Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO13G519 Micromonas commoda HOM05D007440 ORTHO05D009418 2.1e-274 948.3 469 100.0
Gorai.009G265700 Gossypium raimondii HOM05D007440 ORTHO05D009418 1.8e-55 221.1 429 34.3
Gohir.D05G254100 Gossypium hirsutum HOM05D007440 ORTHO05D009418 3.1e-55 220.3 429 34.3
Gohir.A05G252301 Gossypium hirsutum HOM05D007440 ORTHO05D009418 9.9e-54 215.3 429 33.1
PRCOL_00006364 Prasinoderma coloniale HOM05D007440 ORTHO05D009418 3.8e-53 213.4 442 33.9
Thecc.08G172800 Theobroma cacao HOM05D007440 ORTHO05D009418 5.4e-52 209.5 413 32.9
Solyc12g017690.3 Solanum lycopersicum HOM05D007440 ORTHO05D009418 2.1e-51 207.6 413 31.7
Sopen12g008470 Solanum pennellii HOM05D007440 ORTHO05D009418 2.7e-51 207.2 413 32.0
Dinv41796 Davidia involucrata HOM05D007440 ORTHO05D009418 3.5e-51 206.8 416 32.0
CBR_g29696 Chara braunii HOM05D007440 ORTHO05D009418 1.0e-50 205.3 460 32.2
Lj9C701T14 Lonicera japonica HOM05D007440 ORTHO05D009418 2.3e-50 204.1 410 32.9
Potri.019G076200 Populus trichocarpa HOM05D007440 ORTHO05D009418 1.1e-49 201.8 417 32.4
Atru.chr12.1704 Acer truncatum HOM05D007440 ORTHO05D009418 1.9e-49 201.1 416 31.5
Lj3g0019924 Lotus japonicus HOM05D007440 ORTHO05D009418 1.9e-49 201.1 412 32.5
TPR.G34135 Trifolium pratense HOM05D007440 ORTHO05D009418 2.5e-49 200.7 430 31.9
FAN18G0056 Fragaria x ananassa HOM05D007440 ORTHO05D009418 5.6e-49 199.5 413 32.0
Migut.N03008 Erythranthe guttata HOM05D007440 ORTHO05D009418 7.4e-49 199.1 414 31.9
Psat7g227720 Pisum sativum HOM05D007440 ORTHO05D009418 7.4e-49 199.1 414 31.9
SalBow6G1672 Salvia bowleyana HOM05D007440 ORTHO05D009418 7.4e-49 199.1 432 32.4
Hma1.2p1_0708F.1_g207100 Hydrangea macrophylla HOM05D007440 ORTHO05D009418 9.6e-49 198.7 413 32.0
QL09p004054 Quercus lobata HOM05D007440 ORTHO05D009418 1.3e-48 198.4 434 30.9
CSS0017361 Camellia sinensis var. sinensis HOM05D007440 ORTHO05D009418 2.8e-48 197.2 412 30.6
arahy.Tifrunner.gnm1.ann1.E07HZ8 Arachis hypogaea HOM05D007440 ORTHO05D009418 3.7e-48 196.8 428 30.8
RcHm_v2.0_Chr7g0224381 Rosa chinensis HOM05D007440 ORTHO05D009418 3.7e-48 196.8 413 31.2
TAR381G0685 Trochodendron aralioides HOM05D007440 ORTHO05D009418 3.7e-48 196.8 419 31.5
arahy.Tifrunner.gnm1.ann1.YQ4984 Arachis hypogaea HOM05D007440 ORTHO05D009418 4.8e-48 196.4 428 30.8
Glyma.13G000800 Glycine max HOM05D007440 ORTHO05D009418 4.8e-48 196.4 431 31.6
CiPaw.03G017000 Carya illinoinensis HOM05D007440 ORTHO05D009418 6.2e-48 196.1 413 31.0
Mapoly0046s0064 Marchantia polymorpha HOM05D007440 ORTHO05D009418 1.1e-47 195.3 429 31.0
