Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO13G087 Micromonas commoda HOM05D006036 ORTHO05D007736 2.4e-104 382.1 186 100.0
Mapoly0007s0216 Marchantia polymorpha HOM05D006036 ORTHO05D007736 2.4e-43 179.5 161 55.3
SMO143G0045 Selaginella moellendorffii HOM05D006036 ORTHO05D007736 4.1e-43 178.7 163 55.2
Cre11.g468750 Chlamydomonas reinhardtii HOM05D006036 ORTHO05D007736 3.2e-40 169.1 171 48.0
Pp3c23_9860 Physcomitrium patens HOM05D006036 ORTHO05D007736 2.1e-39 166.4 161 52.8
AagrBONN_evm.TU.Sc2ySwM_117.1558 Anthoceros agrestis HOM05D006036 ORTHO05D007736 1.4e-38 163.7 163 51.5
SEGI_01363 Sequoiadendron giganteum HOM05D006036 ORTHO05D007736 5.7e-37 158.3 146 54.8
SalBow5G3583 Salvia bowleyana HOM05D006036 ORTHO05D007736 7.0e-35 151.4 159 50.3
SalBow5G0783 Salvia bowleyana HOM05D006036 ORTHO05D007736 5.9e-34 148.3 159 49.7
Oeu037915.1 Olea europaea HOM05D006036 ORTHO05D007736 1.7e-33 146.7 159 48.4
Lsat_1_v5_gn_4_40940 Lactuca sativa HOM05D006036 ORTHO05D007736 8.5e-33 144.4 173 45.1
Sed0006891 Sechium edule HOM05D006036 ORTHO05D007736 8.5e-33 144.4 160 46.2
CsaV3_6G006160 Cucumis sativus L. HOM05D006036 ORTHO05D007736 1.1e-32 144.1 160 46.9
HanXRQChr16g0520241 Helianthus annuus HOM05D006036 ORTHO05D007736 1.9e-32 143.3 159 46.5
unitig_8.g4983 Utricularia gibba HOM05D006036 ORTHO05D007736 1.9e-32 143.3 167 47.3
Lalb_Chr07g0189801 Lupinus albus HOM05D006036 ORTHO05D007736 2.5e-32 142.9 159 46.5
Sed0014119 Sechium edule HOM05D006036 ORTHO05D007736 3.2e-32 142.5 160 46.2
Aqoxy7G00627 Aquilegia oxysepala HOM05D006036 ORTHO05D007736 4.2e-32 142.1 161 45.3
MSTRG.4890 Avicennia marina HOM05D006036 ORTHO05D007736 4.2e-32 142.1 141 51.1
Cc02_g36690 Coffea canephora HOM05D006036 ORTHO05D007736 4.2e-32 142.1 173 45.7
Eucgr.E01417 Eucalyptus grandis HOM05D006036 ORTHO05D007736 7.2e-32 141.4 173 45.7
ECA234G4399 Erigeron canadensis HOM05D006036 ORTHO05D007736 1.6e-31 140.2 173 45.1
AUR62004220 Chenopodium quinoa HOM05D006036 ORTHO05D007736 2.1e-31 139.8 156 46.2
GSVIVG01027612001 Vitis vinifera HOM05D006036 ORTHO05D007736 3.6e-31 139.0 173 46.2
Ciclev10022362m.g Citrus clementina HOM05D006036 ORTHO05D007736 4.7e-31 138.7 160 46.2
Cpa.g.sc349.4 Carica papaya HOM05D006036 ORTHO05D007736 6.1e-31 138.3 159 46.5
Sc02g0002580 Simmondsia chinensis HOM05D006036 ORTHO05D007736 1.0e-30 137.5 159 43.4
Ah.16g109830 Amaranthus hybridus HOM05D006036 ORTHO05D007736 3.0e-30 136.0 159 44.7
Hund17020 Selenicereus undatus HOM05D006036 ORTHO05D007736 4.0e-30 135.6 157 45.9
MBI04_g35276_MAGBIO Magnolia biondii HOM05D006036 ORTHO05D007736 5.2e-30 135.2 170 42.9
