Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO13G493 Micromonas commoda HOM05D007008 ORTHO05D008622 2.3e-81 305.4 151 100.0
Nn2g14020 Nelumbo nucifera HOM05D007008 ORTHO05D008622 7.7e-32 141.0 99 58.6
Solyc08g006700.3 Solanum lycopersicum HOM05D007008 ORTHO05D008622 1.0e-31 140.6 101 56.4
PGSC0003DMG400026283 Solanum tuberosum HOM05D007008 ORTHO05D008622 1.0e-31 140.6 101 56.4
EL10Ac2g02486 Beta vulgaris HOM05D007008 ORTHO05D008622 1.3e-31 140.2 100 60.0
CAN.G906.10 Capsicum annuum HOM05D007008 ORTHO05D008622 1.3e-31 140.2 101 57.4
Rhsim02G0211800 Rhododendron simsii HOM05D007008 ORTHO05D008622 2.9e-31 139.0 99 58.6
Nn8g40044 Nelumbo nucifera HOM05D007008 ORTHO05D008622 3.8e-31 138.7 99 57.6
QL02p018585 Quercus lobata HOM05D007008 ORTHO05D008622 5.0e-31 138.3 99 57.6
CiPaw.08G005100 Carya illinoinensis HOM05D007008 ORTHO05D008622 6.5e-31 137.9 99 57.6
CDE05G1515 Ceratophyllum demersum HOM05D007008 ORTHO05D008622 6.5e-31 137.9 99 57.6
Eucgr.C04041 Eucalyptus grandis HOM05D007008 ORTHO05D008622 6.5e-31 137.9 99 59.6
Manes.03G007600 Manihot esculenta HOM05D007008 ORTHO05D008622 6.5e-31 137.9 99 56.6
AagrBONN_evm.TU.Sc2ySwM_344.3123 Anthoceros agrestis HOM05D007008 ORTHO05D008622 8.5e-31 137.5 101 59.4
Mapoly0112s0015 Marchantia polymorpha HOM05D007008 ORTHO05D008622 8.5e-31 137.5 100 58.0
Carub.0006s0932 Capsella rubella HOM05D007008 ORTHO05D008622 1.1e-30 137.1 100 57.0
PSO170G4073 Papaver somniferum HOM05D007008 ORTHO05D008622 1.1e-30 137.1 100 57.0
PSO357G0206 Papaver somniferum HOM05D007008 ORTHO05D008622 1.1e-30 137.1 100 57.0
Hund02976 Selenicereus undatus HOM05D007008 ORTHO05D008622 1.1e-30 137.1 100 58.0
Atru.chr7.2552 Acer truncatum HOM05D007008 ORTHO05D008622 1.4e-30 136.7 99 56.6
AUR62024793 Chenopodium quinoa HOM05D007008 ORTHO05D008622 1.4e-30 136.7 100 57.0
Ciclev10009999m.g Citrus clementina HOM05D007008 ORTHO05D008622 1.4e-30 136.7 99 56.6
Thhalv10016011m.g Eutrema salsugineum HOM05D007008 ORTHO05D008622 1.4e-30 136.7 100 56.0
Gohir.D06G104200 Gossypium hirsutum HOM05D007008 ORTHO05D008622 1.4e-30 136.7 99 56.6
PRCOL_00001314 Prasinoderma coloniale HOM05D007008 ORTHO05D008622 1.4e-30 136.7 102 60.8
FAN15G2831 Fragaria x ananassa HOM05D000756 ORTHO05D008622 1.9e-30 136.3 132 48.5
Sed0015687 Sechium edule HOM05D007008 ORTHO05D008622 1.9e-30 136.3 99 55.6
Thecc.09G014400 Theobroma cacao HOM05D007008 ORTHO05D008622 1.9e-30 136.3 99 55.6
Aqoxy7G03348 Aquilegia oxysepala HOM05D007008 ORTHO05D008622 2.5e-30 136.0 99 56.6
CANSAT25G2981 Cannabis sativa HOM05D007008 ORTHO05D008622 2.5e-30 136.0 99 55.6
