Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO13G563 Micromonas commoda HOM05D004481 ORTHO05D005350 2.1e-155 552.4 283 100.0
Mapoly0064s0080 Marchantia polymorpha HOM05D004481 ORTHO05D005350 9.9e-57 224.6 281 43.4
Pp3c10_18670 Physcomitrium patens HOM05D004481 ORTHO05D005350 2.2e-56 223.4 267 45.7
Lj5g0012751 Lotus japonicus HOM05D004481 ORTHO05D005350 8.7e-53 211.5 262 46.2
TAR628G0287 Trochodendron aralioides HOM05D004481 ORTHO05D005350 1.5e-52 210.7 266 42.9
SEGI_10030 Sequoiadendron giganteum HOM05D004481 ORTHO05D005350 2.5e-52 209.9 269 42.4
Sed0018810 Sechium edule HOM05D004481 ORTHO05D005350 3.3e-52 209.5 263 43.7
SGA_v2.0_scaffold225G42995 Striga asiatica HOM05D004481 ORTHO05D005350 3.3e-52 209.5 262 44.3
TAR376G0836 Trochodendron aralioides HOM05D004481 ORTHO05D005350 3.3e-52 209.5 262 43.9
Eucgr.I01088 Eucalyptus grandis HOM05D004481 ORTHO05D005350 4.3e-52 209.1 262 44.3
GSVIVG01037896001 Vitis vinifera HOM05D004481 ORTHO05D005350 5.6e-52 208.8 263 43.7
Glyma.20G130700 Glycine max HOM05D004481 ORTHO05D005350 1.2e-51 207.6 262 44.3
Glyma.10G260500 Glycine max HOM05D004481 ORTHO05D005350 1.6e-51 207.2 264 44.3
Potri.009G093200 Populus trichocarpa HOM05D004481 ORTHO05D005350 6.2e-51 205.3 263 43.3
TWI75G0922 Tripterygium wilfordii HOM05D004481 ORTHO05D005350 6.2e-51 205.3 263 43.3
VMungo0720G1503 Vigna mungo HOM05D004481 ORTHO05D005350 6.2e-51 205.3 262 43.9
Aqoxy5G01130 Aquilegia oxysepala HOM05D004481 ORTHO05D005350 1.1e-50 204.5 263 42.6
Nn1g04655 Nelumbo nucifera HOM05D004481 ORTHO05D005350 1.1e-50 204.5 264 45.5
Manes.07G066500 Manihot esculenta HOM05D004481 ORTHO05D005350 1.4e-50 204.1 260 43.5
Phvul.007G041700 Phaseolus vulgaris HOM05D004481 ORTHO05D005350 1.4e-50 204.1 262 43.9
TPR.G27083 Trifolium pratense HOM05D004481 ORTHO05D005350 1.4e-50 204.1 262 44.7
Atru.chr5.2445 Acer truncatum HOM05D004481 ORTHO05D005350 1.8e-50 203.8 263 42.2
arahy.Tifrunner.gnm1.ann1.5RC8JY Arachis hypogaea HOM05D004481 ORTHO05D005350 1.8e-50 203.8 262 44.7
CANSAT25G3441 Cannabis sativa HOM05D004481 ORTHO05D005350 1.8e-50 203.8 263 42.6
Os03g0760600 Oryza sativa ssp. japonica HOM05D004481 ORTHO05D005350 1.8e-50 203.8 276 42.8
Sabra09G0071800 Salix brachista HOM05D004481 ORTHO05D005350 1.8e-50 203.8 260 43.5
MSTRG.20195 Avicennia marina HOM05D004481 ORTHO05D005350 2.4e-50 203.4 262 42.7
TWI79G1728 Tripterygium wilfordii HOM05D004481 ORTHO05D005350 2.4e-50 203.4 260 43.8
Zm00001eb214380 Zea mays HOM05D004481 ORTHO05D005350 2.4e-50 203.4 266 44.0
CANSAT25G2190 Cannabis sativa HOM05D004481 ORTHO05D005350 3.1e-50 203.0 263 42.6
Oeu037260.1 Olea europaea HOM05D004481 ORTHO05D005350 3.1e-50 203.0 256 42.6
Cpa.g.sc106.118 Carica papaya HOM05D004481 ORTHO05D005350 4.0e-50 202.6 260 42.3
CiPaw.06G168400 Carya illinoinensis HOM05D004481 ORTHO05D005350 4.0e-50 202.6 262 43.9
PSO210G1902 Papaver somniferum HOM05D004481 ORTHO05D005350 4.0e-50 202.6 263 42.6