CsaV3_2G033090 Cucumis sativus L. HOM05D007440 ORTHO05D009418 1.4e-47 194.9 415 32.3
Oeu061891.1 Olea europaea HOM05D007440 ORTHO05D009418 1.8e-47 194.5 414 31.2
Actinidia29398 Actinidia chinensis HOM05D007440 ORTHO05D009418 5.3e-47 193.0 414 31.4
Cfa008111 Carpinus fangiana HOM05D007440 ORTHO05D009418 5.3e-47 193.0 413 30.8
HanXRQChr02g0037061 Helianthus annuus HOM05D007440 ORTHO05D009418 6.9e-47 192.6 427 30.4
Medtr4g031180 Medicago truncatula HOM05D007440 ORTHO05D009418 6.9e-47 192.6 429 31.0
Rhsim02G0174300 Rhododendron simsii HOM05D007440 ORTHO05D009418 6.9e-47 192.6 415 30.4
TWI23G1187 Tripterygium wilfordii HOM05D007440 ORTHO05D009418 6.9e-47 192.6 412 31.6
Sed0012539 Sechium edule HOM05D007440 ORTHO05D009418 1.2e-46 191.8 413 32.2
Cc03_g16220 Coffea canephora HOM05D007440 ORTHO05D009418 2.6e-46 190.7 414 30.0
GSVIVG01036437001 Vitis vinifera HOM05D007440 ORTHO05D009418 2.6e-46 190.7 413 30.8
Cpa.g.sc21.56 Carica papaya HOM05D007440 ORTHO05D009418 4.5e-46 189.9 411 30.7
Cre10.g451000 Chlamydomonas reinhardtii HOM05D007440 ORTHO05D009418 4.5e-46 189.9 490 31.8
MD15G1399400 Malus domestica HOM05D007440 ORTHO05D009418 4.5e-46 189.9 415 31.8
CANSAT25G0816 Cannabis sativa HOM05D007440 ORTHO05D009418 5.8e-46 189.5 428 31.3
MELO3C008079.2 Cucumis melo HOM05D007440 ORTHO05D009418 5.8e-46 189.5 413 31.5
Manes.18G121350 Manihot esculenta HOM05D007440 ORTHO05D009418 5.8e-46 189.5 420 32.1
PSO170G3813 Papaver somniferum HOM05D007440 ORTHO05D009418 5.8e-46 189.5 413 29.8
Pp3c17_10270 Physcomitrium patens HOM05D007440 ORTHO05D009418 7.6e-46 189.1 428 31.5
Hund26630 Selenicereus undatus HOM05D007440 ORTHO05D009418 1.0e-45 188.7 437 31.8
Aa31LG4G9050 Aethionema arabicum HOM05D007440 ORTHO05D009418 1.3e-45 188.3 427 31.1
ClCG11G008830 Citrullus lanatus HOM05D007440 ORTHO05D009418 1.3e-45 188.3 413 31.7
HPP92_004660 Vanilla planifolia HOM05D007440 ORTHO05D009418 1.3e-45 188.3 413 31.2
SMO347G0497 Selaginella moellendorffii HOM05D007440 ORTHO05D009418 2.9e-45 187.2 409 31.8
Lsat_1_v5_gn_1_25281 Lactuca sativa HOM05D007440 ORTHO05D009418 3.8e-45 186.8 435 31.0
Sabra19G0086600 Salix brachista HOM05D007440 ORTHO05D009418 3.8e-45 186.8 427 31.1
Nn1g02997 Nelumbo nucifera HOM05D007440 ORTHO05D009418 2.5e-44 184.1 413 30.5
Phvul.011G216600 Phaseolus vulgaris HOM05D007440 ORTHO05D009418 3.2e-44 183.7 413 31.2
Aqoxy6G00075 Aquilegia oxysepala HOM05D007440 ORTHO05D009418 4.2e-44 183.3 413 31.2
Os10g0141900 Oryza sativa ssp. japonica HOM05D007440 ORTHO05D009418 5.5e-44 183.0 410 30.2
PGR031G3126 Punica granatum HOM05D007440 ORTHO05D009418 5.5e-44 183.0 416 31.2
