Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO13G452 Micromonas commoda HOM05D006984 ORTHO05D008773 1.5e-138 496.1 249 100.0
Mapoly0008s0218 Marchantia polymorpha HOM05D006984 ORTHO05D008773 9.7e-32 141.4 198 40.9
Pp3c4_15070 Physcomitrium patens HOM05D006984 ORTHO05D008773 1.7e-28 130.6 198 38.9
AagrBONN_evm.TU.Sc2ySwM_117.1863 Anthoceros agrestis HOM05D006984 ORTHO05D008773 2.9e-28 129.8 179 43.6
Peaxi162Scf00064g01321 Petunia axillaris HOM05D006984 ORTHO05D008773 6.5e-28 128.6 215 34.4
PGSC0003DMG400029399 Solanum tuberosum HOM05D006984 ORTHO05D008773 5.5e-27 125.6 226 33.6
Solyc12g094720.3 Solanum lycopersicum HOM05D006984 ORTHO05D008773 2.7e-26 123.2 232 33.2
Sopen12g031620 Solanum pennellii HOM05D006984 ORTHO05D008773 2.7e-26 123.2 226 33.2
CAN.G208.41 Capsicum annuum HOM05D006984 ORTHO05D008773 4.7e-26 122.5 208 34.1
unitig_22.g5726 Utricularia gibba HOM05D006984 ORTHO05D008773 1.8e-25 120.6 205 38.0
CBR_g51937 Chara braunii HOM05D006984 ORTHO05D008773 2.6e-24 116.7 204 35.8
SGA_v2.0_scaffold220G42646 Striga asiatica HOM05D006984 ORTHO05D008773 5.7e-24 115.5 190 36.8
Lsat_1_v5_gn_9_48361 Lactuca sativa HOM05D006984 ORTHO05D008773 2.2e-23 113.6 197 34.5
Oeu035863.2 Olea europaea HOM05D006984 ORTHO05D008773 2.2e-23 113.6 195 34.4
Cpa.g.sc26.14 Carica papaya HOM05D006984 ORTHO05D008773 3.7e-23 112.8 217 30.4
MSTRG.24516 Avicennia marina HOM05D006984 ORTHO05D008773 8.2e-23 111.7 195 34.9
GSVIVG01013427001 Vitis vinifera HOM05D006984 ORTHO05D008773 2.4e-22 110.2 217 33.2
Dinv13757 Davidia involucrata HOM05D006984 ORTHO05D008773 5.3e-22 109.0 195 33.3
HanXRQChr09g0241901 Helianthus annuus HOM05D006984 ORTHO05D008773 7.0e-22 108.6 201 34.8
Cc10_g00260 Coffea canephora HOM05D006984 ORTHO05D008773 9.1e-22 108.2 170 35.9
TWI56G0056 Tripterygium wilfordii HOM05D006984 ORTHO05D008773 1.2e-21 107.8 200 32.5
Nitab4.5_0000407g0010 Nicotiana tabacum HOM05D006984 ORTHO05D008773 1.5e-21 107.5 165 36.4
Potri.005G256600 Populus trichocarpa HOM05D006984 ORTHO05D008773 2.6e-21 106.7 180 33.9
Sed0024892 Sechium edule HOM05D006984 ORTHO05D008773 2.6e-21 106.7 186 34.9
Glyma.06G014500 Glycine max HOM05D006984 ORTHO05D008773 3.4e-21 106.3 197 31.0
Hma1.2p1_0489F.1_g164090 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 3.4e-21 106.3 174 37.4
THA.LOC104813736 Tarenaya hassleriana HOM05D006984 ORTHO05D008773 3.4e-21 106.3 247 32.4
ECA232G4329 Erigeron canadensis HOM05D006984 ORTHO05D008773 5.9e-21 105.5 197 32.5
Glyma.04G014500 Glycine max HOM05D006984 ORTHO05D008773 5.9e-21 105.5 197 31.5
Migut.N02987 Erythranthe guttata HOM05D006984 ORTHO05D008773 7.7e-21 105.1 197 34.5
Lj1g0018204 Lotus japonicus HOM05D006984 ORTHO05D008773 7.7e-21 105.1 245 33.1
AL2G36590 Arabidopsis lyrata HOM05D006984 ORTHO05D008773 1.0e-20 104.8 196 31.1
Eucgr.F01822 Eucalyptus grandis HOM05D006984 ORTHO05D008773 1.0e-20 104.8 180 32.8
Medtr3g116110 Medicago truncatula HOM05D006984 ORTHO05D008773 1.0e-20 104.8 198 30.3
Sp5g31620 Schrenkiella parvula HOM05D006984 ORTHO05D008773 1.0e-20 104.8 197 32.0
Actinidia17077 Actinidia chinensis HOM05D006984 ORTHO05D008773 1.3e-20 104.4 174 34.5
CANSAT25G0748 Cannabis sativa HOM05D006984 ORTHO05D008773 1.3e-20 104.4 174 36.8