Phvul.001G040900 Phaseolus vulgaris HOM05D007008 ORTHO05D008622 2.5e-30 136.0 99 54.5
MSTRG.13965 Avicennia marina HOM05D007008 ORTHO05D008622 3.2e-30 135.6 99 56.6
Duzib187G1435 Durio zibethinus HOM05D007008 ORTHO05D008622 3.2e-30 135.6 99 55.6
THA.LOC104799029 Tarenaya hassleriana HOM05D007008 ORTHO05D008622 3.2e-30 135.6 100 57.0
TWI34G0293 Tripterygium wilfordii HOM05D007008 ORTHO05D008622 3.2e-30 135.6 99 56.6
arahy.Tifrunner.gnm1.ann1.ENRJ0V Arachis hypogaea HOM05D007008 ORTHO05D008622 4.2e-30 135.2 99 55.6
Duzib150G0558 Durio zibethinus HOM05D007008 ORTHO05D008622 4.2e-30 135.2 99 55.6
Gohir.A06G102300 Gossypium hirsutum HOM05D007008 ORTHO05D008622 4.2e-30 135.2 99 55.6
TAR383G0422 Trochodendron aralioides HOM05D007008 ORTHO05D008622 4.2e-30 135.2 99 58.6
AL6G21390 Arabidopsis lyrata HOM05D007008 ORTHO05D008622 5.5e-30 134.8 99 56.6
HanXRQChr17g0538991 Helianthus annuus HOM05D007008 ORTHO05D008622 5.5e-30 134.8 98 59.2
AT5G10810 Arabidopsis thaliana HOM05D007008 ORTHO05D008622 7.2e-30 134.4 99 56.6
TAR626G0196 Trochodendron aralioides HOM05D007008 ORTHO05D008622 7.2e-30 134.4 103 54.4
CARHR202480 Cardamine hirsuta HOM05D007008 ORTHO05D008622 9.4e-30 134.0 100 54.0
Duzib168G0569 Durio zibethinus HOM05D007008 ORTHO05D008622 9.4e-30 134.0 99 54.5
Glyma.17G224100 Glycine max HOM05D007008 ORTHO05D008622 9.4e-30 134.0 99 52.5
Aa31LG3G16290 Aethionema arabicum HOM05D007008 ORTHO05D008622 1.2e-29 133.7 102 52.0
MD15G1042200 Malus domestica HOM05D007008 ORTHO05D008622 1.2e-29 133.7 99 54.5
Manes.16G130900 Manihot esculenta HOM05D007008 ORTHO05D008622 1.2e-29 133.7 99 54.5
FAN27G1693 Fragaria x ananassa HOM05D007008 ORTHO05D008622 1.6e-29 133.3 102 53.9
Sed0013935 Sechium edule HOM05D007008 ORTHO05D008622 1.6e-29 133.3 101 52.5
ECA240G3080 Erigeron canadensis HOM05D007008 ORTHO05D008622 2.1e-29 132.9 114 50.0
Glyma.14G101000 Glycine max HOM05D007008 ORTHO05D008622 2.1e-29 132.9 99 53.5
Lalb_Chr22g0361631 Lupinus albus HOM05D007008 ORTHO05D008622 2.1e-29 132.9 100 53.0
SGA_v2.0_scaffold169G38605 Striga asiatica HOM05D007008 ORTHO05D008622 2.1e-29 132.9 133 46.6
Migut.A00362 Erythranthe guttata HOM05D007008 ORTHO05D008622 2.7e-29 132.5 99 54.5
FvH4_2g41220 Fragaria vesca HOM05D007008 ORTHO05D008622 2.7e-29 132.5 99 54.5
PGR044G1005 Punica granatum HOM05D007008 ORTHO05D008622 2.7e-29 132.5 100 56.0
A02p00680 Brassica napus HOM05D000653 ORTHO05D002177 3.6e-29 132.1 100 53.0
C02p04680 Brassica napus HOM05D000653 ORTHO05D002177 3.6e-29 132.1 100 53.0
BolC2t06426H Brassica oleracea HOM05D000238 ORTHO05D001043 3.6e-29 132.1 100 53.0
