORTHO05D005300 2.0e-41 174.5 436 31.9
Rhsim03G0165600 Rhododendron simsii HOM05D004498 ORTHO05D005300 2.0e-41 174.5 498 30.3
BcaB05g21603 Brassica carinata HOM05D004498 ORTHO05D005300 3.4e-41 173.7 436 31.9
Glyma.12G006200 Glycine max HOM05D004498 ORTHO05D005300 5.9e-41 172.9 473 30.7
Medtr4g036550 Medicago truncatula HOM05D004498 ORTHO05D005300 7.7e-41 172.6 463 31.3
PSO210G1345 Papaver somniferum HOM05D004498 ORTHO05D005300 7.7e-41 172.6 508 30.7
Nn1g09651 Nelumbo nucifera HOM05D004498 ORTHO05D005300 1.3e-40 171.8 427 32.6
A10p29360 Brassica napus HOM05D004498 ORTHO05D005300 1.7e-40 171.4 432 31.7
Ca_02786_v3 Cicer arietinum L. HOM05D004498 ORTHO05D005300 2.2e-40 171.0 466 30.5
Lj3g0015680 Lotus japonicus HOM05D004498 ORTHO05D005300 2.2e-40 171.0 465 31.0
AL3G21620 Arabidopsis lyrata HOM05D004498 ORTHO05D005300 2.9e-40 170.6 434 32.7
BraA10t44979Z Brassica rapa HOM05D004498 ORTHO05D005300 2.9e-40 170.6 434 31.6
HPP92_003455 Vanilla planifolia HOM05D004498 ORTHO05D005300 3.8e-40 170.2 469 29.2
MD11G1042200 Malus domestica HOM05D004498 ORTHO05D005300 8.5e-40 169.1 464 30.6
AL6G17950 Arabidopsis lyrata HOM05D004498 ORTHO05D005300 1.4e-39 168.3 513 29.0
Carub.0003s0947 Capsella rubella HOM05D004498 ORTHO05D005300 3.2e-39 167.2 504 29.4
Lalb_Chr04g0258171 Lupinus albus HOM05D004498 ORTHO05D005300 4.2e-39 166.8 474 29.3
Prupe.6G033300 Prunus persica HOM05D004498 ORTHO05D005300 5.5e-39 166.4 464 30.0
Sabra01G0097300 Salix brachista HOM05D004498 ORTHO05D005300 5.5e-39 166.4 422 32.2
AagrBONN_evm.TU.Sc2ySwM_362.1167 Anthoceros agrestis HOM05D004498 ORTHO05D005300 1.2e-38 165.2 415 31.3
FvH4_3g41750 Fragaria vesca HOM05D004498 ORTHO05D005300 1.2e-38 165.2 467 29.3
Hund20838 Selenicereus undatus HOM05D004498 ORTHO05D005300 2.1e-38 164.5 349 35.2
FAN11G1420 Fragaria x ananassa HOM05D004498 ORTHO05D005300 4.7e-38 163.3 480 30.0
Pp3c18_8280 Physcomitrium patens HOM05D004498 ORTHO05D005300 6.1e-38 162.9 478 30.3
RcHm_v2.0_Chr5g0074831 Rosa chinensis HOM05D004498 ORTHO05D005300 1.4e-37 161.8 467 29.3
MELO3C017661.2 Cucumis melo HOM05D004498 ORTHO05D005300 5.2e-37 159.8 398 31.7
CSS0042388 Camellia sinensis var. sinensis HOM05D004498 ORTHO05D005300 6.7e-37 159.5 393 30.0
Sopen05g030080 Solanum pennellii HOM05D004498 ORTHO05D005300 6.7e-37 159.5 396 32.6
arahy.Tifrunner.gnm1.ann1.LBI7WJ Arachis hypogaea HOM05D004498 ORTHO05D005300 1.5e-36 158.3 418 31.6
TWI23G0902 Tripterygium wilfordii HOM05D004498 ORTHO05D005300 2.0e-36 157.9 432 28.9
Dinv16848 Davidia involucrata HOM05D004498 ORTHO05D005300 7.4e-36 156.0 349 34.1
FAN16G2392 Fragaria x ananassa HOM05D004498 ORTHO05D005300 1.3e-35 155.2 417 30.2
Duzib084G1021 Durio zibethinus HOM05D004498 ORTHO05D005300 2.8e-35 154.1 446 31.4
BolC2t06286H Brassica oleracea HOM05D004498 ORTHO05D005300 3.7e-35 153.7 410 31.5
BraA02t04927Z Brassica rapa HOM05D004498 ORTHO05D005300 6.3e-35 152.9 410 31.5
AUR62009833 Chenopodium quinoa HOM05D004498 ORTHO05D005300 3.1e-34 150.6 396 30.1
DCAR_009449 Daucus carota HOM05D004498 ORTHO05D005300 7.0e-34 149.4 356 33.4
Zm00001eb105090 Zea mays HOM05D004498 ORTHO05D005300 1.2e-33 148.7 484 27.9
Lsat_1_v5_gn_8_10281 Lactuca sativa HOM05D004498 ORTHO05D005300 2.2e-32 144.4 411 30.4