Lalb_Chr17g0336871 Lupinus albus HOM05D007440 ORTHO05D009418 2.7e-43 180.6 427 29.7
CDE05G2917 Ceratophyllum demersum HOM05D007440 ORTHO05D009418 6.0e-43 179.5 419 30.8
ATR1089G110 Amborella trichopoda HOM05D007440 ORTHO05D009418 1.3e-42 178.3 435 30.8
FvH4_5g32910 Fragaria vesca HOM05D007440 ORTHO05D009418 1.8e-42 177.9 394 30.7
THA.LOC104810378 Tarenaya hassleriana HOM05D007440 ORTHO05D009418 1.8e-42 177.9 413 31.7
RcHm_v2.0_Chr7g0230881 Rosa chinensis HOM05D007440 ORTHO05D009418 2.5e-41 174.1 358 31.3
Prupe.1G546900 Prunus persica HOM05D007440 ORTHO05D009418 7.4e-41 172.6 393 31.0
Ca_12759_v3 Cicer arietinum L. HOM05D007440 ORTHO05D009418 9.6e-41 172.2 428 30.1
Eucgr.H00023 Eucalyptus grandis HOM05D007440 ORTHO05D009418 9.6e-41 172.2 316 34.2
Haze_13927 Corylus avellana HOM05D007440 ORTHO05D009418 8.2e-40 169.1 413 29.3
Ciclev10024582m.g Citrus clementina HOM05D007440 ORTHO05D009418 1.5e-38 164.9 414 29.5
SGA_v2.0_scaffold19G08914 Striga asiatica HOM05D007440 ORTHO05D009418 1.7e-37 161.4 509 27.3
ECA247G2087 Erigeron canadensis HOM05D007440 ORTHO05D009418 3.8e-37 160.2 360 30.8
FAN04G2515 Fragaria x ananassa HOM05D007440 ORTHO05D009418 2.5e-36 157.5 414 30.0
AagrBONN_evm.TU.Sc2ySwM_362.1381 Anthoceros agrestis HOM05D007440 ORTHO05D009418 1.2e-35 155.2 311 31.2
Pp3c9_24070 Physcomitrium patens HOM05D007440 ORTHO05D009418 7.9e-35 152.5 411 29.2
Nitab4.5_0000219g0060 Nicotiana tabacum HOM05D007440 ORTHO05D009418 9.7e-33 145.6 247 33.6
FAN08G1847 Fragaria x ananassa HOM05D007440 ORTHO05D009418 8.2e-32 142.5 388 29.4
Zm00001eb026400 Zea mays HOM05D007440 ORTHO05D009418 2.2e-29 134.4 316 30.1
DCAR_002184 Daucus carota HOM05D007440 ORTHO05D004363 9.4e-28 129.0 372 27.4
Nitab4.5_0006566g0010 Nicotiana tabacum HOM05D007440 ORTHO05D009418 5.1e-26 123.2 249 32.9
PGSC0003DMG402002240 Solanum tuberosum HOM05D007440 ORTHO05D009418 9.7e-25 119.0 202 32.7
MBI03_g14514_MAGBIO Magnolia biondii HOM05D007440 ORTHO05D009418 1.1e-23 115.5 316 28.2
Peaxi162Scf00017g00002 Petunia axillaris HOM05D007440 ORTHO05D009418 1.2e-22 112.1 178 38.8
Duzib177G0102 Durio zibethinus HOM05D007440 ORTHO05D009418 3.6e-19 100.5 220 31.4
CSS0018984 Camellia sinensis var. sinensis HOM05D007440 ORTHO05D009418 1.5e-17 95.1 203 28.6
Lsat_1_v5_gn_7_9441 Lactuca sativa HOM05D007440 ORTHO05D009418 1.3e-16 92.0 305 27.9
vmacro11038 Vaccinium macrocarpon HOM05D007440 ORTHO05D009418 2.2e-16 91.3 250 28.0
Eucgr.F00379 Eucalyptus grandis HOM05D006997 ORTHO05D008713 1.2e-14 85.5 414 24.6
CAN.G8.41 Capsicum annuum HOM05D007440 ORTHO05D009418 1.6e-14 85.1 262 27.1
