Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO14G031 Micromonas commoda HOM05D018879 ORTHO05D018932 3.3e-287 991.1 539 100.0
MCO14G228 Micromonas commoda HOM05D018879 ORTHO05D018932 3.3e-287 991.1 539 100.0
PRCOL_00002407 Prasinoderma coloniale HOM05D018879 ORTHO05D018932 2.5e-93 347.1 613 38.3
MCO03G398 Micromonas commoda HOM05D018879 ORTHO05D018932 1.2e-47 195.3 394 35.3
PRCOL_00000753 Prasinoderma coloniale HOM05D018879 ORTHO05D018932 2.3e-46 191.0 610 28.2
MCO02G055 Micromonas commoda HOM05D018879 ORTHO05D018932 5.5e-24 116.7 186 37.1
PRCOL_00000097 Prasinoderma coloniale HOM05D018879 ORTHO05D018932 9.4e-24 115.9 221 35.3
MD15G1219100 Malus domestica HOM05D001055 ORTHO05D000867 5.0e-09 67.0 486 22.8
HanXRQChr13g0413001 Helianthus annuus HOM05D005743 ORTHO05D007031 2.5e-08 64.7 146 32.9
Potri.019G040200 Populus trichocarpa HOM05D001055 ORTHO05D000867 5.6e-08 63.5 476 23.5
Pp3c2_6060 Physcomitrium patens HOM05D005743 ORTHO05D007031 7.2e-08 63.2 487 22.8
EL10Ac7g17510 Beta vulgaris HOM05D005743 ORTHO05D007031 1.6e-07 62.0 115 37.4
PGR044G1461 Punica granatum HOM05D005743 ORTHO05D007031 2.1e-07 61.6 141 33.3
CBR_g45377 Chara braunii HOM05D001055 ORTHO05D000867 2.8e-07 61.2 152 24.3
DCAR_005790 Daucus carota HOM05D005743 ORTHO05D007031 2.8e-07 61.2 138 35.5
RcHm_v2.0_Chr6g0294071 Rosa chinensis HOM05D005743 ORTHO05D007031 2.8e-07 61.2 119 35.3
Atru.chr7.1720 Acer truncatum HOM05D001055 ORTHO05D000867 3.6e-07 60.8 508 22.6
CANSAT25G1370 Cannabis sativa HOM05D005743 ORTHO05D007031 4.7e-07 60.5 118 35.6
HPP92_006130 Vanilla planifolia HOM05D001055 ORTHO05D000867 4.7e-07 60.5 480 21.5
Oeu046676.1 Olea europaea HOM05D005743 ORTHO05D007031 6.1e-07 60.1 141 34.0
AUR62008667 Chenopodium quinoa HOM05D005743 ORTHO05D007031 8.0e-07 59.7 115 33.9
Pp3c9_2210 Physcomitrium patens HOM05D001055 ORTHO05D000867 1.0e-06 59.3 211 24.6
Sabra13G0057500 Salix brachista HOM05D001055 ORTHO05D000867 1.0e-06 59.3 502 21.7
Thhalv10016097m.g Eutrema salsugineum HOM05D001055 ORTHO05D000867 1.4e-06 58.9 485 22.9
Sc05g0003780 Simmondsia chinensis HOM05D005743 ORTHO05D007031 1.4e-06 58.9 123 35.0
Actinidia24820 Actinidia chinensis HOM05D005743 ORTHO05D007031 1.8e-06 58.5 119 33.6
Migut.D00150 Erythranthe guttata HOM05D005743 ORTHO05D007031 1.8e-06 58.5 115 35.7
SMO119G0232 Selaginella moellendorffii HOM05D001055 ORTHO05D000867 1.8e-06 58.5 479 19.2
Thecc.01G301000 Theobroma cacao HOM05D005743 ORTHO05D007031 1.8e-06 58.5 119 36.1
BcaB08g36736 Brassica carinata HOM05D001055 ORTHO05D000867 2.3e-06 58.2 487 22.6
C09p59260 Brassica napus HOM05D001055 ORTHO05D000867 2.3e-06 58.2 498 22.9
