Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO13G582 Micromonas commoda HOM05D007294 ORTHO05D009205 3.9e-146 521.5 284 100.0
SMO145G0156 Selaginella moellendorffii HOM05D007294 ORTHO05D009205 2.7e-14 83.6 112 42.9
Glyma.04G251200 Glycine max HOM05D007294 ORTHO05D009205 1.0e-13 81.6 104 44.2
Hund16850 Selenicereus undatus HOM05D007294 ORTHO05D009205 1.0e-13 81.6 102 44.1
MSTRG.22416 Avicennia marina HOM05D007294 ORTHO05D009205 1.4e-13 81.3 104 44.2
Glyma.06G111500 Glycine max HOM05D007294 ORTHO05D009205 3.0e-13 80.1 106 45.3
Carub.0006s2684 Capsella rubella HOM05D007294 ORTHO05D009205 3.9e-13 79.7 103 45.6
Eucgr.F03776 Eucalyptus grandis HOM05D007294 ORTHO05D009205 3.9e-13 79.7 105 44.8
CiPaw.06G028900 Carya illinoinensis HOM05D007294 ORTHO05D009205 5.2e-13 79.3 104 46.2
COL.COLO4_12212 Corchorus olitorius HOM05D007294 ORTHO05D009205 6.7e-13 79.0 81 46.9
Nn5g28204 Nelumbo nucifera HOM05D007294 ORTHO05D009205 8.8e-13 78.6 114 42.1
Oeu026142.1 Olea europaea HOM05D007294 ORTHO05D009205 8.8e-13 78.6 103 40.8
MD08G1165800 Malus domestica HOM05D007294 ORTHO05D009205 1.1e-12 78.2 103 42.7
PGR042G2863 Punica granatum HOM05D007294 ORTHO05D009205 1.1e-12 78.2 103 41.7
Eucgr.F03773 Eucalyptus grandis HOM05D007294 ORTHO05D009205 1.5e-12 77.8 105 43.8
MBI03_g33023_MAGBIO Magnolia biondii HOM05D007294 ORTHO05D009040 1.5e-12 77.8 94 46.8
Zm00001eb256090 Zea mays HOM05D007294 ORTHO05D009205 1.5e-12 77.8 112 44.6
CBR_g48307 Chara braunii HOM05D007294 ORTHO05D009205 2.0e-12 77.4 123 37.4
Lsat_1_v5_gn_6_112740 Lactuca sativa HOM05D007294 ORTHO05D009205 2.0e-12 77.4 108 37.0
Sed0003401 Sechium edule HOM05D007294 ORTHO05D009205 2.0e-12 77.4 112 42.0
AT4G08280 Arabidopsis thaliana HOM05D007294 ORTHO05D009205 2.6e-12 77.0 109 43.1
Phvul.009G123500 Phaseolus vulgaris HOM05D007294 ORTHO05D009205 2.6e-12 77.0 104 39.4
SGA_v2.0_scaffold25G11113 Striga asiatica HOM05D007294 ORTHO05D009205 2.6e-12 77.0 95 46.3
DCAR_014100 Daucus carota HOM05D007294 ORTHO05D009205 3.3e-12 76.6 112 39.3
Dinv27334 Davidia involucrata HOM05D007294 ORTHO05D009205 3.3e-12 76.6 98 40.8
unitig_61.g26063 Utricularia gibba HOM05D007294 ORTHO05D009205 3.3e-12 76.6 115 39.1
Actinidia23070 Actinidia chinensis HOM05D007294 ORTHO05D009205 4.4e-12 76.3 114 40.4
AL6G42020 Arabidopsis lyrata HOM05D007294 ORTHO05D009205 4.4e-12 76.3 113 41.6
Gorai.009G244600 Gossypium raimondii HOM05D007294 ORTHO05D009205 4.4e-12 76.3 99 45.5
RcHm_v2.0_Chr6g0295521 Rosa chinensis HOM05D007294 ORTHO05D009205 4.4e-12 76.3 104 40.4
Gohir.A05G233900 Gossypium hirsutum HOM05D007294 ORTHO05D009205 5.7e-12 75.9 90 45.6
Lalb_Chr11g0065821 Lupinus albus HOM05D007294 ORTHO05D009205 5.7e-12 75.9 98 44.9
Medtr3g072590 Medicago truncatula HOM05D007294 ORTHO05D009205 5.7e-12 75.9 113 38.1
Sp6g09730 Schrenkiella parvula HOM05D007294 ORTHO05D009205 5.7e-12 75.9 102 44.1
