Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO13G181 Micromonas commoda HOM05D002428 ORTHO05D008664 1.1e-287 992.6 498 100.0
PRCOL_00004793 Prasinoderma coloniale HOM05D002428 ORTHO05D008664 1.1e-26 125.6 312 32.1
Cre19.g750397 Chlamydomonas reinhardtii HOM05D002428 ORTHO05D008664 1.5e-23 115.2 292 30.5
ECA233G2351 Erigeron canadensis HOM05D002428 ORTHO05D008664 3.6e-09 67.4 158 30.4
Migut.G00668 Erythranthe guttata HOM05D002428 ORTHO05D008664 1.0e-08 65.9 130 36.9
Eucgr.H00072 Eucalyptus grandis HOM05D002428 ORTHO05D008664 1.8e-08 65.1 122 38.5
EL10Ac9g21669 Beta vulgaris HOM05D002428 ORTHO05D008664 2.3e-08 64.7 167 28.7
Oeu006723.1 Olea europaea HOM05D002428 ORTHO05D008664 2.3e-08 64.7 162 32.1
HPP92_025384 Vanilla planifolia HOM05D002428 ORTHO05D008664 3.0e-08 64.3 161 31.7
FvH4_4g00470 Fragaria vesca HOM05D002428 ORTHO05D008664 1.5e-07 62.0 147 34.0
THA.LOC104808718 Tarenaya hassleriana HOM05D002428 ORTHO05D008664 1.9e-07 61.6 148 31.8
Aa31LG9G3990 Aethionema arabicum HOM05D002428 ORTHO05D008664 2.5e-07 61.2 154 29.2
HanXRQChr07g0185701 Helianthus annuus HOM05D002428 ORTHO05D008664 3.3e-07 60.8 130 31.5
Dinv29583 Davidia involucrata HOM05D002428 ORTHO05D005085 4.3e-07 60.5 200 30.5
Medtr1g072690 Medicago truncatula HOM05D002428 ORTHO05D008664 4.3e-07 60.5 65 49.2
SalBow8G5518 Salvia bowleyana HOM05D002428 ORTHO05D008664 5.7e-07 60.1 130 35.4
Cc03_g07620 Coffea canephora HOM05D002428 ORTHO05D008664 7.4e-07 59.7 152 34.2
Peaxi162Scf00047g00729 Petunia axillaris HOM05D002428 ORTHO05D008664 7.4e-07 59.7 81 38.3
TPR.G1546 Trifolium pratense HOM05D002428 ORTHO05D008664 7.4e-07 59.7 143 35.0
Ah.01g006100 Amaranthus hybridus HOM05D002428 ORTHO05D008664 9.7e-07 59.3 213 27.7
FAN12G4076 Fragaria x ananassa HOM05D002428 ORTHO05D008664 9.7e-07 59.3 142 32.4
FAN22G0466 Fragaria x ananassa HOM05D002428 ORTHO05D005085 9.7e-07 59.3 142 32.4
PGR142G3513 Punica granatum HOM05D002428 ORTHO05D008664 1.3e-06 58.9 152 30.9
MD04G1005000 Malus domestica HOM05D002428 ORTHO05D008664 2.2e-06 58.2 127 31.5
Lsat_1_v5_gn_6_59880 Lactuca sativa HOM05D002428 ORTHO05D008664 2.8e-06 57.8 126 31.7
Nitab4.5_0004974g0040 Nicotiana tabacum HOM05D002428 ORTHO05D008664 2.8e-06 57.8 81 40.7
RcHm_v2.0_Chr4g0385901 Rosa chinensis HOM05D002428 ORTHO05D008664 2.8e-06 57.8 201 29.9
Gohir.D10G143300 Gossypium hirsutum HOM05D002428 ORTHO05D008664 3.7e-06 57.4 131 30.5
PSO017G5948 Papaver somniferum HOM05D002428 ORTHO05D008664 3.7e-06 57.4 204 27.5
Phvul.010G104000 Phaseolus vulgaris HOM05D002428 ORTHO05D008664 3.7e-06 57.4 73 42.5
Potri.001G049900 Populus trichocarpa HOM05D002428 ORTHO05D008664 3.7e-06 57.4 97 37.1
Carub.0007s2880 Capsella rubella HOM05D002428 ORTHO05D008664 4.8e-06 57.0 138 31.9
Gohir.A10G122700 Gossypium hirsutum HOM05D002428 ORTHO05D008664 6.3e-06 56.6 132 30.3
Lj5g0020317 Lotus japonicus HOM05D002428 ORTHO05D008664 8.2e-06 56.2 61 47.5
Manes.15G051900 Manihot esculenta HOM05D002428 ORTHO05D008664 8.2e-06 56.2 89 34.8


User provided reference genes

Program Settings