MD08G1188600 Malus domestica HOM05D006997 ORTHO05D008713 3.5e-14 84.0 414 24.2
Prupe.1G523100 Prunus persica HOM05D006997 ORTHO05D008713 1.3e-13 82.0 414 24.2
SalBow1G8133 Salvia bowleyana HOM05D006997 ORTHO05D008713 2.9e-13 80.9 418 24.2
Migut.O00787 Erythranthe guttata HOM05D006997 ORTHO05D008713 1.9e-12 78.2 321 25.2
CsaV3_3G047700 Cucumis sativus L. HOM05D006997 ORTHO05D008713 3.2e-12 77.4 321 25.5
Cc10_g06680 Coffea canephora HOM05D006997 ORTHO05D008713 4.2e-12 77.0 321 25.9
CANSAT54G2489 Cannabis sativa HOM05D006997 ORTHO05D008713 5.5e-12 76.6 321 25.2
MELO3C003553.2 Cucumis melo HOM05D006997 ORTHO05D008713 7.2e-12 76.3 321 25.5
THA.LOC104806793 Tarenaya hassleriana HOM05D006997 ORTHO05D008713 7.2e-12 76.3 324 24.4
SEGI_15929 Sequoiadendron giganteum HOM05D007440 ORTHO05D009418 1.6e-11 75.1 74 47.3
CAN.G857.15 Capsicum annuum HOM05D006997 ORTHO05D008713 2.1e-11 74.7 321 25.5
Nn5g29994 Nelumbo nucifera HOM05D006997 ORTHO05D008713 2.1e-11 74.7 321 25.5
HanXRQChr02g0039281 Helianthus annuus HOM05D006997 ORTHO05D008713 2.7e-11 74.3 414 23.7
PGSC0003DMG400030838 Solanum tuberosum HOM05D006997 ORTHO05D008713 2.7e-11 74.3 321 25.5
Pp3c2_7910 Physcomitrium patens HOM05D006997 ORTHO05D008713 3.6e-11 73.9 269 27.5
Lsat_1_v5_gn_1_3100 Lactuca sativa HOM05D006997 ORTHO05D008713 4.7e-11 73.6 321 24.9
Sed0013982 Sechium edule HOM05D006997 ORTHO05D008713 4.7e-11 73.6 328 24.7
Sopen04g029680 Solanum pennellii HOM05D006997 ORTHO05D008713 4.7e-11 73.6 321 25.9
TPR.G18644 Trifolium pratense HOM05D006997 ORTHO05D008713 6.1e-11 73.2 176 31.2
Lj4C96G9 Lonicera japonica HOM05D006997 ORTHO05D008713 8.0e-11 72.8 305 25.6
Migut.N02878 Erythranthe guttata HOM05D006997 ORTHO05D008713 1.0e-10 72.4 304 25.0
Solyc04g074710.3 Solanum lycopersicum HOM05D006997 ORTHO05D008713 1.0e-10 72.4 321 25.9
TWI56G0051 Tripterygium wilfordii HOM05D006997 ORTHO05D008713 1.0e-10 72.4 321 25.2
Cre12.g558400 Chlamydomonas reinhardtii HOM05D006997 ORTHO05D008713 1.4e-10 72.0 178 29.2
Ca_20316_v3 Cicer arietinum L. HOM05D006997 ORTHO05D008713 1.4e-10 72.0 176 31.2
Rhsim06G0078000 Rhododendron simsii HOM05D006997 ORTHO05D008713 1.4e-10 72.0 274 27.4
Lj1g0014637 Lotus japonicus HOM05D006997 ORTHO05D008713 2.3e-10 71.2 176 31.2
Peaxi162Scf00030g02415 Petunia axillaris HOM05D006997 ORTHO05D008713 2.3e-10 71.2 321 25.2
CSS0033006 Camellia sinensis var. sinensis HOM05D006997 ORTHO05D008713 3.0e-10 70.9 176 30.7
CSS0036565 Camellia sinensis var. sinensis HOM05D006997 ORTHO05D008713 3.0e-10 70.9 176 30.7
Hund26989 Selenicereus undatus HOM05D006997 ORTHO05D008713 3.0e-10 70.9 152 32.2