Prupe.1G500700 Prunus persica HOM05D007294 ORTHO05D009205 7.4e-12 75.5 105 41.0
AUR62023647 Chenopodium quinoa HOM05D007294 ORTHO05D009205 9.7e-12 75.1 109 39.4
Atru.chr13.1423 Acer truncatum HOM05D007294 ORTHO05D009205 1.3e-11 74.7 82 45.1
Aqoxy6G00180 Aquilegia oxysepala HOM05D007294 ORTHO05D009205 1.3e-11 74.7 105 41.0
MELO3C010470.2 Cucumis melo HOM05D007294 ORTHO05D009205 1.3e-11 74.7 99 42.4
Migut.N03292 Erythranthe guttata HOM05D007294 ORTHO05D009205 1.3e-11 74.7 136 36.0
FvH4_2g26680 Fragaria vesca HOM05D007294 ORTHO05D009205 1.3e-11 74.7 101 39.6
FAN20G0043 Fragaria x ananassa HOM05D007294 ORTHO05D009205 1.3e-11 74.7 102 42.2
FAN24G1632 Fragaria x ananassa HOM05D007294 ORTHO05D009205 1.3e-11 74.7 101 39.6
Os02g0767900 Oryza sativa ssp. japonica HOM05D007294 ORTHO05D009205 1.3e-11 74.7 127 42.5
PSO528G0176 Papaver somniferum HOM05D007294 ORTHO05D009205 1.3e-11 74.7 99 41.4
CANSAT25G2515 Cannabis sativa HOM05D007294 ORTHO05D009205 1.7e-11 74.3 109 39.4
Duzib093G0485 Durio zibethinus HOM05D007294 ORTHO05D009205 1.7e-11 74.3 96 42.7
TAR628G0157 Trochodendron aralioides HOM05D007294 ORTHO05D009205 1.7e-11 74.3 103 40.8
arahy.Tifrunner.gnm1.ann1.D4BK2C Arachis hypogaea HOM05D007294 ORTHO05D009205 2.2e-11 73.9 99 40.4
arahy.Tifrunner.gnm1.ann1.NH3KYE Arachis hypogaea HOM05D007294 ORTHO05D009205 2.2e-11 73.9 99 40.4
BcaC05g27437 Brassica carinata HOM05D007294 ORTHO05D009205 2.2e-11 73.9 89 44.9
BraA05t20931Z Brassica rapa HOM05D007294 ORTHO05D009205 2.2e-11 73.9 89 44.9
Haze_00466 Corylus avellana HOM05D007294 ORTHO05D009205 2.2e-11 73.9 72 50.0
CsaV3_4G028350 Cucumis sativus L. HOM05D007294 ORTHO05D009205 2.2e-11 73.9 110 40.0
Potri.002G085200 Populus trichocarpa HOM05D007294 ORTHO05D009205 2.2e-11 73.9 104 44.2
Sabra02G0066700 Salix brachista HOM05D007294 ORTHO05D009205 2.2e-11 73.9 104 44.2
Ca_15198_v3 Cicer arietinum L. HOM05D007294 ORTHO05D009205 2.8e-11 73.6 107 40.2
TWI36G0375 Tripterygium wilfordii HOM05D007294 ORTHO05D009205 2.8e-11 73.6 117 39.3
CSS0025261 Camellia sinensis var. sinensis HOM05D007294 ORTHO05D009205 3.7e-11 73.2 135 37.8
HanXRQChr05g0151051 Helianthus annuus HOM05D007294 ORTHO05D009205 3.7e-11 73.2 117 35.0
Aa31LG9G14290 Aethionema arabicum HOM05D007294 ORTHO05D009205 4.8e-11 72.8 97 42.3
Hma1.2p1_0186F.1_g081585 Hydrangea macrophylla HOM05D007294 ORTHO05D009205 6.3e-11 72.4 107 40.2
Thecc.08G122800 Theobroma cacao HOM05D007294 ORTHO05D009205 6.3e-11 72.4 112 41.1
Dinv40407 Davidia involucrata HOM05D007294 ORTHO05D009205 8.2e-11 72.0 86 39.5
Lj1g0002873 Lotus japonicus HOM05D007294 ORTHO05D009205 8.2e-11 72.0 126 37.3
Psat0s375g0040 Pisum sativum HOM05D007294 ORTHO05D009205 8.2e-11 72.0 131 38.2
Sc01g0001240 Simmondsia chinensis HOM05D007294 ORTHO05D009205 8.2e-11 72.0 104 37.5
Solyc11g012940.2 Solanum lycopersicum HOM05D007294 ORTHO05D009205 8.2e-11 72.0 88 42.0