Hma1.2p1_0491F.1_g164590 Hydrangea macrophylla HOM05D005743 ORTHO05D007031 2.3e-06 58.2 118 34.7
Psat6g165240 Pisum sativum HOM05D005743 ORTHO05D007031 2.3e-06 58.2 114 36.8
BcaB05g23285 Brassica carinata HOM05D001055 ORTHO05D000867 3.0e-06 57.8 491 23.6
Carub.0004s3033 Capsella rubella HOM05D005743 ORTHO05D007031 3.0e-06 57.8 153 32.7
FvH4_2g25770 Fragaria vesca HOM05D005743 ORTHO05D007031 3.0e-06 57.8 114 36.0
FAN15G2676 Fragaria x ananassa HOM05D005743 ORTHO05D007031 3.0e-06 57.8 114 36.0
FAN20G0637 Fragaria x ananassa HOM05D005743 ORTHO05D007031 3.0e-06 57.8 114 36.0
FAN24G1083 Fragaria x ananassa HOM05D005743 ORTHO05D007031 3.0e-06 57.8 114 36.0
FAN27G1322 Fragaria x ananassa HOM05D005743 ORTHO05D007031 3.0e-06 57.8 114 36.0
Glyma.10G018000 Glycine max HOM05D005743 ORTHO05D007031 4.0e-06 57.4 114 36.0
GSVIVG01015063001 Vitis vinifera HOM05D001055 ORTHO05D000867 4.0e-06 57.4 512 22.3
AT5G17860 Arabidopsis thaliana HOM05D001055 ORTHO05D000867 5.2e-06 57.0 494 23.5
CAN.G1989.8 Capsicum annuum HOM05D005743 ORTHO05D007031 5.2e-06 57.0 111 36.0
PSO170G2277 Papaver somniferum HOM05D005743 ORTHO05D007031 5.2e-06 57.0 114 35.1
SEGI_24981 Sequoiadendron giganteum HOM05D001055 ORTHO05D000867 5.2e-06 57.0 506 22.9
TPR.G33974 Trifolium pratense HOM05D005743 ORTHO05D007031 5.2e-06 57.0 114 36.0
Atru.chr5.1142 Acer truncatum HOM05D005743 ORTHO05D007031 6.8e-06 56.6 91 38.5
Aa31LG1G28940 Aethionema arabicum HOM05D005743 ORTHO05D007031 6.8e-06 56.6 153 32.0
BcaC04g18754 Brassica carinata HOM05D001055 ORTHO05D000867 6.8e-06 56.6 498 22.7
BolC9t58767H Brassica oleracea HOM05D001055 ORTHO05D000867 6.8e-06 56.6 498 22.7
MD02G1094200 Malus domestica HOM05D001055 ORTHO05D000867 6.8e-06 56.6 484 21.3
Hund18172 Selenicereus undatus HOM05D005743 ORTHO05D007031 6.8e-06 56.6 115 35.7
SEGI_24798 Sequoiadendron giganteum HOM05D005743 ORTHO05D007031 6.8e-06 56.6 156 28.8
THA.LOC104817489 Tarenaya hassleriana HOM05D005743 ORTHO05D007031 6.8e-06 56.6 141 34.0
Thhalv10001391m.g Eutrema salsugineum HOM05D005743 ORTHO05D007031 8.9e-06 56.2 150 33.3
Gohir.D11G119400 Gossypium hirsutum HOM05D005743 ORTHO05D007031 8.9e-06 56.2 118 34.7
Gorai.007G127900 Gossypium raimondii HOM05D005743 ORTHO05D007031 8.9e-06 56.2 118 34.7
Sabra19G0050500 Salix brachista HOM05D001055 ORTHO05D000867 8.9e-06 56.2 452 22.3
Solyc06g009130.3 Solanum lycopersicum HOM05D005743 ORTHO05D007031 8.9e-06 56.2 141 32.6
Sopen06g003890 Solanum pennellii HOM05D005743 ORTHO05D007031 8.9e-06 56.2 141 32.6
vmacro15016 Vaccinium macrocarpon HOM05D005743 ORTHO05D007031 8.9e-06 56.2 91 38.5


User provided reference genes

Program Settings