SGA_v2.0_scaffold28G11904 Striga asiatica HOM05D006997 ORTHO05D008713 3.0e-10 70.9 250 26.0
Medtr5g099370 Medicago truncatula HOM05D006997 ORTHO05D008713 4.0e-10 70.5 164 31.1
PRCOL_00000168 Prasinoderma coloniale HOM05D006997 ORTHO05D008713 4.0e-10 70.5 321 23.7
AagrBONN_evm.TU.Sc2ySwM_228.3329 Anthoceros agrestis HOM05D006997 ORTHO05D008713 5.2e-10 70.1 176 30.7
CSS0010463 Camellia sinensis var. sinensis HOM05D007440 ORTHO05D009418 5.2e-10 70.1 151 29.1
Mapoly0028s0040 Marchantia polymorpha HOM05D006997 ORTHO05D008713 8.8e-10 69.3 176 30.7
Nitab4.5_0000786g0050 Nicotiana tabacum HOM05D006997 ORTHO05D008713 8.8e-10 69.3 307 25.1
Atru.chr13.1117 Acer truncatum HOM05D006997 ORTHO05D008713 1.1e-09 68.9 269 26.0
Ciclev10001423m.g Citrus clementina HOM05D006997 ORTHO05D008713 1.1e-09 68.9 269 26.8
Hma1.2p1_1613F.1_g293656 Hydrangea macrophylla HOM05D006997 ORTHO05D008713 1.1e-09 68.9 176 30.7
Actinidia10345 Actinidia chinensis HOM05D006997 ORTHO05D008713 1.5e-09 68.6 176 30.1
Haze_18264 Corylus avellana HOM05D006997 ORTHO05D008713 1.5e-09 68.6 176 30.7
Gorai.002G141200 Gossypium raimondii HOM05D006997 ORTHO05D008713 1.5e-09 68.6 269 26.8
Nitab4.5_0005108g0030 Nicotiana tabacum HOM05D006997 ORTHO05D008713 1.5e-09 68.6 326 25.2
Psat2g000280 Pisum sativum HOM05D006997 ORTHO05D008713 1.5e-09 68.6 176 30.7
Potri.002G100700 Populus trichocarpa HOM05D006997 ORTHO05D008713 1.5e-09 68.6 176 31.2
vmacro21291 Vaccinium macrocarpon HOM05D006997 ORTHO05D008713 1.5e-09 68.6 176 31.2
HPP92_005985 Vanilla planifolia HOM05D006997 ORTHO05D008713 1.5e-09 68.6 164 31.1
VMungo1309G1562 Vigna mungo HOM05D006997 ORTHO05D008713 1.5e-09 68.6 176 31.2
Actinidia30795 Actinidia chinensis HOM05D006997 ORTHO05D008713 2.0e-09 68.2 176 30.1
RcHm_v2.0_Chr3g0492071 Rosa chinensis HOM05D006997 ORTHO05D008713 2.0e-09 68.2 176 29.5
Thecc.08G101800 Theobroma cacao HOM05D006997 ORTHO05D008713 2.0e-09 68.2 269 26.4
arahy.Tifrunner.gnm1.ann1.2V06JV Arachis hypogaea HOM05D006997 ORTHO05D008713 2.6e-09 67.8 176 30.1
arahy.Tifrunner.gnm1.ann1.50RG73 Arachis hypogaea HOM05D006997 ORTHO05D008713 2.6e-09 67.8 176 30.1
COL.COLO4_12006 Corchorus olitorius HOM05D006997 ORTHO05D008713 2.6e-09 67.8 129 32.6
FvH4_5g36560 Fragaria vesca HOM05D006997 ORTHO05D008713 2.6e-09 67.8 176 30.1
FAN08G2563 Fragaria x ananassa HOM05D006997 ORTHO05D008713 2.6e-09 67.8 176 30.1
FAN13G2131 Fragaria x ananassa HOM05D006997 ORTHO05D008713 2.6e-09 67.8 176 30.1
FAN18G0565 Fragaria x ananassa HOM05D006997 ORTHO05D008713 2.6e-09 67.8 176 30.1