AUR62024096 Chenopodium quinoa HOM05D006984 ORTHO05D008773 1.3e-20 104.4 217 30.4
CsaV3_6G035930 Cucumis sativus L. HOM05D006984 ORTHO05D008773 2.2e-20 103.6 197 32.0
Psat5g008560 Pisum sativum HOM05D006984 ORTHO05D008773 2.2e-20 103.6 214 29.9
TPR.G38185 Trifolium pratense HOM05D006984 ORTHO05D008773 2.2e-20 103.6 187 32.1
BcaC08g47243 Brassica carinata HOM05D006984 ORTHO05D008773 2.9e-20 103.2 199 31.2
CSS0020436 Camellia sinensis var. sinensis HOM05D006984 ORTHO05D008773 2.9e-20 103.2 173 34.1
EL10Ac1g01871 Beta vulgaris HOM05D006984 ORTHO05D008773 6.5e-20 102.1 243 32.1
AUR62035170 Chenopodium quinoa HOM05D006984 ORTHO05D008773 6.5e-20 102.1 226 30.1
MELO3C026518.2 Cucumis melo HOM05D006984 ORTHO05D008773 6.5e-20 102.1 197 31.5
Nn6g31626 Nelumbo nucifera HOM05D006984 ORTHO05D008773 6.5e-20 102.1 187 31.6
PSO541G1597 Papaver somniferum HOM05D006984 ORTHO05D008773 6.5e-20 102.1 205 33.7
AT1G76450 Arabidopsis thaliana HOM05D006984 ORTHO05D008773 8.5e-20 101.7 196 30.6
BraA07t31741Z Brassica rapa HOM05D006984 ORTHO05D008773 8.5e-20 101.7 199 30.7
Atru.chr13.60 Acer truncatum HOM05D006984 ORTHO05D008773 1.1e-19 101.3 200 32.0
ATR0001G027 Amborella trichopoda HOM05D006984 ORTHO05D008773 1.1e-19 101.3 173 35.3
Ciclev10001894m.g Citrus clementina HOM05D006984 ORTHO05D008773 1.1e-19 101.3 182 34.6
Os08g0512500 Oryza sativa ssp. japonica HOM05D006984 ORTHO05D008773 1.1e-19 101.3 189 36.5
Manes.05G127800 Manihot esculenta HOM05D006984 ORTHO05D008773 1.4e-19 100.9 180 37.2
BolC6t40095H Brassica oleracea HOM05D006984 ORTHO05D008773 1.9e-19 100.5 199 30.2
Carub.0002s2337 Capsella rubella HOM05D006984 ORTHO05D008773 1.9e-19 100.5 198 31.3
CARHR070010 Cardamine hirsuta HOM05D006984 ORTHO05D008773 1.9e-19 100.5 205 30.2
Lj3P797T41 Lonicera japonica HOM05D006984 ORTHO05D008773 1.9e-19 100.5 176 33.0
Lj4A811G120 Lonicera japonica HOM05D006984 ORTHO05D008773 1.9e-19 100.5 162 34.0
BcaC08g47152 Brassica carinata HOM05D006984 ORTHO05D008773 2.5e-19 100.1 233 30.5
Ca_15385_v3 Cicer arietinum L. HOM05D006984 ORTHO05D008773 2.5e-19 100.1 210 29.5
C06p50690 Brassica napus HOM05D006984 ORTHO05D008773 3.2e-19 99.8 194 30.4
Aa31LG4G6540 Aethionema arabicum HOM05D006984 ORTHO05D008773 4.2e-19 99.4 205 29.3
VMungo1309G1928 Vigna mungo HOM05D006984 ORTHO05D008773 4.2e-19 99.4 236 28.0
Sc15g0004070 Simmondsia chinensis HOM05D006984 ORTHO05D008773 5.5e-19 99.0 162 32.7
CiPaw.07G133500 Carya illinoinensis HOM05D006984 ORTHO05D008773 7.2e-19 98.6 192 32.3
Cre10.g446350 Chlamydomonas reinhardtii HOM05D006984 ORTHO05D008773 7.2e-19 98.6 261 26.1
FvH4_5g26100 Fragaria vesca HOM05D006984 ORTHO05D008773 1.2e-18 97.8 199 32.2
FAN18G2056 Fragaria x ananassa HOM05D006984 ORTHO05D008773 1.6e-18 97.4 198 32.3
CDE05G0055 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 2.1e-18 97.1 140 36.4
CDE05G2674 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 2.1e-18 97.1 174 32.8
Sabra05G0198700 Salix brachista HOM05D006984 ORTHO05D008773 2.7e-18 96.7 241 27.4
TAR628G1538 Trochodendron aralioides HOM05D006984 ORTHO05D008773 2.7e-18 96.7 207 30.0
vmacro21767 Vaccinium macrocarpon HOM05D006984 ORTHO05D008773 3.6e-18 96.3 199 30.2