BraA02t05052Z Brassica rapa HOM05D000238 ORTHO05D001043 3.6e-29 132.1 100 53.0
MD08G1054800 Malus domestica HOM05D007008 ORTHO05D008622 3.6e-29 132.1 99 53.5
Oeu006861.2 Olea europaea HOM05D007008 ORTHO05D008622 3.6e-29 132.1 100 54.0
SGA_v2.0_scaffold4G02166 Striga asiatica HOM05D007008 ORTHO05D008622 3.6e-29 132.1 99 55.6
BolC9t59417H Brassica oleracea HOM05D000238 ORTHO05D001043 4.6e-29 131.7 100 53.0
Lj5g0019856 Lotus japonicus HOM05D007008 ORTHO05D008622 4.6e-29 131.7 101 51.5
Oeu048545.1 Olea europaea HOM05D007008 ORTHO05D008622 4.6e-29 131.7 99 55.6
Pp3c15_19100 Physcomitrium patens HOM05D007008 ORTHO05D008622 4.6e-29 131.7 98 58.2
Potri.018G017300 Populus trichocarpa HOM05D007008 ORTHO05D008622 4.6e-29 131.7 99 54.5
TPR.G38860 Trifolium pratense HOM05D007008 ORTHO05D008622 4.6e-29 131.7 105 51.4
arahy.Tifrunner.gnm1.ann1.K1H867 Arachis hypogaea HOM05D007008 ORTHO05D008622 6.1e-29 131.3 99 53.5
BcaB08g37301 Brassica carinata HOM05D000238 ORTHO05D008622 6.1e-29 131.3 100 54.0
C09p65940 Brassica napus HOM05D007008 ORTHO05D008622 6.1e-29 131.3 100 53.0
HanXRQChr03g0081451 Helianthus annuus HOM05D007008 ORTHO05D008622 6.1e-29 131.3 101 53.5
Potri.006G265600 Populus trichocarpa HOM05D007008 ORTHO05D008622 6.1e-29 131.3 99 53.5
Rhsim02G0210500 Rhododendron simsii HOM05D007008 ORTHO05D008622 6.1e-29 131.3 108 53.7
BraA10t44733Z Brassica rapa HOM05D000238 ORTHO05D002998 7.9e-29 131.0 100 53.0
Gohir.A07G033600 Gossypium hirsutum HOM05D007008 ORTHO05D008622 1.4e-28 130.2 99 54.5
Gohir.D07G037200 Gossypium hirsutum HOM05D007008 ORTHO05D008622 1.4e-28 130.2 99 54.5
Gorai.001G038800 Gossypium raimondii HOM05D007008 ORTHO05D008622 1.4e-28 130.2 99 54.5
Sabra06G0208200 Salix brachista HOM05D007008 ORTHO05D008622 1.4e-28 130.2 102 52.0
THA.LOC104824959 Tarenaya hassleriana HOM05D007008 ORTHO05D008622 1.4e-28 130.2 100 55.0
TWI32G0141 Tripterygium wilfordii HOM05D007008 ORTHO05D008622 1.4e-28 130.2 99 51.5
Prupe.1G395400 Prunus persica HOM05D007008 ORTHO05D008622 2.3e-28 129.4 99 51.5
MSTRG.11785 Avicennia marina HOM05D007008 ORTHO05D008622 3.0e-28 129.0 99 53.5
BcaC03g13334 Brassica carinata HOM05D000653 ORTHO05D002177 3.0e-28 129.0 100 52.0
BcaNung06639 Brassica carinata HOM05D000653 ORTHO05D008622 3.9e-28 128.6 100 51.0
RcHm_v2.0_Chr6g0299291 Rosa chinensis HOM05D007008 ORTHO05D008622 5.1e-28 128.3 99 51.5
Medtr1g014230 Medicago truncatula HOM05D007008 ORTHO05D008622 6.7e-28 127.9 99 51.5
Eucgr.L00629 Eucalyptus grandis HOM05D007008 ORTHO05D008622 8.8e-28 127.5 110 52.7
SMO367G1120 Selaginella moellendorffii HOM05D007008 ORTHO05D008622 8.8e-28 127.5 98 52.0