FAN25G1514 Fragaria x ananassa HOM05D004498 ORTHO05D005300 5.0e-32 143.3 454 28.4
SGA_v2.0_scaffold92G28289 Striga asiatica HOM05D004498 ORTHO05D005300 1.9e-31 141.4 351 31.1
Nitab4.5_0001187g0110 Nicotiana tabacum HOM05D004498 ORTHO05D005300 2.5e-31 141.0 459 29.6
Aa31LG3G18790 Aethionema arabicum HOM05D004498 ORTHO05D005300 5.5e-31 139.8 434 27.9
vmacro22807 Vaccinium macrocarpon HOM05D004498 ORTHO05D005300 5.5e-31 139.8 419 30.8
Ah.15g094140 Amaranthus hybridus HOM05D004498 ORTHO05D005300 1.6e-30 138.3 520 27.7
Manes.06G133200 Manihot esculenta HOM05D004498 ORTHO05D005300 2.7e-30 137.5 429 29.4
Peaxi162Scf00167g00733 Petunia axillaris HOM05D004498 ORTHO05D005300 3.6e-30 137.1 402 29.9
Oeu022469.1 Olea europaea HOM05D004498 ORTHO05D005300 4.7e-30 136.7 291 34.0
Cre11.g467726 Chlamydomonas reinhardtii HOM05D004498 ORTHO05D005300 8.0e-30 136.0 652 24.7
AagrBONN_evm.TU.Sc2ySwM_362.1160 Anthoceros agrestis HOM05D004498 ORTHO05D005300 4.0e-29 133.7 411 29.4
SGA_v2.0_scaffold115G32141 Striga asiatica HOM05D004498 ORTHO05D005300 2.0e-28 131.3 291 33.3
FAN21G3639 Fragaria x ananassa HOM05D004498 ORTHO05D005300 2.6e-28 131.0 354 29.4
unitig_578.g16611 Utricularia gibba HOM05D004498 ORTHO05D005300 9.7e-28 129.0 320 30.0
EL10Ac7g16351 Beta vulgaris HOM05D004498 ORTHO05D005300 1.3e-27 128.6 431 25.5
C09p69720 Brassica napus HOM05D004498 ORTHO05D005300 3.7e-27 127.1 312 31.4
BolC9t59715H Brassica oleracea HOM05D004498 ORTHO05D005300 3.7e-27 127.1 312 31.4
Dinv06575 Davidia involucrata HOM05D004498 ORTHO05D005300 7.0e-26 122.9 441 27.4
SHI13988 Sapria himalayana HOM05D004498 ORTHO05D005300 9.1e-26 122.5 344 28.2
arahy.Tifrunner.gnm1.ann1.V9VPQR Arachis hypogaea HOM05D004498 ORTHO05D005300 2.7e-25 120.9 425 28.7
Migut.A00970 Erythranthe guttata HOM05D004498 ORTHO05D005300 2.1e-22 111.3 205 34.1
CARHR205520 Cardamine hirsuta HOM05D004498 ORTHO05D005300 8.8e-21 105.9 265 32.1
Rhsim07G0010200 Rhododendron simsii HOM05D004498 ORTHO05D005300 1.5e-20 105.1 326 29.4
PRCOL_00001376 Prasinoderma coloniale HOM05D004498 ORTHO05D005300 4.4e-20 103.6 543 26.3
GSVIVG01037114001 Vitis vinifera HOM05D004498 ORTHO05D005300 4.4e-20 103.6 324 30.2
Nitab4.5_0002764g0030 Nicotiana tabacum HOM05D004498 ORTHO05D005300 5.7e-20 103.2 391 27.6
arahy.Tifrunner.gnm1.ann1.XAT8RN Arachis hypogaea HOM05D004498 ORTHO05D005300 2.2e-19 101.3 242 35.1
CDE02G4122 Ceratophyllum demersum HOM05D004498 ORTHO05D005300 1.8e-18 98.2 184 34.8
SEGI_20056 Sequoiadendron giganteum HOM05D004498 ORTHO05D005300 4.5e-17 93.6 189 34.9
Os07g0486100 Oryza sativa ssp. japonica HOM05D004498 ORTHO05D005300 2.5e-15 87.8 197 32.5
Oeu042546.1 Olea europaea HOM05D004498 ORTHO05D005300 1.2e-14 85.5 205 28.3
Nitab4.5_0000818g0240 Nicotiana tabacum HOM05D004498 ORTHO05D005300 1.5e-12 78.6 259 27.0
SEGI_28281 Sequoiadendron giganteum HOM05D004498 ORTHO05D005300 6.6e-08 63.2 122 37.7
Actinidia13585 Actinidia chinensis HOM05D004498 ORTHO05D005300 8.6e-08 62.8 151 30.5
Cfa025118 Carpinus fangiana HOM05D004498 ORTHO05D005300 8.0e-06 56.2 202 29.2


User provided reference genes

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