AUR62013628 Chenopodium quinoa HOM05D006036 ORTHO05D007736 6.8e-30 134.8 159 44.7
Duzib133G1287 Durio zibethinus HOM05D006036 ORTHO05D007736 6.8e-30 134.8 159 46.5
Glyma.14G070200 Glycine max HOM05D006036 ORTHO05D007736 6.8e-30 134.8 157 45.9
Zm00001eb210410 Zea mays HOM05D006036 ORTHO05D007736 6.8e-30 134.8 159 44.7
Actinidia12688 Actinidia chinensis HOM05D006036 ORTHO05D007736 8.8e-30 134.4 173 45.7
EL10Ac1g00899 Beta vulgaris HOM05D006036 ORTHO05D007736 1.5e-29 133.7 159 44.0
TPR.G9852 Trifolium pratense HOM05D006036 ORTHO05D007736 1.5e-29 133.7 159 44.7
Rhsim01G0147400 Rhododendron simsii HOM05D006036 ORTHO05D007736 2.0e-29 133.3 159 46.5
CDE02G2016 Ceratophyllum demersum HOM05D006036 ORTHO05D007736 2.6e-29 132.9 159 45.9
Gohir.A08G134500 Gossypium hirsutum HOM05D006036 ORTHO05D007736 2.6e-29 132.9 160 46.2
Glyma.03G023900 Glycine max HOM05D006036 ORTHO05D007736 3.4e-29 132.5 165 44.8
TWI14G1308 Tripterygium wilfordii HOM05D006036 ORTHO05D007736 3.4e-29 132.5 157 45.9
Potri.002G148400 Populus trichocarpa HOM05D006036 ORTHO05D007736 4.4e-29 132.1 165 44.2
Sopen01g037100 Solanum pennellii HOM05D006036 ORTHO05D007736 4.4e-29 132.1 159 45.9
Glyma.01G142900 Glycine max HOM05D006036 ORTHO05D007736 5.7e-29 131.7 157 45.2
Medtr4g023550 Medicago truncatula HOM05D006036 ORTHO05D007736 9.8e-29 131.0 159 44.7
Sabra02G0115600 Salix brachista HOM05D006036 ORTHO05D007736 9.8e-29 131.0 159 45.3
Ca_03013_v3 Cicer arietinum L. HOM05D006036 ORTHO05D007736 1.7e-28 130.2 159 44.0
Psat7g231640 Pisum sativum HOM05D006036 ORTHO05D007736 1.7e-28 130.2 159 44.7
Sabra02G0117300 Salix brachista HOM05D006036 ORTHO05D007736 1.7e-28 130.2 159 44.7
Solyc01g091360.4 Solanum lycopersicum HOM05D006036 ORTHO05D007736 1.7e-28 130.2 159 45.3
CSS0011162 Camellia sinensis var. sinensis HOM05D006036 ORTHO05D007736 2.2e-28 129.8 173 42.8
vmacro21008 Vaccinium macrocarpon HOM05D006036 ORTHO05D007736 2.2e-28 129.8 157 45.9
CSS0022013 Camellia sinensis var. sinensis HOM05D006036 ORTHO05D007736 2.8e-28 129.4 173 42.8
Manes.05G045200 Manihot esculenta HOM05D006036 ORTHO05D007736 2.8e-28 129.4 160 45.0
Thecc.01G376100 Theobroma cacao HOM05D006036 ORTHO05D007736 3.7e-28 129.0 159 45.9
BcaC07g42642 Brassica carinata HOM05D006036 ORTHO05D007736 4.8e-28 128.6 159 44.0
QL08p052466 Quercus lobata HOM05D006036 ORTHO05D007736 6.3e-28 128.3 173 43.4
Glyma.08G286100 Glycine max HOM05D006036 ORTHO05D007736 8.3e-28 127.9 172 42.4
Os03g0858700 Oryza sativa ssp. japonica HOM05D006036 ORTHO05D007736 8.3e-28 127.9 159 42.8
PGSC0003DMG400012774 Solanum tuberosum HOM05D006036 ORTHO05D007736 8.3e-28 127.9 173 43.4