Hma1.2p1_1023F.1_g248990 Hydrangea macrophylla HOM05D004481 ORTHO05D005350 9.0e-50 201.4 259 43.6
SMO361G0327 Selaginella moellendorffii HOM05D004481 ORTHO05D005350 1.2e-49 201.1 257 42.4
Ca_11058_v3 Cicer arietinum L. HOM05D004481 ORTHO05D005350 2.6e-49 199.9 262 43.9
Ciclev10028970m.g Citrus clementina HOM05D004481 ORTHO05D005350 2.6e-49 199.9 260 42.3
Nn5g30459 Nelumbo nucifera HOM05D004481 ORTHO05D005350 2.6e-49 199.9 264 42.4
Duzib052G1089 Durio zibethinus HOM05D004481 ORTHO05D005350 3.4e-49 199.5 263 43.3
Lalb_Chr21g0308241 Lupinus albus HOM05D004481 ORTHO05D005350 3.4e-49 199.5 262 43.1
Actinidia27975 Actinidia chinensis HOM05D004481 ORTHO05D005350 4.4e-49 199.1 263 42.2
Psat6g216600 Pisum sativum HOM05D004481 ORTHO05D005350 4.4e-49 199.1 262 43.9
Cfa004607 Carpinus fangiana HOM05D004481 ORTHO05D005350 5.8e-49 198.7 249 45.8
Medtr1g107045 Medicago truncatula HOM05D004481 ORTHO05D005350 7.6e-49 198.4 262 43.5
Aa31LG2G16850 Aethionema arabicum HOM05D004481 ORTHO05D005350 1.3e-48 197.6 263 43.0
AagrBONN_evm.TU.Sc2ySwM_228.2403 Anthoceros agrestis HOM05D004481 ORTHO05D005350 1.3e-48 197.6 257 44.0
ECA234G2632 Erigeron canadensis HOM05D004481 ORTHO05D005350 1.3e-48 197.6 257 42.0
Potri.001G298500 Populus trichocarpa HOM05D004481 ORTHO05D005350 1.3e-48 197.6 263 42.2
unitig_0.g879 Utricularia gibba HOM05D004481 ORTHO05D005350 1.3e-48 197.6 270 41.9
PGR142G4205 Punica granatum HOM05D004481 ORTHO05D005350 1.7e-48 197.2 265 42.6
arahy.Tifrunner.gnm1.ann1.PGW4NS Arachis hypogaea HOM05D004481 ORTHO05D005350 2.2e-48 196.8 248 45.6
CSS0002878 Camellia sinensis var. sinensis HOM05D004481 ORTHO05D005350 2.2e-48 196.8 263 41.8
CSS0015264 Camellia sinensis var. sinensis HOM05D004481 ORTHO05D005350 2.2e-48 196.8 263 41.8
Migut.B00402 Erythranthe guttata HOM05D004481 ORTHO05D005350 3.8e-48 196.1 258 42.2
Gohir.A12G021100 Gossypium hirsutum HOM05D004481 ORTHO05D005350 3.8e-48 196.1 265 41.9
PSO170G4403 Papaver somniferum HOM05D004481 ORTHO05D005350 3.8e-48 196.1 262 42.0
Rhsim11G0156300 Rhododendron simsii HOM05D004481 ORTHO05D005350 3.8e-48 196.1 263 42.2
RcHm_v2.0_Chr6g0254491 Rosa chinensis HOM05D004481 ORTHO05D005350 6.4e-48 195.3 263 42.6
SalBow6G4388 Salvia bowleyana HOM05D004481 ORTHO05D005350 6.4e-48 195.3 290 39.0
SalBow6G4779 Salvia bowleyana HOM05D004481 ORTHO05D005350 6.4e-48 195.3 290 39.0
CAN.G606.21 Capsicum annuum HOM05D004481 ORTHO05D005350 8.4e-48 194.9 262 42.7
Sed0023236 Sechium edule HOM05D004481 ORTHO05D005350 8.4e-48 194.9 273 41.8
Thecc.02G111500 Theobroma cacao HOM05D004481 ORTHO05D005350 8.4e-48 194.9 263 42.6
SHI05271 Sapria himalayana HOM05D004481 ORTHO05D005350 1.1e-47 194.5 249 42.6
ATR0661G316 Amborella trichopoda HOM05D004481 ORTHO05D005350 1.4e-47 194.1 241 44.0
Carub.0007s0609 Capsella rubella HOM05D004481 ORTHO05D005350 1.4e-47 194.1 263 42.6
MELO3C018500.2 Cucumis melo HOM05D004481 ORTHO05D005350 1.4e-47 194.1 262 43.1
Nitab4.5_0001480g0100 Nicotiana tabacum HOM05D004481 ORTHO05D005350 1.4e-47 194.1 262 42.4