A07p42120 Brassica napus HOM05D006984 ORTHO05D008773 4.7e-18 95.9 234 27.4
QL02p015743 Quercus lobata HOM05D006984 ORTHO05D008773 4.7e-18 95.9 197 29.4
MD16G1283100 Malus domestica HOM05D006984 ORTHO05D008773 6.1e-18 95.5 146 34.9
Phvul.009G008400 Phaseolus vulgaris HOM05D006984 ORTHO05D008773 6.1e-18 95.5 225 29.3
Thecc.08G099800 Theobroma cacao HOM05D006984 ORTHO05D008773 6.1e-18 95.5 159 33.3
arahy.Tifrunner.gnm1.ann1.H7AW2T Arachis hypogaea HOM05D006984 ORTHO05D008773 8.0e-18 95.1 248 29.8
Thhalv10019042m.g Eutrema salsugineum HOM05D006984 ORTHO05D008773 1.4e-17 94.4 217 29.5
arahy.Tifrunner.gnm1.ann1.QT2TB5 Arachis hypogaea HOM05D006984 ORTHO05D008773 2.3e-17 93.6 249 29.3
Duzib116G0393 Durio zibethinus HOM05D006984 ORTHO05D008773 2.3e-17 93.6 224 29.9
RcHm_v2.0_Chr7g0216691 Rosa chinensis HOM05D006984 ORTHO05D008773 2.3e-17 93.6 198 30.3
Hund01834 Selenicereus undatus HOM05D006984 ORTHO05D008773 3.0e-17 93.2 175 33.7
Aqoxy6G02992 Aquilegia oxysepala HOM05D006984 ORTHO05D008773 5.2e-17 92.4 199 29.6
Lalb_Chr23g0265511 Lupinus albus HOM05D006984 ORTHO05D008773 5.2e-17 92.4 197 28.9
Cfa014138 Carpinus fangiana HOM05D006984 ORTHO05D008773 1.1e-16 91.3 195 33.3
PGR083G2821 Punica granatum HOM05D006984 ORTHO05D008773 1.1e-16 91.3 147 36.7
SMO245G0004 Selaginella moellendorffii HOM05D006984 ORTHO05D008773 1.1e-16 91.3 184 37.5
Haze_22863 Corylus avellana HOM05D006984 ORTHO05D008773 5.7e-16 89.0 194 31.4
ClCG08G009180 Citrullus lanatus HOM05D006984 ORTHO05D008773 7.4e-16 88.6 165 32.7
MBI04_g31208_MAGBIO Magnolia biondii HOM05D006984 ORTHO05D008773 7.4e-16 88.6 163 30.7
FAN08G1099 Fragaria x ananassa HOM05D006984 ORTHO05D008773 1.7e-15 87.4 195 31.3
FAN13G1472 Fragaria x ananassa HOM05D006984 ORTHO05D008773 1.7e-15 87.4 162 34.6
Hma1.2p1_0489F.1_g164100 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 2.2e-15 87.0 124 38.7
PRCOL_00004638 Prasinoderma coloniale HOM05D006984 ORTHO05D008773 2.2e-15 87.0 175 33.7
Nitab4.5_0003423g0020 Nicotiana tabacum HOM05D006984 ORTHO05D008773 8.2e-15 85.1 194 31.4
Prupe.5G005500 Prunus persica HOM05D006984 ORTHO05D008773 1.8e-14 84.0 196 28.6
Gohir.A01G188600 Gossypium hirsutum HOM05D006984 ORTHO05D008773 7.0e-14 82.0 200 29.5
Gohir.D01G180900 Gossypium hirsutum HOM05D006984 ORTHO05D008773 7.0e-14 82.0 200 29.5
Gorai.002G221600 Gossypium raimondii HOM05D006984 ORTHO05D008773 9.1e-14 81.6 200 29.5
FAN04G1410 Fragaria x ananassa HOM05D006984 ORTHO05D008773 7.7e-13 78.6 163 30.7
COL.COLO4_12298 Corchorus olitorius HOM05D006984 ORTHO05D008773 1.3e-12 77.8 163 30.1
PGSC0003DMG400008742 Solanum tuberosum HOM05D006984 ORTHO05D008773 4.2e-11 72.8 105 38.1
Ah.11g041950 Amaranthus hybridus HOM05D006984 ORTHO05D008773 2.0e-08 63.9 131 30.5
Rhsim06G0003200 Rhododendron simsii HOM05D006984 ORTHO05D008773 2.2e-07 60.5 104 30.8
Zm00001eb035340 Zea mays HOM05D006984 ORTHO05D008773 8.2e-07 58.5 154 33.8
FvH4_6g06280 Fragaria vesca HOM05D007200 ORTHO05D009030 1.1e-06 58.2 180 28.3
FAN14G1797 Fragaria x ananassa HOM05D007200 ORTHO05D009030 1.1e-06 58.2 180 28.3


User provided reference genes

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