Sopen08g002640 Solanum pennellii HOM05D007008 ORTHO05D008622 8.8e-28 127.5 94 54.3
Glyma.04G060200 Glycine max HOM05D007008 ORTHO05D008622 1.1e-27 127.1 97 50.5
Glyma.06G060700 Glycine max HOM05D007008 ORTHO05D008622 1.1e-27 127.1 99 50.5
Zm00001eb078360 Zea mays HOM05D007008 ORTHO05D008622 2.6e-27 125.9 101 49.5
Zm00001eb184500 Zea mays HOM05D007008 ORTHO05D008622 4.4e-27 125.2 98 51.0
Lsat_1_v5_gn_5_62001 Lactuca sativa HOM05D007008 ORTHO05D008622 5.7e-27 124.8 92 54.3
Pp3c9_4080 Physcomitrium patens HOM05D007008 ORTHO05D008622 5.7e-27 124.8 98 55.1
Sabra18G0020700 Salix brachista HOM05D007008 ORTHO05D008622 1.3e-26 123.6 103 50.5
GSVIVG01035984001 Vitis vinifera HOM05D007008 ORTHO05D008622 2.2e-26 122.9 92 53.3
CBR_g34568 Chara braunii HOM05D007008 ORTHO05D008622 4.8e-26 121.7 94 56.4
Cc11_g00350 Coffea canephora HOM05D007008 ORTHO05D008622 5.3e-25 118.2 92 52.2
SMO197G0113 Selaginella moellendorffii HOM05D007008 ORTHO05D008622 7.7e-24 114.4 101 41.6
AUR62032427 Chenopodium quinoa HOM05D007008 ORTHO05D008622 3.6e-21 105.5 72 61.1
MELO3C030305.2 Cucumis melo HOM05D007008 ORTHO05D008622 4.7e-21 105.1 99 46.5
COL.COLO4_18962 Corchorus olitorius HOM05D002170 ORTHO05D005003 1.8e-20 103.2 96 50.0
HPP92_017465 Vanilla planifolia HOM05D007008 ORTHO05D008622 1.8e-20 103.2 73 61.6
Ah.12g060690 Amaranthus hybridus HOM05D007008 ORTHO05D008622 2.3e-20 102.8 72 59.7
CSS0004043 Camellia sinensis var. sinensis HOM05D007008 ORTHO05D008622 3.0e-20 102.4 72 58.3
Gorai.010G119400 Gossypium raimondii HOM05D007008 ORTHO05D008622 3.9e-20 102.1 72 58.3
Psat6g026400 Pisum sativum HOM05D007008 ORTHO05D008622 3.9e-20 102.1 73 57.5
Hund25613 Selenicereus undatus HOM05D007008 ORTHO05D008622 3.3e-19 99.0 73 56.2
Sp6g32640 Schrenkiella parvula HOM05D000653 ORTHO05D002177 5.7e-19 98.2 80 50.0
CiPaw.07G231200 Carya illinoinensis HOM05D007008 ORTHO05D008622 9.7e-19 97.4 69 55.1
arahy.Tifrunner.gnm1.ann1.T6XV8N Arachis hypogaea HOM05D007008 ORTHO05D008622 1.6e-16 90.1 80 43.8
Os04g0499200 Oryza sativa ssp. japonica HOM05D007008 ORTHO05D008622 2.0e-16 89.7 74 45.9
SEGI_13302 Sequoiadendron giganteum HOM05D007008 ORTHO05D008622 2.5e-14 82.8 69 46.4
Thecc.02G190100 Theobroma cacao HOM05D007008 ORTHO05D008622 5.2e-12 75.1 102 37.3
Thecc.01G194900 Theobroma cacao HOM05D007008 ORTHO05D008622 1.7e-10 70.1 76 39.5
Thecc.02G024500 Theobroma cacao HOM05D007008 ORTHO05D008622 1.7e-10 70.1 64 43.8
Os02g0611450 Oryza sativa ssp. japonica HOM05D007008 ORTHO05D008622 8.5e-07 57.8 48 45.8


User provided reference genes

Program Settings