Sopen11g007690 Solanum pennellii HOM05D007294 ORTHO05D009205 1.1e-10 71.6 101 39.6
Ciclev10002717m.g Citrus clementina HOM05D007294 ORTHO05D009205 1.4e-10 71.2 114 40.4
Manes.18G075800 Manihot esculenta HOM05D007294 ORTHO05D009205 1.4e-10 71.2 114 42.1
PGSC0003DMG400000918 Solanum tuberosum HOM05D007294 ORTHO05D009205 1.4e-10 71.2 101 39.6
AUR62004727 Chenopodium quinoa HOM05D007294 ORTHO05D009205 1.8e-10 70.9 69 46.4
Cc10_g10930 Coffea canephora HOM05D007294 ORTHO05D009205 1.8e-10 70.9 122 38.5
FAN15G3738 Fragaria x ananassa HOM05D007294 ORTHO05D009205 1.8e-10 70.9 82 40.2
Pp3c23_9240 Physcomitrium patens HOM05D007294 ORTHO05D009205 1.8e-10 70.9 138 36.2
vmacro12540 Vaccinium macrocarpon HOM05D007294 ORTHO05D009205 1.8e-10 70.9 85 44.7
AagrBONN_evm.TU.Sc2ySwM_368.1537 Anthoceros agrestis HOM05D007294 ORTHO05D009205 2.4e-10 70.5 126 38.1
C05p33890 Brassica napus HOM05D007294 ORTHO05D009205 2.4e-10 70.5 89 43.8
BolC5t32124H Brassica oleracea HOM05D007294 ORTHO05D009205 2.4e-10 70.5 89 43.8
ECA246G4672 Erigeron canadensis HOM05D007294 ORTHO05D009205 2.4e-10 70.5 118 34.7
Thhalv10029072m.g Eutrema salsugineum HOM05D007294 ORTHO05D009205 2.4e-10 70.5 101 42.6
CAN.G127.6 Capsicum annuum HOM05D007294 ORTHO05D009205 3.1e-10 70.1 88 39.8
TWI12G0925 Tripterygium wilfordii HOM05D007294 ORTHO05D009205 3.1e-10 70.1 88 40.9
Ah.13g072640 Amaranthus hybridus HOM05D001216 ORTHO05D008355 4.1e-10 69.7 79 41.8
Hma1.2p1_0186F.1_g081590 Hydrangea macrophylla HOM05D007294 ORTHO05D009205 4.1e-10 69.7 88 42.0
SalBow6G4857 Salvia bowleyana HOM05D007294 ORTHO05D009205 4.1e-10 69.7 81 40.7
GSVIVG01008891001 Vitis vinifera HOM05D007294 ORTHO05D009205 4.1e-10 69.7 120 38.3
Rhsim06G0104800 Rhododendron simsii HOM05D007294 ORTHO05D009205 5.3e-10 69.3 69 44.9
CDE08G0173 Ceratophyllum demersum HOM05D007294 ORTHO05D009205 1.2e-09 68.2 69 46.4
ClCG11G015660 Citrullus lanatus HOM05D007294 ORTHO05D009205 1.2e-09 68.2 110 40.0
Nitab4.5_0002798g0020 Nicotiana tabacum HOM05D007294 ORTHO05D009205 1.6e-09 67.8 77 39.0
VMungo1309G1993 Vigna mungo HOM05D007294 ORTHO05D009205 1.6e-09 67.8 104 38.5
CSS0038217 Camellia sinensis var. sinensis HOM05D007294 ORTHO05D009205 3.5e-09 66.6 107 38.3
QL09p035498 Quercus lobata HOM05D007294 ORTHO05D009205 4.5e-09 66.2 94 40.4
ATR0693G390 Amborella trichopoda HOM05D007294 ORTHO05D009205 5.9e-09 65.9 85 40.0
Nitab4.5_0001086g0040 Nicotiana tabacum HOM05D007294 ORTHO05D009205 7.7e-09 65.5 82 40.2
Cfa015999 Carpinus fangiana HOM05D000760 ORTHO05D009205 2.9e-08 63.5 65 47.7
BcaB05g23935 Brassica carinata HOM05D007294 ORTHO05D009205 3.8e-08 63.2 94 39.4
Mapoly0007s0151 Marchantia polymorpha HOM05D007294 ORTHO05D009205 3.2e-07 60.1 155 32.9
Cre07.g357300 Chlamydomonas reinhardtii HOM05D007294 ORTHO05D009205 1.2e-06 58.2 92 38.0


User provided reference genes

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