CSS0013759 Camellia sinensis var. sinensis HOM05D004481 ORTHO05D005350 1.9e-47 193.7 260 42.3
HanXRQChr04g0105981 Helianthus annuus HOM05D004481 ORTHO05D005350 1.9e-47 193.7 259 42.5
PGSC0003DMG400025761 Solanum tuberosum HOM05D004481 ORTHO05D005350 2.4e-47 193.4 262 42.7
AL7G17000 Arabidopsis lyrata HOM05D004481 ORTHO05D005350 3.2e-47 193.0 263 42.2
BolC1t00437H Brassica oleracea HOM05D004481 ORTHO05D005350 3.2e-47 193.0 263 43.0
Gohir.D12G021400 Gossypium hirsutum HOM05D004481 ORTHO05D005350 3.2e-47 193.0 265 41.5
Gorai.008G021700 Gossypium raimondii HOM05D004481 ORTHO05D005350 3.2e-47 193.0 265 41.5
Lalb_Chr02g0145211 Lupinus albus HOM05D004481 ORTHO05D005350 3.2e-47 193.0 262 41.6
MD10G1100100 Malus domestica HOM05D004481 ORTHO05D005350 3.2e-47 193.0 263 41.4
Sp7g32060 Schrenkiella parvula HOM05D004481 ORTHO05D005350 4.2e-47 192.6 263 42.6
CDE02G3699 Ceratophyllum demersum HOM05D004481 ORTHO05D005350 5.4e-47 192.2 272 40.1
Thhalv10025895m.g Eutrema salsugineum HOM05D004481 ORTHO05D005350 5.4e-47 192.2 264 42.8
FvH4_2g04780 Fragaria vesca HOM05D004481 ORTHO05D005350 5.4e-47 192.2 263 41.8
FAN24G0473 Fragaria x ananassa HOM05D004481 ORTHO05D005350 5.4e-47 192.2 263 41.8
QL11p032653 Quercus lobata HOM05D004481 ORTHO05D005350 5.4e-47 192.2 249 43.4
AT4G34270 Arabidopsis thaliana HOM05D004481 ORTHO05D005350 7.1e-47 191.8 263 42.2
CARHR242510 Cardamine hirsuta HOM05D004481 ORTHO05D005350 7.1e-47 191.8 259 42.5
THA.LOC104819549 Tarenaya hassleriana HOM05D004481 ORTHO05D005350 7.1e-47 191.8 270 42.2
CsaV3_7G008050 Cucumis sativus L. HOM05D004481 ORTHO05D005350 9.3e-47 191.4 263 43.0
Prupe.8G137600 Prunus persica HOM05D004481 ORTHO05D005350 9.3e-47 191.4 263 41.4
C01p04510 Brassica napus HOM05D004481 ORTHO05D005350 2.1e-46 190.3 263 42.6
THA.LOC104807234 Tarenaya hassleriana HOM05D004481 ORTHO05D005350 2.1e-46 190.3 264 42.0
FAN27G3202 Fragaria x ananassa HOM05D004481 ORTHO05D005350 2.7e-46 189.9 263 41.8
ClCG02G006560 Citrullus lanatus HOM05D004481 ORTHO05D005350 4.6e-46 189.1 273 42.1
Cc02_g19430 Coffea canephora HOM05D004481 ORTHO05D005350 4.6e-46 189.1 261 41.4
BcaNung04989 Brassica carinata HOM05D004481 ORTHO05D005350 6.0e-46 188.7 263 42.6
AUR62010332 Chenopodium quinoa HOM05D004481 ORTHO05D005350 6.0e-46 188.7 262 42.4
DCAR_021976 Daucus carota HOM05D004481 ORTHO05D005350 1.0e-45 188.0 248 44.0
Sc18g0005550 Simmondsia chinensis HOM05D004481 ORTHO05D005350 1.0e-45 188.0 259 42.5
A01p04140 Brassica napus HOM05D004481 ORTHO05D005350 1.3e-45 187.6 263 42.2
Nitab4.5_0002647g0020 Nicotiana tabacum HOM05D004481 ORTHO05D005350 1.3e-45 187.6 262 42.0
Nitab4.5_0003699g0050 Nicotiana tabacum HOM05D004481 ORTHO05D005350 3.9e-45 186.0 273 40.7
Solyc10g049850.3 Solanum lycopersicum HOM05D004481 ORTHO05D005350 5.1e-45 185.7 262 41.6
Dinv42206 Davidia involucrata HOM05D002228 ORTHO05D005350 1.1e-44 184.5 235 43.8
BraA01t00403Z Brassica rapa HOM05D004481 ORTHO05D005350 9.6e-44 181.4 236 44.1