A09p53070 Brassica napus HOM05D006036 ORTHO05D007736 1.1e-27 127.5 159 44.0
CiPaw.01G261900 Carya illinoinensis HOM05D006036 ORTHO05D007736 1.1e-27 127.5 159 45.3
Haze_16816 Corylus avellana HOM05D006036 ORTHO05D007736 1.1e-27 127.5 159 44.7
Nitab4.5_0005372g0020 Nicotiana tabacum HOM05D006036 ORTHO05D007736 1.1e-27 127.5 161 43.5
BraA09t40733Z Brassica rapa HOM05D006036 ORTHO05D007736 1.4e-27 127.1 159 44.0
Cfa001720 Carpinus fangiana HOM05D006036 ORTHO05D007736 1.4e-27 127.1 159 44.7
arahy.Tifrunner.gnm1.ann1.B3VI1A Arachis hypogaea HOM05D006036 ORTHO05D007736 1.8e-27 126.7 159 44.0
arahy.Tifrunner.gnm1.ann1.Y8TVDJ Arachis hypogaea HOM05D006036 ORTHO05D007736 1.8e-27 126.7 159 44.0
BcaC07g40602 Brassica carinata HOM05D006036 ORTHO05D007736 1.8e-27 126.7 159 43.4
C08p35770 Brassica napus HOM05D006036 ORTHO05D007736 1.8e-27 126.7 159 43.4
BolC8t51167H Brassica oleracea HOM05D006036 ORTHO05D007736 1.8e-27 126.7 159 43.4
Nn1g01232 Nelumbo nucifera HOM05D006036 ORTHO05D007736 1.8e-27 126.7 161 44.1
PGR042G0035 Punica granatum HOM05D006036 ORTHO05D007736 1.8e-27 126.7 159 44.7
Lj3g0008791 Lotus japonicus HOM05D006036 ORTHO05D007736 2.4e-27 126.3 159 44.7
THA.LOC104802443 Tarenaya hassleriana HOM05D006036 ORTHO05D007736 2.4e-27 126.3 164 43.9
Phvul.010G084400 Phaseolus vulgaris HOM05D006036 ORTHO05D007736 3.1e-27 125.9 159 44.0
ATR0810G113 Amborella trichopoda HOM05D006036 ORTHO05D007736 5.4e-27 125.2 152 44.1
DCAR_031531 Daucus carota HOM05D006036 ORTHO05D007736 7.0e-27 124.8 146 44.5
Sp5g02440 Schrenkiella parvula HOM05D006036 ORTHO05D007736 7.0e-27 124.8 159 42.8
Carub.0005s2756 Capsella rubella HOM05D006036 ORTHO05D007736 9.1e-27 124.4 159 44.0
Dinv32378 Davidia involucrata HOM05D006036 ORTHO05D007736 1.6e-26 123.6 146 44.5
Medtr7g074920 Medicago truncatula HOM05D006036 ORTHO05D007736 1.6e-26 123.6 160 43.1
FAN03G0372 Fragaria x ananassa HOM05D006036 ORTHO05D007736 2.7e-26 122.9 159 44.0
AL5G43130 Arabidopsis lyrata HOM05D006036 ORTHO05D007736 3.5e-26 122.5 159 42.1
AT3G60810 Arabidopsis thaliana HOM05D006036 ORTHO05D007736 3.5e-26 122.5 159 42.1
MD02G1204100 Malus domestica HOM05D006036 ORTHO05D007736 5.9e-26 121.7 159 42.8
FAN01G0425 Fragaria x ananassa HOM05D006036 ORTHO05D007736 7.7e-26 121.3 173 42.8
Lj9A569G50 Lonicera japonica HOM05D006036 ORTHO05D007736 7.7e-26 121.3 128 49.2
Prupe.2G145700 Prunus persica HOM05D006036 ORTHO05D007736 7.7e-26 121.3 159 43.4
RcHm_v2.0_Chr1g0350591 Rosa chinensis HOM05D006036 ORTHO05D007736 7.7e-26 121.3 159 44.0
CARHR171200 Cardamine hirsuta HOM05D006036 ORTHO05D007736 1.0e-25 120.9 159 42.1