Gohir.A01G132700 Gossypium hirsutum HOM05D006997 ORTHO05D008713 2.6e-09 67.8 269 26.4
TAR381G0945 Trochodendron aralioides HOM05D006997 ORTHO05D008713 2.6e-09 67.8 176 30.1
ECA247G1028 Erigeron canadensis HOM05D006997 ORTHO05D008713 3.3e-09 67.4 176 30.1
Glyma.04G099000 Glycine max HOM05D006997 ORTHO05D008713 3.3e-09 67.4 176 30.7
Glyma.06G100700 Glycine max HOM05D006997 ORTHO05D008713 3.3e-09 67.4 176 30.7
MBI02_g10710_MAGBIO Magnolia biondii HOM05D006997 ORTHO05D008713 3.3e-09 67.4 176 29.5
Manes.02G149000 Manihot esculenta HOM05D006997 ORTHO05D008713 3.3e-09 67.4 176 30.1
PGR042G3947 Punica granatum HOM05D006997 ORTHO05D008713 3.3e-09 67.4 176 30.1
GSVIVG01009084001 Vitis vinifera HOM05D006997 ORTHO05D008713 3.3e-09 67.4 176 30.1
Duzib093G0368 Durio zibethinus HOM05D006997 ORTHO05D008713 4.4e-09 67.0 176 30.7
Lalb_Chr08g0242211 Lupinus albus HOM05D006997 ORTHO05D008713 4.4e-09 67.0 176 30.7
Aqoxy5G01920 Aquilegia oxysepala HOM05D006997 ORTHO05D008713 5.7e-09 66.6 176 30.1
COL.COLO4_24615 Corchorus olitorius HOM05D007440 ORTHO05D009418 5.7e-09 66.6 152 30.9
Glyma.08G367700 Glycine max HOM05D007440 ORTHO05D009418 5.7e-09 66.6 76 42.1
ATR0684G208 Amborella trichopoda HOM05D006997 ORTHO05D008713 7.5e-09 66.2 176 29.5
Cpa.g.sc36.182 Carica papaya HOM05D006997 ORTHO05D008713 7.5e-09 66.2 176 30.1
CiPaw.15G045900 Carya illinoinensis HOM05D006997 ORTHO05D008713 7.5e-09 66.2 176 29.5
Duzib116G0677 Durio zibethinus HOM05D006997 ORTHO05D008713 7.5e-09 66.2 176 30.1
Phvul.009G033100 Phaseolus vulgaris HOM05D006997 ORTHO05D008713 7.5e-09 66.2 176 30.7
QL02p002364 Quercus lobata HOM05D006997 ORTHO05D008713 7.5e-09 66.2 176 29.5
Gohir.D01G115600 Gossypium hirsutum HOM05D006997 ORTHO05D008713 9.7e-09 65.9 129 32.6
vmacro11039 Vaccinium macrocarpon HOM05D007440 ORTHO05D009418 9.7e-09 65.9 202 24.3
DCAR_012882 Daucus carota HOM05D006997 ORTHO05D008713 1.7e-08 65.1 234 26.1
PSO447G0258 Papaver somniferum HOM05D006997 ORTHO05D008713 1.7e-08 65.1 176 29.5
PSO700G0253 Papaver somniferum HOM05D006997 ORTHO05D008713 1.7e-08 65.1 176 29.5
SMO203G0247 Selaginella moellendorffii HOM05D006997 ORTHO05D008713 1.7e-08 65.1 275 26.5
PSO170G4713 Papaver somniferum HOM05D006997 ORTHO05D008713 3.7e-08 63.9 176 29.0
arahy.Tifrunner.gnm1.ann1.L1DSY1 Arachis hypogaea HOM05D006997 ORTHO05D008713 1.1e-07 62.4 129 31.0
Dinv07073 Davidia involucrata HOM05D006997 ORTHO05D008713 1.1e-07 62.4 151 31.8
ClCG11G014320 Citrullus lanatus HOM05D006997 ORTHO05D008713 1.6e-06 58.5 321 23.7


User provided reference genes

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