Lsat_1_v5_gn_5_116421 Lactuca sativa HOM05D004481 ORTHO05D005350 9.6e-44 181.4 254 41.3
CSS0003948 Camellia sinensis var. sinensis HOM05D004481 ORTHO05D005350 2.8e-43 179.9 260 40.8
Lj5A215G63 Lonicera japonica HOM05D004481 ORTHO05D005350 4.8e-43 179.1 300 37.0
vmacro01990 Vaccinium macrocarpon HOM05D004481 ORTHO05D005350 8.1e-43 178.3 227 44.1
CiPaw.05G013400 Carya illinoinensis HOM05D004481 ORTHO05D005350 1.1e-42 177.9 224 43.8
PGSC0003DMG400023263 Solanum tuberosum HOM05D004481 ORTHO05D005350 2.4e-42 176.8 248 41.9
Hma1.2p1_1023F.1_g249000 Hydrangea macrophylla HOM05D004481 ORTHO05D005350 5.3e-42 175.6 222 44.6
PRCOL_00000955 Prasinoderma coloniale HOM05D004481 ORTHO05D005350 9.0e-42 174.9 271 41.3
Peaxi162Scf00016g02527 Petunia axillaris HOM05D004481 ORTHO05D005350 2.6e-41 173.3 300 36.7
Hund06305 Selenicereus undatus HOM05D004481 ORTHO05D005350 2.1e-38 163.7 259 40.2
FAN15G0583 Fragaria x ananassa HOM05D004481 ORTHO05D005350 4.6e-38 162.5 259 38.6
Cre17.g734150 Chlamydomonas reinhardtii HOM05D004481 ORTHO05D005350 1.3e-35 154.5 384 30.5
EL10Ac9g22252 Beta vulgaris HOM05D004481 ORTHO05D005350 1.6e-35 154.1 262 38.5
Rhsim11G0157800 Rhododendron simsii HOM05D004481 ORTHO05D005350 8.1e-35 151.8 263 37.6
Ah.01g010900 Amaranthus hybridus HOM05D004481 ORTHO05D005350 1.1e-34 151.4 202 41.6
Haze_10202 Corylus avellana HOM05D004481 ORTHO05D005350 3.1e-34 149.8 260 36.9
HPP92_010143 Vanilla planifolia HOM05D004481 ORTHO05D005350 2.7e-30 136.7 178 41.0
Actinidia00401 Actinidia chinensis HOM05D004481 ORTHO05D005350 7.4e-28 128.6 202 39.1
Sopen10g019880 Solanum pennellii HOM05D004481 ORTHO05D005350 2.8e-27 126.7 160 43.8
Cfa024874 Carpinus fangiana HOM05D004481 ORTHO05D005350 1.2e-25 121.3 261 31.4
FAN20G2321 Fragaria x ananassa HOM05D004481 ORTHO05D005350 1.7e-24 117.5 263 33.8
AUR62039053 Chenopodium quinoa HOM05D004481 ORTHO05D005350 2.2e-24 117.1 234 35.9
CBR_g36716 Chara braunii HOM05D004481 ORTHO05D005350 4.8e-19 99.4 74 56.8
BcaNung04162 Brassica carinata HOM05D004481 ORTHO05D005350 1.2e-14 84.7 140 40.0
BolC3t17849H Brassica oleracea HOM05D004481 ORTHO05D005350 4.6e-14 82.8 157 36.3
MD00G1108700 Malus domestica HOM05D004481 ORTHO05D005350 7.9e-14 82.0 122 41.0
PRCOL_00004768 Prasinoderma coloniale HOM05D004481 ORTHO05D005350 2.3e-13 80.5 198 30.8
C03p55700 Brassica napus HOM05D004481 ORTHO05D005350 1.7e-11 74.3 157 34.4
CSS0037652 Camellia sinensis var. sinensis HOM05D004481 ORTHO05D005350 2.2e-11 73.9 146 34.2
Actinidia34390 Actinidia chinensis HOM05D004481 ORTHO05D005350 8.2e-11 72.0 64 53.1
BcaC08g44162 Brassica carinata HOM05D004481 ORTHO05D005350 5.3e-10 69.3 146 34.2
Sopen01g049660 Solanum pennellii HOM05D004481 ORTHO05D005350 3.2e-07 60.1 62 48.4
Sopen01g049670 Solanum pennellii HOM05D004481 ORTHO05D005350 3.2e-07 60.1 70 45.7
BcaNung04988 Brassica carinata HOM05D004481 ORTHO05D005350 9.4e-07 58.5 78 44.9


User provided reference genes

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