Thhalv10006234m.g Eutrema salsugineum HOM05D006036 ORTHO05D007736 1.0e-25 120.9 159 43.4
FvH4_7g11910 Fragaria vesca HOM05D006036 ORTHO05D007736 1.0e-25 120.9 159 43.4
FAN10G3538 Fragaria x ananassa HOM05D006036 ORTHO05D007736 1.3e-25 120.6 157 43.9
FAN10G0738 Fragaria x ananassa HOM05D006036 ORTHO05D007736 1.7e-25 120.2 156 44.2
Aa31LG10G15050 Aethionema arabicum HOM05D006036 ORTHO05D007736 3.8e-25 119.0 141 45.4
CANSAT56G2189 Cannabis sativa HOM05D006036 ORTHO05D007736 8.6e-25 117.9 159 41.5
vmacro21009 Vaccinium macrocarpon HOM05D006036 ORTHO05D007736 3.3e-24 115.9 146 44.5
Atru.chr5.310 Acer truncatum HOM05D006036 ORTHO05D007736 9.5e-24 114.4 166 39.2
Gohir.D08G155400 Gossypium hirsutum HOM05D006036 ORTHO05D007736 6.1e-23 111.7 127 44.1
PSO782G0421 Papaver somniferum HOM05D006036 ORTHO05D007736 2.8e-20 102.8 175 36.6
MELO3C035247.2 Cucumis melo HOM05D006036 ORTHO05D007736 4.9e-20 102.1 114 50.0
ClCG06G000370 Citrullus lanatus HOM05D006036 ORTHO05D007736 8.3e-20 101.3 114 48.2
PSO478G2400 Papaver somniferum HOM05D006036 ORTHO05D007736 1.1e-19 100.9 175 36.6
Hma1.2p1_1122F.1_g259290 Hydrangea macrophylla HOM05D006036 ORTHO05D007736 1.6e-18 97.1 159 37.7
COL.COLO4_12549 Corchorus olitorius HOM05D006036 ORTHO05D007736 2.9e-17 92.8 103 44.7
CBR_g54966 Chara braunii HOM05D006036 ORTHO05D007736 1.5e-16 90.5 93 54.8
CAN.G388.12 Capsicum annuum HOM05D006036 ORTHO05D007736 1.9e-16 90.1 155 38.1
Peaxi162Scf00021g01720 Petunia axillaris HOM05D006036 ORTHO05D007736 2.5e-16 89.7 113 47.8
VMungo0331G0186 Vigna mungo HOM05D006036 ORTHO05D007736 8.0e-15 84.7 100 49.0
SGA_v2.0_scaffold153G37014 Striga asiatica HOM05D006036 ORTHO05D001464 1.4e-14 84.0 137 37.2
Lalb_Chr03g0039561 Lupinus albus HOM05D006036 ORTHO05D007736 1.8e-14 83.6 104 39.4
VMungo0251G0926 Vigna mungo HOM05D006036 ORTHO05D007736 5.2e-14 82.0 100 47.0
Migut.N01635 Erythranthe guttata HOM05D006036 ORTHO05D007736 2.6e-13 79.7 87 44.8
Ca_07819_v3 Cicer arietinum L. HOM05D006036 ORTHO05D007736 6.4e-12 75.1 96 45.8
Glyma.09G269100 Glycine max HOM05D006036 ORTHO05D007736 8.3e-12 74.7 97 40.2
Ca_19909_v3 Cicer arietinum L. HOM05D006036 ORTHO05D007736 1.0e-09 67.8 74 37.8
Nitab4.5_0000457g0290 Nicotiana tabacum HOM05D006036 ORTHO05D007736 1.3e-09 67.4 144 32.6
FAN06G1700 Fragaria x ananassa HOM05D006036 ORTHO05D007736 2.3e-09 66.6 96 45.8
Ciclev10033315m.g Citrus clementina HOM05D006036 ORTHO05D007736 1.9e-08 63.5 145 34.5
FAN06G2896 Fragaria x ananassa HOM05D006036 ORTHO05D007736 1.4e-06 57.4 82 45.1


User provided reference genes

Program Settings